BLASTX nr result
ID: Coptis23_contig00014420
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00014420
(225 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002309132.1| predicted protein [Populus trichocarpa] gi|2... 102 3e-20
ref|XP_002274540.2| PREDICTED: probable LRR receptor-like serine... 102 4e-20
emb|CAN83822.1| hypothetical protein VITISV_030954 [Vitis vinifera] 102 4e-20
ref|XP_002317009.1| predicted protein [Populus trichocarpa] gi|2... 100 2e-19
ref|XP_002324325.1| predicted protein [Populus trichocarpa] gi|2... 99 3e-19
>ref|XP_002309132.1| predicted protein [Populus trichocarpa] gi|222855108|gb|EEE92655.1|
predicted protein [Populus trichocarpa]
Length = 1034
Score = 102 bits (255), Expect = 3e-20
Identities = 48/75 (64%), Positives = 58/75 (77%)
Frame = -1
Query: 225 GNCLTLTSLHMDGNFFQGSVPKSLSSLRGLEYFDLSRNNLSGEIPKFLGGFPLLMLNLSF 46
G+C+TL LHM GNFF+G++P S SSLRGL DLSRNNLSG+IP+FL L+ LNLSF
Sbjct: 540 GSCVTLEKLHMQGNFFEGAIPPSFSSLRGLRDMDLSRNNLSGQIPQFLKRLALISLNLSF 599
Query: 45 NQFEGQVPDDGVFGN 1
N FEG+VP +G F N
Sbjct: 600 NHFEGEVPREGAFLN 614
Score = 58.9 bits (141), Expect = 4e-07
Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Frame = -1
Query: 225 GNCLTLTSLHMDGNFFQGSVPKSLSSLRGLEYFDLSRNNLSGEIPKFLGG-FPLLMLNLS 49
GN L + ++ N+F G +P+ + L L+Y + S N+ SGEIP L G LLML L
Sbjct: 100 GNMSFLRGISLEQNYFHGEIPQEIGRLDRLKYINFSNNSFSGEIPANLSGCSSLLMLRLG 159
Query: 48 FNQFEGQVP 22
FN+ GQ+P
Sbjct: 160 FNKLTGQIP 168
>ref|XP_002274540.2| PREDICTED: probable LRR receptor-like serine/threonine-protein
kinase At3g47570-like [Vitis vinifera]
Length = 1040
Score = 102 bits (253), Expect = 4e-20
Identities = 50/75 (66%), Positives = 57/75 (76%)
Frame = -1
Query: 225 GNCLTLTSLHMDGNFFQGSVPKSLSSLRGLEYFDLSRNNLSGEIPKFLGGFPLLMLNLSF 46
G+CLTL LHM+GNFF+GS+P S SLRGL DLSRNNLSG+IP+FL L LNLSF
Sbjct: 543 GSCLTLEHLHMEGNFFKGSIPPSFISLRGLLDLDLSRNNLSGQIPEFLQQLSLSNLNLSF 602
Query: 45 NQFEGQVPDDGVFGN 1
N FEGQ+P GVF N
Sbjct: 603 NNFEGQLPTKGVFNN 617
Score = 55.8 bits (133), Expect = 4e-06
Identities = 28/70 (40%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Frame = -1
Query: 225 GNCLTLTSLHMDGNFFQGSVPKSLSSLRGLEYFDLSRNNLSGEIPKFLGGFP-LLMLNLS 49
G L +L++ N F G +P +LS L YF L NNL G IP +LG +P ++ + L
Sbjct: 126 GRLSRLRALNLTNNSFSGEIPANLSRCSNLVYFRLGFNNLIGRIPSWLGSYPKVVRMQLH 185
Query: 48 FNQFEGQVPD 19
+N G VPD
Sbjct: 186 YNNLTGPVPD 195
Score = 55.5 bits (132), Expect = 5e-06
Identities = 33/76 (43%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Frame = -1
Query: 225 GNCLTLTSLHMDGNFFQGSVPKSLSSLRGLEYFDLSRNNLSGEIPKFLGGFP-LLMLNLS 49
GN + LT L + N F GS+P + +L+ L DLSRN LSG IP LG L L+L
Sbjct: 398 GNLVNLTDLILANNDFTGSIPVLIGNLQMLGRIDLSRNQLSGHIPSSLGNITRLYSLHLQ 457
Query: 48 FNQFEGQVPDDGVFGN 1
N G++P FGN
Sbjct: 458 NNHLSGKIPSS--FGN 471
>emb|CAN83822.1| hypothetical protein VITISV_030954 [Vitis vinifera]
Length = 1904
Score = 102 bits (253), Expect = 4e-20
Identities = 50/75 (66%), Positives = 57/75 (76%)
