BLASTX nr result

ID: Coptis23_contig00014421 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014421
         (632 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37381.3| unnamed protein product [Vitis vinifera]              330   1e-88
ref|XP_002263738.1| PREDICTED: DNA replication licensing factor ...   330   1e-88
ref|XP_004137058.1| PREDICTED: DNA helicase MCM9-like [Cucumis s...   325   4e-87
ref|XP_002325759.1| predicted protein [Populus trichocarpa] gi|2...   321   6e-86
ref|XP_002525825.1| Minichromosome maintenance protein MCM, puta...   318   4e-85

>emb|CBI37381.3| unnamed protein product [Vitis vinifera]
          Length = 665

 Score =  330 bits (847), Expect = 1e-88
 Identities = 164/210 (78%), Positives = 183/210 (87%)
 Frame = +1

Query: 1   SGSPLECAESFPGIGRVRVKHRGILLTLKGTVIRSGTIKMIEGEREYECRKCKHKFKVYP 180
           SGSPLE  E+FP IGRVRVKH GILLTLKGTVIRSG IKMIEGER+YECRKCKH FKVYP
Sbjct: 104 SGSPLEFPETFPSIGRVRVKHHGILLTLKGTVIRSGGIKMIEGERKYECRKCKHIFKVYP 163

Query: 181 ELETGNSIRHPTSCPSQRSRACEGTSFQFVEGSIVCHDYQEIKIQESTQVLSVGSIPRSM 360
           ELET N+I  P+SCPSQ+   C GT+FQ VE SI+ HDYQEIKIQES QVL VG+IPRS+
Sbjct: 164 ELETRNAILLPSSCPSQK---CAGTNFQLVEDSIIRHDYQEIKIQESVQVLGVGAIPRSI 220

Query: 361 PVILKDDLVDIVKAGDSVIVTGILTAKWSSDLKDVRCDLDPTLVANYVRRTNELKSEIDI 540
           PVIL+DDLVDIVKAGD +IVTGILTAKWSSDLKDVRCDLDP L+AN+VRRTNEL+S++DI
Sbjct: 221 PVILQDDLVDIVKAGDDIIVTGILTAKWSSDLKDVRCDLDPVLIANHVRRTNELRSDMDI 280

Query: 541 PDDLENKFKDFWSEHKYAPLKGRNVILRGI 630
           PD++  KFK FWS+ K  PLKGRN ILRGI
Sbjct: 281 PDEVIMKFKQFWSDFKDTPLKGRNAILRGI 310


>ref|XP_002263738.1| PREDICTED: DNA replication licensing factor MCM9-like [Vitis
           vinifera]
          Length = 644

 Score =  330 bits (847), Expect = 1e-88
 Identities = 164/210 (78%), Positives = 183/210 (87%)
 Frame = +1

Query: 1   SGSPLECAESFPGIGRVRVKHRGILLTLKGTVIRSGTIKMIEGEREYECRKCKHKFKVYP 180
           SGSPLE  E+FP IGRVRVKH GILLTLKGTVIRSG IKMIEGER+YECRKCKH FKVYP
Sbjct: 104 SGSPLEFPETFPSIGRVRVKHHGILLTLKGTVIRSGGIKMIEGERKYECRKCKHIFKVYP 163

Query: 181 ELETGNSIRHPTSCPSQRSRACEGTSFQFVEGSIVCHDYQEIKIQESTQVLSVGSIPRSM 360
           ELET N+I  P+SCPSQ+   C GT+FQ VE SI+ HDYQEIKIQES QVL VG+IPRS+
Sbjct: 164 ELETRNAILLPSSCPSQK---CAGTNFQLVEDSIIRHDYQEIKIQESVQVLGVGAIPRSI 220

Query: 361 PVILKDDLVDIVKAGDSVIVTGILTAKWSSDLKDVRCDLDPTLVANYVRRTNELKSEIDI 540
           PVIL+DDLVDIVKAGD +IVTGILTAKWSSDLKDVRCDLDP L+AN+VRRTNEL+S++DI
Sbjct: 221 PVILQDDLVDIVKAGDDIIVTGILTAKWSSDLKDVRCDLDPVLIANHVRRTNELRSDMDI 280

Query: 541 PDDLENKFKDFWSEHKYAPLKGRNVILRGI 630
           PD++  KFK FWS+ K  PLKGRN ILRGI
Sbjct: 281 PDEVIMKFKQFWSDFKDTPLKGRNAILRGI 310


>ref|XP_004137058.1| PREDICTED: DNA helicase MCM9-like [Cucumis sativus]
          Length = 649

 Score =  325 bits (833), Expect = 4e-87
 Identities = 158/210 (75%), Positives = 180/210 (85%)
 Frame = +1

Query: 1   SGSPLECAESFPGIGRVRVKHRGILLTLKGTVIRSGTIKMIEGEREYECRKCKHKFKVYP 180
           +GSPLE  E+FP IG VRVKH G+LLTLKGTVIRSG IKM EGER Y CRKCKHKF VYP
Sbjct: 109 TGSPLEFPETFPSIGSVRVKHHGVLLTLKGTVIRSGAIKMYEGERWYICRKCKHKFPVYP 168

