BLASTX nr result

ID: Coptis23_contig00014425 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014425
         (2262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525113.1| PREDICTED: uridylate kinase-like [Glycine max]    456   e-125
ref|XP_002883143.1| aspartate/glutamate/uridylate kinase family ...   455   e-125
ref|XP_002281894.1| PREDICTED: uridylate kinase-like [Vitis vini...   454   e-125
ref|NP_188498.1| uridylate kinase [Arabidopsis thaliana] gi|9293...   450   e-124
ref|XP_004148645.1| PREDICTED: uridylate kinase-like [Cucumis sa...   449   e-123

>ref|XP_003525113.1| PREDICTED: uridylate kinase-like [Glycine max]
          Length = 331

 Score =  456 bits (1172), Expect = e-125
 Identities = 240/308 (77%), Positives = 268/308 (87%)
 Frame = +1

Query: 1006 LFPCKLLRNVLKKTSTHGRLLVLKCSSSENGSMPADPINLRHPYISGNLTPFNFTTDEAA 1185
            LFP   L   +  +++H   L ++ S SE GS P +PIN R P I  +++    + +E+ 
Sbjct: 28   LFPSFTL--TVGNSTSHTTSLAVRSSYSEMGSSP-EPINFRKPGIP-SMSHLRLSMNES- 82

Query: 1186 NSKQSYKWRRVLLKVSGEALAGDQAQNIDPKITMSIAREVASVIRLGVEVAIVVGGGNIF 1365
             SK S+KWRRVLLKVSGEALAGD +QNIDPKITM+IAREVA+V RLG+EVA+VVGGGNIF
Sbjct: 83   -SKPSFKWRRVLLKVSGEALAGDHSQNIDPKITMAIAREVAAVTRLGIEVALVVGGGNIF 141

Query: 1366 RGASWAGCSGLDRSSADYIGMLATVMNAIFLQATMESIGIPTRVQTAFRMSEVAEPYIRR 1545
            RG+SWAG SGLDRSSADYIGMLATVMNAIFLQATMESIGIPTRVQTAFRMSEVAEPYIRR
Sbjct: 142  RGSSWAGSSGLDRSSADYIGMLATVMNAIFLQATMESIGIPTRVQTAFRMSEVAEPYIRR 201

Query: 1546 RAVRHLEKGRVVIFAAGTGNPFFTTDTAAALRCAEINAEVVLKATNVDGVFDDDPRRNPN 1725
            RAVRHLEKGRVVIFAAGTGNPFFTTDTAAALRCAEINAEVVLKATNVDGVFD+DP+RNP 
Sbjct: 202  RAVRHLEKGRVVIFAAGTGNPFFTTDTAAALRCAEINAEVVLKATNVDGVFDEDPKRNPQ 261

Query: 1726 ACLLDTLSYSDVTSRDLSVMDMTAITLCQENNIPVVVFNLNKPGNISKAIKGERVGTLIG 1905
            A L +TL+Y +VTS+DLSVMDMTAITLCQENNIPVVVFNLNKPGNI KAIKGERVGTLIG
Sbjct: 262  ARLHETLTYQEVTSKDLSVMDMTAITLCQENNIPVVVFNLNKPGNIEKAIKGERVGTLIG 321

Query: 1906 GTWNSNLA 1929
             TWNS ++
Sbjct: 322  ATWNSTVS 329


>ref|XP_002883143.1| aspartate/glutamate/uridylate kinase family protein [Arabidopsis
            lyrata subsp. lyrata] gi|297830524|ref|XP_002883144.1|
            aspartate/glutamate/uridylate kinase family protein
            [Arabidopsis lyrata subsp. lyrata]
            gi|297328983|gb|EFH59402.1| aspartate/glutamate/uridylate
            kinase family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297328984|gb|EFH59403.1| aspartate/glutamate/uridylate
            kinase family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 334

 Score =  455 bits (1170), Expect = e-125
 Identities = 232/287 (80%), Positives = 253/287 (88%)
 Frame = +1

Query: 1060 RLLVLKCSSSENGSMPADPINLRHPYISGNLTPFNFTTDEAANSKQSYKWRRVLLKVSGE 1239
            R +++ CSSS+NGS P       +       T F         SK   KWRRVLLKVSGE
Sbjct: 42   RRVLISCSSSDNGSSPDSMNGSGNGSSLNGQTSFPRMPSFDGASKPPLKWRRVLLKVSGE 101

Query: 1240 ALAGDQAQNIDPKITMSIAREVASVIRLGVEVAIVVGGGNIFRGASWAGCSGLDRSSADY 1419
            ALAGD+ QNIDPK+TM+IAREVA+V RLG+EVAIVVGGGNIFRG++WAGCSGLDRSSADY
Sbjct: 102  ALAGDEEQNIDPKVTMAIAREVAAVTRLGIEVAIVVGGGNIFRGSTWAGCSGLDRSSADY 161