Frame = -1
Query: 225 GNCLTLTSLHMDGNFFQGSVPKSLSSLRGLEYFDLSRNNLSGEIPKFLGGFPLLMLNLSF 46
G+CLTL LHM+GNFF+GS+P S SLRGL DLSRNNLSG+IP+FL L LNLSF
Sbjct: 574 GSCLTLEHLHMEGNFFKGSIPPSFISLRGLLDLDLSRNNLSGQIPEFLQQLSLSNLNLSF 633
Query: 45 NQFEGQVPDDGVFGN 1
N FEGQ+P GVF N
Sbjct: 634 NNFEGQLPTKGVFNN 648
Score = 92.8 bits (229), Expect = 3e-17
Identities = 44/75 (58%), Positives = 55/75 (73%)
Frame = -1
Query: 225 GNCLTLTSLHMDGNFFQGSVPKSLSSLRGLEYFDLSRNNLSGEIPKFLGGFPLLMLNLSF 46
G+C+ L L+M N F G +P+SL++LRGLE DLS NNLSGEIP++L PL LNLS
Sbjct: 1482 GSCIRLERLYMYDNSFGGDIPQSLNTLRGLEELDLSHNNLSGEIPRYLATIPLRNLNLSL 1541
Query: 45 NQFEGQVPDDGVFGN 1
N FEG++P DGVF N
Sbjct: 1542 NDFEGEIPVDGVFRN 1556
Score = 55.8 bits (133), Expect = 4e-06
Identities = 28/70 (40%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Frame = -1
Query: 225 GNCLTLTSLHMDGNFFQGSVPKSLSSLRGLEYFDLSRNNLSGEIPKFLGGFP-LLMLNLS 49
G L +L++ N F G +P +LS L YF L NNL G IP +LG +P ++ + L
Sbjct: 157 GRLSRLRALNLTNNSFSGEIPANLSRCSNLVYFRLGFNNLIGRIPSWLGSYPKVVRMQLH 216
Query: 48 FNQFEGQVPD 19
+N G VPD
Sbjct: 217 YNNLTGPVPD 226
Score = 55.5 bits (132), Expect = 5e-06
Identities = 33/76 (43%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Frame = -1
Query: 225 GNCLTLTSLHMDGNFFQGSVPKSLSSLRGLEYFDLSRNNLSGEIPKFLGGFP-LLMLNLS 49
GN + LT L + N F GS+P + +L+ L DLSRN LSG IP LG L L+L
Sbjct: 429 GNLVNLTDLILANNDFTGSIPVLIGNLQMLGRIDLSRNQLSGHIPSSLGNITRLYSLHLQ 488
Query: 48 FNQFEGQVPDDGVFGN 1
N G++P FGN
Sbjct: 489 NNHLSGKIPSS--FGN 502
>ref|XP_002317009.1| predicted protein [Populus trichocarpa] gi|222860074|gb|EEE97621.1|
predicted protein [Populus trichocarpa]
Length = 1017
Score = 100 bits (248), Expect = 2e-19
Identities = 47/74 (63%), Positives = 56/74 (75%)
Frame = -1
Query: 222 NCLTLTSLHMDGNFFQGSVPKSLSSLRGLEYFDLSRNNLSGEIPKFLGGFPLLMLNLSFN 43
+C +L L+M NFFQGS+P S S+LRG++ DLS NNLSG+IPKFL F LL LNLSFN
Sbjct: 543 SCTSLEYLYMQHNFFQGSIPSSFSTLRGIQKLDLSHNNLSGQIPKFLDTFALLTLNLSFN 602
Query: 42 QFEGQVPDDGVFGN 1
FEG+VP G FGN
Sbjct: 603 DFEGEVPTKGAFGN 616
>ref|XP_002324325.1| predicted protein [Populus trichocarpa] gi|222865759|gb|EEF02890.1|
predicted protein [Populus trichocarpa]
Length = 1026
Score = 99.4 bits (246), Expect = 3e-19
Identities = 45/75 (60%), Positives = 56/75 (74%)
Frame = -1
Query: 225 GNCLTLTSLHMDGNFFQGSVPKSLSSLRGLEYFDLSRNNLSGEIPKFLGGFPLLMLNLSF 46
G C +L LHM+ NFFQGS+P S SSLRG+++ DLS NNLSG++P FL P + LNLS+
Sbjct: 536 GGCTSLEVLHMEDNFFQGSIPSSFSSLRGIQFLDLSCNNLSGQLPNFLVTIPFISLNLSY 595
Query: 45 NQFEGQVPDDGVFGN 1
N FEG+VP GVF N
Sbjct: 596 NNFEGEVPRKGVFTN 610
Score = 58.9 bits (141), Expect = 4e-07
Identities = 32/69 (46%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Frame = -1
Query: 225 GNCLTLTSLHMDGNFFQGSVPKSLSSLRGLEYFDLSRNNLSGEIPKFLGGFPLL-MLNLS 49
GN + LT L+MD N F G +P S +LR LE F L N LSG+IP LG LL +L L
Sbjct: 391 GNLVNLTFLYMDRNHFTGEIPTSFGNLRKLEQFSLFSNRLSGKIPSSLGNLSLLSVLYLD 450
Query: 48 FNQFEGQVP 22
N+ + +P
Sbjct: 451 DNKLKDTIP 459