BLASTX nr result
ID: Coptis23_contig00014412
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00014412 (214 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAK06361.1| predicted protein [Hordeum vulgare subsp. vulgare] 60 2e-07 ref|XP_002986706.1| hypothetical protein SELMODRAFT_124475 [Sela... 59 5e-07 gb|EAY98674.1| hypothetical protein OsI_20602 [Oryza sativa Indi... 59 5e-07 emb|CAN70569.1| hypothetical protein VITISV_037497 [Vitis vinifera] 57 1e-06 ref|XP_002264515.1| PREDICTED: mitochondrial import inner membra... 57 2e-06 >dbj|BAK06361.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 381 Score = 59.7 bits (143), Expect = 2e-07 Identities = 31/63 (49%), Positives = 41/63 (65%) Frame = +3 Query: 3 LEEGDTELVDLLPFLEFVGLRRQEDTRAILASYKGFDIASEFNKHQSKRKSFFGRP*KQN 182 LE DTEL+DL+PFLE++ + R D RA+LASY+G D+A EF K + + R KQ Sbjct: 317 LEIDDTELLDLIPFLEYLAMARPSDIRAVLASYQGHDVAKEFRKRNKELERH--RQEKQQ 374 Query: 183 RDS 191 R S Sbjct: 375 RKS 377 >ref|XP_002986706.1| hypothetical protein SELMODRAFT_124475 [Selaginella moellendorffii] gi|302818100|ref|XP_002990724.1| hypothetical protein SELMODRAFT_132250 [Selaginella moellendorffii] gi|300141462|gb|EFJ08173.1| hypothetical protein SELMODRAFT_132250 [Selaginella moellendorffii] gi|300145594|gb|EFJ12269.1| hypothetical protein SELMODRAFT_124475 [Selaginella moellendorffii] Length = 202 Score = 58.5 bits (140), Expect = 5e-07 Identities = 28/52 (53%), Positives = 35/52 (67%) Frame = +3 Query: 3 LEEGDTELVDLLPFLEFVGLRRQEDTRAILASYKGFDIASEFNKHQSKRKSF 158 LE DT L+DLLPFLEFV +R D R +L SYKG DIA+EF + + + F Sbjct: 145 LESDDTALLDLLPFLEFVARQRPPDVRTVLESYKGRDIATEFRERAKQNQRF 196 >gb|EAY98674.1| hypothetical protein OsI_20602 [Oryza sativa Indica Group] Length = 376 Score = 58.5 bits (140), Expect = 5e-07 Identities = 26/52 (50%), Positives = 38/52 (73%) Frame = +3 Query: 3 LEEGDTELVDLLPFLEFVGLRRQEDTRAILASYKGFDIASEFNKHQSKRKSF 158 LE DT+L+DL+PFLE+V + R D R +LASY+G D+A+EF + + +SF Sbjct: 302 LETDDTQLLDLIPFLEYVAMVRPSDIRTVLASYQGRDVAAEFIERSKEHQSF 353 >emb|CAN70569.1| hypothetical protein VITISV_037497 [Vitis vinifera] Length = 105 Score = 57.4 bits (137), Expect = 1e-06 Identities = 27/51 (52%), Positives = 36/51 (70%) Frame = +3 Query: 3 LEEGDTELVDLLPFLEFVGLRRQEDTRAILASYKGFDIASEFNKHQSKRKS 155 LEE DT+L+DL+PFLE+V R D R +LASY+G DIA EF + + +S Sbjct: 41 LEEDDTQLLDLIPFLEYVARNRPADIRPVLASYQGHDIAKEFIERSKEYQS 91 >ref|XP_002264515.1| PREDICTED: mitochondrial import inner membrane translocase subunit TIM50 [Vitis vinifera] gi|296089900|emb|CBI39719.3| unnamed protein product [Vitis vinifera] Length = 371 Score = 56.6 bits (135), Expect = 2e-06 Identities = 26/42 (61%), Positives = 32/42 (76%) Frame = +3 Query: 3 LEEGDTELVDLLPFLEFVGLRRQEDTRAILASYKGFDIASEF 128 LEE DT+L+DL+PFLE+V R D R +LASY+G DIA EF Sbjct: 307 LEEDDTQLLDLIPFLEYVARNRPADIRPVLASYQGHDIAKEF 348