BLASTX nr result

ID: Coptis23_contig00014412 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014412
         (214 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAK06361.1| predicted protein [Hordeum vulgare subsp. vulgare]     60   2e-07
ref|XP_002986706.1| hypothetical protein SELMODRAFT_124475 [Sela...    59   5e-07
gb|EAY98674.1| hypothetical protein OsI_20602 [Oryza sativa Indi...    59   5e-07
emb|CAN70569.1| hypothetical protein VITISV_037497 [Vitis vinifera]    57   1e-06
ref|XP_002264515.1| PREDICTED: mitochondrial import inner membra...    57   2e-06

>dbj|BAK06361.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 381

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 31/63 (49%), Positives = 41/63 (65%)
 Frame = +3

Query: 3   LEEGDTELVDLLPFLEFVGLRRQEDTRAILASYKGFDIASEFNKHQSKRKSFFGRP*KQN 182
           LE  DTEL+DL+PFLE++ + R  D RA+LASY+G D+A EF K   + +    R  KQ 
Sbjct: 317 LEIDDTELLDLIPFLEYLAMARPSDIRAVLASYQGHDVAKEFRKRNKELERH--RQEKQQ 374

Query: 183 RDS 191
           R S
Sbjct: 375 RKS 377


>ref|XP_002986706.1| hypothetical protein SELMODRAFT_124475 [Selaginella moellendorffii]
           gi|302818100|ref|XP_002990724.1| hypothetical protein
           SELMODRAFT_132250 [Selaginella moellendorffii]
           gi|300141462|gb|EFJ08173.1| hypothetical protein
           SELMODRAFT_132250 [Selaginella moellendorffii]
           gi|300145594|gb|EFJ12269.1| hypothetical protein
           SELMODRAFT_124475 [Selaginella moellendorffii]
          Length = 202

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 28/52 (53%), Positives = 35/52 (67%)
 Frame = +3

Query: 3   LEEGDTELVDLLPFLEFVGLRRQEDTRAILASYKGFDIASEFNKHQSKRKSF 158
           LE  DT L+DLLPFLEFV  +R  D R +L SYKG DIA+EF +   + + F
Sbjct: 145 LESDDTALLDLLPFLEFVARQRPPDVRTVLESYKGRDIATEFRERAKQNQRF 196


>gb|EAY98674.1| hypothetical protein OsI_20602 [Oryza sativa Indica Group]
          Length = 376

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 26/52 (50%), Positives = 38/52 (73%)
 Frame = +3

Query: 3   LEEGDTELVDLLPFLEFVGLRRQEDTRAILASYKGFDIASEFNKHQSKRKSF 158
           LE  DT+L+DL+PFLE+V + R  D R +LASY+G D+A+EF +   + +SF
Sbjct: 302 LETDDTQLLDLIPFLEYVAMVRPSDIRTVLASYQGRDVAAEFIERSKEHQSF 353


>emb|CAN70569.1| hypothetical protein VITISV_037497 [Vitis vinifera]
          Length = 105

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 27/51 (52%), Positives = 36/51 (70%)
 Frame = +3

Query: 3   LEEGDTELVDLLPFLEFVGLRRQEDTRAILASYKGFDIASEFNKHQSKRKS 155
           LEE DT+L+DL+PFLE+V   R  D R +LASY+G DIA EF +   + +S
Sbjct: 41  LEEDDTQLLDLIPFLEYVARNRPADIRPVLASYQGHDIAKEFIERSKEYQS 91


>ref|XP_002264515.1| PREDICTED: mitochondrial import inner membrane translocase subunit
           TIM50 [Vitis vinifera] gi|296089900|emb|CBI39719.3|
           unnamed protein product [Vitis vinifera]
          Length = 371

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 26/42 (61%), Positives = 32/42 (76%)
 Frame = +3

Query: 3   LEEGDTELVDLLPFLEFVGLRRQEDTRAILASYKGFDIASEF 128
           LEE DT+L+DL+PFLE+V   R  D R +LASY+G DIA EF
Sbjct: 307 LEEDDTQLLDLIPFLEYVARNRPADIRPVLASYQGHDIAKEF 348


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