Query: 1420 IGMLATVMNAIFLQATMESIGIPTRVQTAFRMSEVAEPYIRRRAVRHLEKGRVVIFAAGT 1599
            IGMLATVMNAIFLQATMESIGIPTRVQTAFRMSEVAEPYIRRRA+RHLEKGRVVIFAAGT
Sbjct: 162  IGMLATVMNAIFLQATMESIGIPTRVQTAFRMSEVAEPYIRRRAIRHLEKGRVVIFAAGT 221

Query: 1600 GNPFFTTDTAAALRCAEINAEVVLKATNVDGVFDDDPRRNPNACLLDTLSYSDVTSRDLS 1779
            GNPFFTTDTAAALRCAEINAEVVLKATNVDGVFDDDP+RNPNA LLD+L+Y +VTS+DLS
Sbjct: 222  GNPFFTTDTAAALRCAEINAEVVLKATNVDGVFDDDPKRNPNARLLDSLTYQEVTSKDLS 281

Query: 1780 VMDMTAITLCQENNIPVVVFNLNKPGNISKAIKGERVGTLIGGTWNS 1920
            VMDMTAITLCQENNIPVVVFNL++PGNI+KAIKGERVGTLIGGTWNS
Sbjct: 282  VMDMTAITLCQENNIPVVVFNLSEPGNIAKAIKGERVGTLIGGTWNS 328


>ref|XP_002281894.1| PREDICTED: uridylate kinase-like [Vitis vinifera]
          Length = 332

 Score =  454 bits (1167), Expect = e-125
 Identities = 238/293 (81%), Positives = 258/293 (88%)
 Frame = +1

Query: 1051 THGRLLVLKCSSSENGSMPADPINLRHPYISGNLTPFNFTTDEAANSKQSYKWRRVLLKV 1230
            T+GR  V+  SSSE GS+  D +NLR   +S ++TP   T ++A  SK S KW+RVLLKV
Sbjct: 41   TNGRF-VINSSSSEMGSIN-DSMNLRQSQLS-SMTPLGVTMNDAGMSKPSCKWQRVLLKV 97

Query: 1231 SGEALAGDQAQNIDPKITMSIAREVASVIRLGVEVAIVVGGGNIFRGASWAGCSGLDRSS 1410
            SGEALAGD  QNIDPKITM+IAREVASV RLG+EVAIVVGGGNIFRG+SWAG  GLDRSS
Sbjct: 98   SGEALAGDHTQNIDPKITMAIAREVASVTRLGIEVAIVVGGGNIFRGSSWAGSGGLDRSS 157

Query: 1411 ADYIGMLATVMNAIFLQATMESIGIPTRVQTAFRMSEVAEPYIRRRAVRHLEKGRVVIFA 1590
            ADYIGMLATVMNAIFLQATMESIGIPTRVQTAFRMSEVAEPYIRRRA+RHLEKGRVVIFA
Sbjct: 158  ADYIGMLATVMNAIFLQATMESIGIPTRVQTAFRMSEVAEPYIRRRAIRHLEKGRVVIFA 217

Query: 1591 AGTGNPFFTTDTAAALRCAEINAEVVLKATNVDGVFDDDPRRNPNACLLDTLSYSDVTSR 1770
            AGTGNPFFTTDTAAALRCAEINAEVVLKATNVDGVFDDDPRRNPNA LLD+L+Y DV SR
Sbjct: 218  AGTGNPFFTTDTAAALRCAEINAEVVLKATNVDGVFDDDPRRNPNARLLDSLTYQDVLSR 277

Query: 1771 DLSVMDMTAITLCQENNIPVVVFNLNKPGNISKAIKGERVGTLIGGTWNSNLA 1929
            DLSVMDMTA+TLCQENNIPVVVFN+ K GNIS+AI GERVGTL+GG W S  A
Sbjct: 278  DLSVMDMTAVTLCQENNIPVVVFNVTKSGNISRAILGERVGTLVGGPWVSTTA 330


>ref|NP_188498.1| uridylate kinase [Arabidopsis thaliana] gi|9293891|dbj|BAB01794.1|
            unnamed protein product [Arabidopsis thaliana]
            gi|15292789|gb|AAK92763.1| putative uridylate kinase
            [Arabidopsis thaliana] gi|20258857|gb|AAM14100.1|
            putative uridylate kinase [Arabidopsis thaliana]
            gi|332642610|gb|AEE76131.1| uridylate kinase [Arabidopsis
            thaliana]
          Length = 339

 Score =  450 bits (1157), Expect = e-124
 Identities = 236/309 (76%), Positives = 260/309 (84%), Gaps = 6/309 (1%)
 Frame = +1