Query: 181 ELETGNSIRHPTSCPSQRSRACEGTSFQFVEGSIVCHDYQEIKIQESTQVLSVGSIPRSM 360
           ELET NSI+ P+ CPSQRS+ CEG SF+ +EGS+V HDYQEIKIQESTQVL VGSIPRS+
Sbjct: 169 ELETRNSIQLPSFCPSQRSKPCEGKSFECLEGSVVRHDYQEIKIQESTQVLGVGSIPRSV 228

Query: 361 PVILKDDLVDIVKAGDSVIVTGILTAKWSSDLKDVRCDLDPTLVANYVRRTNELKSEIDI 540
            +ILKDDLVD+VKAGD VIV+G+L+AKWS DLKDVRCDLDP L+AN+VRRTNELK+E+DI
Sbjct: 229 LIILKDDLVDLVKAGDDVIVSGVLSAKWSPDLKDVRCDLDPMLIANHVRRTNELKAEVDI 288

Query: 541 PDDLENKFKDFWSEHKYAPLKGRNVILRGI 630
           PDD+  +F  FWS+ K  PLKGRN ILRGI
Sbjct: 289 PDDIIMQFTQFWSDFKDTPLKGRNAILRGI 318


>ref|XP_002325759.1| predicted protein [Populus trichocarpa] gi|222862634|gb|EEF00141.1|
           predicted protein [Populus trichocarpa]
          Length = 738

 Score =  321 bits (823), Expect = 6e-86
 Identities = 156/209 (74%), Positives = 177/209 (84%)
 Frame = +1

Query: 4   GSPLECAESFPGIGRVRVKHRGILLTLKGTVIRSGTIKMIEGEREYECRKCKHKFKVYPE 183
           GSPLEC E+FP IGRVRVKHRGILLTLKGT+IRSG IKM EGER Y+CRKCKH F V+PE
Sbjct: 112 GSPLECPETFPSIGRVRVKHRGILLTLKGTLIRSGAIKMYEGERMYQCRKCKHVFPVHPE 171

Query: 184 LETGNSIRHPTSCPSQRSRACEGTSFQFVEGSIVCHDYQEIKIQESTQVLSVGSIPRSMP 363
           LE+ NSI  P+ CPSQRS++CEGT F  V+ S++ HDYQEIKIQESTQVL VG IPRS+P
Sbjct: 172 LESRNSITLPSFCPSQRSKSCEGTRFDCVDESVIRHDYQEIKIQESTQVLGVGVIPRSIP 231

Query: 364 VILKDDLVDIVKAGDSVIVTGILTAKWSSDLKDVRCDLDPTLVANYVRRTNELKSEIDIP 543
           VIL DDLVDIVK GD +IVTGILTAKWS DLKDVR +LDP L+ANYVRRTNELK++IDIP
Sbjct: 232 VILMDDLVDIVKTGDDIIVTGILTAKWSPDLKDVRSNLDPVLIANYVRRTNELKADIDIP 291

Query: 544 DDLENKFKDFWSEHKYAPLKGRNVILRGI 630
           +D+  KFK FWS+    PLKGRN ILRG+
Sbjct: 292 NDVIMKFKQFWSDFNDTPLKGRNAILRGL 320


>ref|XP_002525825.1| Minichromosome maintenance protein MCM, putative [Ricinus communis]
           gi|223534830|gb|EEF36519.1| Minichromosome maintenance
           protein MCM, putative [Ricinus communis]
          Length = 644

 Score =  318 bits (816), Expect = 4e-85
 Identities = 158/210 (75%), Positives = 176/210 (83%)
 Frame = +1

Query: 1   SGSPLECAESFPGIGRVRVKHRGILLTLKGTVIRSGTIKMIEGEREYECRKCKHKFKVYP 180
           SGSPLEC E+FP IGRVRVKHRGILLTLKGTVIRSG IKM EGER Y CRKCK +F VYP
Sbjct: 107 SGSPLECPETFPSIGRVRVKHRGILLTLKGTVIRSGAIKMYEGERMYRCRKCKQEFPVYP 166

Query: 181 ELETGNSIRHPTSCPSQRSRACEGTSFQFVEGSIVCHDYQEIKIQESTQVLSVGSIPRSM 360
           ELE+ NSI  P+ CPS RS+ CEG  F  V+ +++ HDYQEIKIQESTQVL VG IPRS+
Sbjct: 167 ELESRNSITLPSFCPSLRSKPCEGARFDCVDDTVIRHDYQEIKIQESTQVLGVGVIPRSI 226

Query: 361 PVILKDDLVDIVKAGDSVIVTGILTAKWSSDLKDVRCDLDPTLVANYVRRTNELKSEIDI 540
           PVIL DDLVDIVKAGD VIVTGILTAKWS DLKDVRC+LDP LVAN+VRR+NELKS+IDI
Sbjct: 227 PVILTDDLVDIVKAGDDVIVTGILTAKWSPDLKDVRCNLDPVLVANHVRRSNELKSDIDI 286

Query: 541 PDDLENKFKDFWSEHKYAPLKGRNVILRGI 630
           P D+  KF+ FWS+ K  PLKGRN IL+GI
Sbjct: 287 PRDVIMKFEQFWSDLKDTPLKGRNTILQGI 316


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