BLASTX nr result

ID: Coptis23_contig00014426 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014426
         (663 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521893.1| lipid binding protein, putative [Ricinus com...   171   9e-41
gb|AFK35164.1| unknown [Medicago truncatula]                          164   1e-38
ref|XP_002281828.1| PREDICTED: uncharacterized protein LOC100264...   162   5e-38
ref|XP_002314750.1| predicted protein [Populus trichocarpa] gi|2...   160   2e-37
emb|CAN60832.1| hypothetical protein VITISV_004738 [Vitis vinifera]   158   1e-36

>ref|XP_002521893.1| lipid binding protein, putative [Ricinus communis]
           gi|223538931|gb|EEF40529.1| lipid binding protein,
           putative [Ricinus communis]
          Length = 120

 Score =  171 bits (434), Expect = 9e-41
 Identities = 77/120 (64%), Positives = 95/120 (79%)
 Frame = +1

Query: 34  MASISRTSYIAMTIFLLASYAHIKETKAAGECGRTPVNNAAASLSPCLGAAGSVSAKVPP 213
           M S  R  + A+ +FLLAS   + +  AAGECG+TP+ +AAASLSPCL A G+V A VPP
Sbjct: 1   MVSSMRACFAAVLVFLLASNGFLSDVDAAGECGKTPIRSAAASLSPCLTAVGNVRASVPP 60

Query: 214 LCCSKVAALLKNSPRCLCAVFLSPLVIKAGLKPAVAITIPKRCNISNRPIGKKCGRYTLP 393
            CCSKV AL+K +P+CLCAV LSPL ++AG+KP +AITIPKRCNI NRP+GKKCGRYT+P
Sbjct: 61  ACCSKVGALIKTAPKCLCAVLLSPLAMQAGIKPGIAITIPKRCNIKNRPVGKKCGRYTVP 120


>gb|AFK35164.1| unknown [Medicago truncatula]
          Length = 120

 Score =  164 bits (415), Expect = 1e-38
 Identities = 76/115 (66%), Positives = 92/115 (80%)
 Frame = +1

Query: 49  RTSYIAMTIFLLASYAHIKETKAAGECGRTPVNNAAASLSPCLGAAGSVSAKVPPLCCSK 228
           RT    + +FLLAS   I E++A GECGRTP+ +AAASLSPCLGA  +V AKVPP+CC++
Sbjct: 6   RTFLATVVMFLLASSVFILESEAVGECGRTPIGSAAASLSPCLGAVRNVRAKVPPVCCAR 65

Query: 229 VAALLKNSPRCLCAVFLSPLVIKAGLKPAVAITIPKRCNISNRPIGKKCGRYTLP 393
           V ALL+ SPRCLC+V LSPL  +A + PA+AIT+PKRCNI NRP GKKCGRYTLP
Sbjct: 66  VGALLRTSPRCLCSVLLSPLAKQAKINPAIAITVPKRCNIRNRPAGKKCGRYTLP 120


>ref|XP_002281828.1| PREDICTED: uncharacterized protein LOC100264479 [Vitis vinifera]
           gi|297737556|emb|CBI26757.3| unnamed protein product
           [Vitis vinifera]
          Length = 120

 Score =  162 bits (410), Expect = 5e-38
 Identities = 74/120 (61%), Positives = 91/120 (75%)
 Frame = +1

Query: 34  MASISRTSYIAMTIFLLASYAHIKETKAAGECGRTPVNNAAASLSPCLGAAGSVSAKVPP 213
           MAS   T + A+   +L S A ++E   AGECG+TP+ +AAASLS CL AAG+  AKVPP
Sbjct: 1   MASNMPTCFAAVMALMLVSQAFVQEANGAGECGKTPIQSAAASLSSCLSAAGNAKAKVPP 60

Query: 214 LCCSKVAALLKNSPRCLCAVFLSPLVIKAGLKPAVAITIPKRCNISNRPIGKKCGRYTLP 393
            CC+KV AL+  +P+CLCAV LSPL  KAG+KPA+AITIPKRCNI NRP+GKKCG Y +P
Sbjct: 61  TCCTKVTALINTAPKCLCAVVLSPLAKKAGIKPAIAITIPKRCNIKNRPVGKKCGSYIIP 120


>ref|XP_002314750.1| predicted protein [Populus trichocarpa] gi|222863790|gb|EEF00921.1|
           predicted protein [Populus trichocarpa]
          Length = 120

 Score =  160 bits (405), Expect = 2e-37
 Identities = 73/115 (63%), Positives = 90/115 (78%)
 Frame = +1

Query: 49  RTSYIAMTIFLLASYAHIKETKAAGECGRTPVNNAAASLSPCLGAAGSVSAKVPPLCCSK 228
           R   + + + L+AS A I +  AAGECG+TP+ +AAASLSPCLGAAG+  A VPP CCSK
Sbjct: 6   RAWVVTVLVVLVASNAFISDVNAAGECGKTPIRSAAASLSPCLGAAGNARAAVPPACCSK 65

Query: 229 VAALLKNSPRCLCAVFLSPLVIKAGLKPAVAITIPKRCNISNRPIGKKCGRYTLP 393
           V AL+K +P+CLCAV LSPL  +AG+KP +AITIPKRC+I NR  GKKCG+YTLP
Sbjct: 66  VTALIKTAPKCLCAVLLSPLAKQAGIKPGIAITIPKRCSIKNRQAGKKCGKYTLP 120


>emb|CAN60832.1| hypothetical protein VITISV_004738 [Vitis vinifera]
          Length = 441

 Score =  158 bits (399), Expect = 1e-36
 Identities = 76/137 (55%), Positives = 94/137 (68%)
 Frame = +1

Query: 34  MASISRTSYIAMTIFLLASYAHIKETKAAGECGRTPVNNAAASLSPCLGAAGSVSAKVPP 213
           MAS   T + A+   +L S A ++E   AGECG+TP+ +AAASLS CL AAG+  AKVPP
Sbjct: 1   MASNMPTCFAAVMALMLVSQAFVQEANGAGECGKTPIQSAAASLSSCLSAAGNAKAKVPP 60

Query: 214 LCCSKVAALLKNSPRCLCAVFLSPLVIKAGLKPAVAITIPKRCNISNRPIGKKCGRYTLP 393
            CC+KV AL+  +P+CLCAV LSPL  KAG+KPA+AITIPKRCNI NRP+GKKCG     
Sbjct: 61  TCCTKVTALINTAPKCLCAVVLSPLAKKAGIKPAIAITIPKRCNIKNRPVGKKCGT---- 116

Query: 394 RE*SCQFLSYHEAGLYI 444
               C     H  GL++
Sbjct: 117 ---QCPMHRAHRNGLWL 130


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