Query: 1012 PCKLLRNVLKKTSTHGRLLVLKCSSS---ENGSMPADPINLRHPYISGNL---TPFNFTT 1173
            P  L          + R +++ CSSS   +NGS P D +N        +L   + F    
Sbjct: 26   PLTLRNRTFFSNQNYSRRVLISCSSSLSSDNGSSP-DSMNGNGNGNGSSLNGQSSFPRLP 84

Query: 1174 DEAANSKQSYKWRRVLLKVSGEALAGDQAQNIDPKITMSIAREVASVIRLGVEVAIVVGG 1353
                 SK   KWRRVLLKVSGEALAGD+ QNIDPK+TM+IAREVA+V RLG+EVAIVVGG
Sbjct: 85   SFDGTSKPPLKWRRVLLKVSGEALAGDEEQNIDPKVTMAIAREVAAVTRLGIEVAIVVGG 144

Query: 1354 GNIFRGASWAGCSGLDRSSADYIGMLATVMNAIFLQATMESIGIPTRVQTAFRMSEVAEP 1533
            GNIFRG++WAGCSGLDRSSADYIGMLATVMNAIFLQATMESIGIPTRVQTAFRMSEVAEP
Sbjct: 145  GNIFRGSTWAGCSGLDRSSADYIGMLATVMNAIFLQATMESIGIPTRVQTAFRMSEVAEP 204

Query: 1534 YIRRRAVRHLEKGRVVIFAAGTGNPFFTTDTAAALRCAEINAEVVLKATNVDGVFDDDPR 1713
            YIRRRA+RHLEKGRVVIFAAGTGNPFFTTDTAAALRCAEINAEVVLKATNVDGVFDDDP+
Sbjct: 205  YIRRRAIRHLEKGRVVIFAAGTGNPFFTTDTAAALRCAEINAEVVLKATNVDGVFDDDPK 264

Query: 1714 RNPNACLLDTLSYSDVTSRDLSVMDMTAITLCQENNIPVVVFNLNKPGNISKAIKGERVG 1893
            RNPNA LLD+L+Y +VTS+DLSVMDMTAITLCQENNIPVVVFNL++PGNI+KAIKGERVG
Sbjct: 265  RNPNARLLDSLTYQEVTSKDLSVMDMTAITLCQENNIPVVVFNLSEPGNIAKAIKGERVG 324

Query: 1894 TLIGGTWNS 1920
            TLIGGTWNS
Sbjct: 325  TLIGGTWNS 333


>ref|XP_004148645.1| PREDICTED: uridylate kinase-like [Cucumis sativus]
            gi|449507502|ref|XP_004163050.1| PREDICTED: uridylate
            kinase-like [Cucumis sativus]
          Length = 341

 Score =  449 bits (1154), Expect = e-123
 Identities = 226/261 (86%), Positives = 245/261 (93%)
 Frame = +1

Query: 1150 LTPFNFTTDEAANSKQSYKWRRVLLKVSGEALAGDQAQNIDPKITMSIAREVASVIRLGV 1329
            ++P   T  EA+ S  SYKWRRVLLKVSGEALAGD+ QNIDPK+TM+IAREVA+V RLG+
Sbjct: 80   ISPGGMTISEASMSMPSYKWRRVLLKVSGEALAGDRLQNIDPKVTMAIAREVAAVTRLGI 139

Query: 1330 EVAIVVGGGNIFRGASWAGCSGLDRSSADYIGMLATVMNAIFLQATMESIGIPTRVQTAF 1509
            EVAIVVGGGNIFRG+SWAG SGLDRSSADYIGMLATVMNAIFLQATMESIGIPTRVQTAF
Sbjct: 140  EVAIVVGGGNIFRGSSWAGSSGLDRSSADYIGMLATVMNAIFLQATMESIGIPTRVQTAF 199

Query: 1510 RMSEVAEPYIRRRAVRHLEKGRVVIFAAGTGNPFFTTDTAAALRCAEINAEVVLKATNVD 1689
            RMSEVAEPYIRRRAVRHLEKGRVVIFAAGTGNPFFTTDTAAALRCAEINAEV+LKATNVD
Sbjct: 200  RMSEVAEPYIRRRAVRHLEKGRVVIFAAGTGNPFFTTDTAAALRCAEINAEVLLKATNVD 259

Query: 1690 GVFDDDPRRNPNACLLDTLSYSDVTSRDLSVMDMTAITLCQENNIPVVVFNLNKPGNISK 1869
            GV+DDDPR+NPNA LL+TL+Y +VTS+DLSVMDMTAITLCQENNIPVVVFNL KP NI+K
Sbjct: 260  GVYDDDPRQNPNARLLETLTYQEVTSKDLSVMDMTAITLCQENNIPVVVFNLTKPDNITK 319

Query: 1870 AIKGERVGTLIGGTWNSNLAN 1932
            AIKGERVGTLIGGTWNS +A+
Sbjct: 320  AIKGERVGTLIGGTWNSMVAS 340


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