BLASTX nr result
ID: Coptis23_contig00014408
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00014408
(1198 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002310105.1| predicted protein [Populus trichocarpa] gi|2... 350 e-117
ref|XP_002266197.1| PREDICTED: post-GPI attachment to proteins f... 346 e-116
ref|XP_002266274.1| PREDICTED: post-GPI attachment to proteins f... 346 e-116
emb|CAN65586.1| hypothetical protein VITISV_034376 [Vitis vinifera] 346 e-116
ref|XP_002280194.1| PREDICTED: post-GPI attachment to proteins f... 343 e-116
>ref|XP_002310105.1| predicted protein [Populus trichocarpa] gi|222853008|gb|EEE90555.1|
predicted protein [Populus trichocarpa]
Length = 342
Score = 350 bits (897), Expect(2) = e-117
Identities = 158/203 (77%), Positives = 185/203 (91%)
Frame = +3
Query: 588 FHGWLSFFILLYHKLPLRPQTRRPYYEYAGLWLMYGFLAMNSWVWSAVFHSRDVELTEKL 767
FHGWLSFFILLY+KLPL+ Q ++ YYEYA LW +YGFL++NSW WSAVFHSRDV+LTEKL
Sbjct: 135 FHGWLSFFILLYYKLPLK-QDKKAYYEYASLWHIYGFLSLNSWFWSAVFHSRDVDLTEKL 193
Query: 768 DYSSAVALLGYSLILAILRTFNVRDEAARVMVAAPLIAFVTTHILYLNLFKLDYGLNMIV 947
DYSSAVA LGYSLI++ILR+FNVRDEAARVMVAAPL+AF+TTHIL++N +KLDYG NM V
Sbjct: 194 DYSSAVAFLGYSLIMSILRSFNVRDEAARVMVAAPLLAFLTTHILFINFYKLDYGWNMQV 253
Query: 948 CVAMGIAQLLLWVVWAGVTRHPSKWKLWAVVLATSLAMLLEIYDFPPYKGYVDAHALWHA 1127
CV M +AQLLLW +WAGVT HPS+WKLW VV+ LAMLLEIYDFPPY+GYVDAHALWHA
Sbjct: 254 CVVMAVAQLLLWAIWAGVTGHPSRWKLWVVVIGGGLAMLLEIYDFPPYEGYVDAHALWHA 313
Query: 1128 TTIPITYLWWSFIKDDAKFRTTD 1196
TTIP+TY+WWSFI+DDA+FRT++
Sbjct: 314 TTIPLTYIWWSFIRDDAEFRTSN 336
Score = 101 bits (251), Expect(2) = e-117
Identities = 50/90 (55%), Positives = 61/90 (67%), Gaps = 14/90 (15%)
Frame = +2
Query: 245 LLSCLVGVLIEASAGDSHPRYQVCVEQCKETGCV-----------KDKLAVDGPWYVQEP 391
+ SCL G L +ASAGDS P Y+ CV QC+++GCV D +++DGPWY QEP
Sbjct: 12 VFSCLGGTL-DASAGDSDPIYRTCVGQCEKSGCVGQRCFSHCNFSSDGVSIDGPWYKQEP 70
Query: 392 LYLQW---DCQSNCRYHCMLKTENEREVLG 472
LYLQW DCQS+CRY+CML E ERE LG
Sbjct: 71 LYLQWKQWDCQSDCRYYCMLDREKEREALG 100
>ref|XP_002266197.1| PREDICTED: post-GPI attachment to proteins factor 3 isoform 1 [Vitis
vinifera] gi|296082755|emb|CBI21760.3| unnamed protein
product [Vitis vinifera]
Length = 379
Score = 346 bits (888), Expect(2) = e-116
Identities = 159/204 (77%), Positives = 183/204 (89%)
Frame = +3
Query: 585 QFHGWLSFFILLYHKLPLRPQTRRPYYEYAGLWLMYGFLAMNSWVWSAVFHSRDVELTEK 764
QFHGWLSFFILL +KLPL+P ++ YYEY LW +YG L+MNSW WSAVFHSRDV+LTEK
Sbjct: 171 QFHGWLSFFILLNYKLPLKPN-KKAYYEYTCLWHIYGLLSMNSWFWSAVFHSRDVDLTEK 229
Query: 765 LDYSSAVALLGYSLILAILRTFNVRDEAARVMVAAPLIAFVTTHILYLNLFKLDYGLNMI 944
LDYSSAVALLG+SLILAILR+FNVR EAARVMV+APL+AFVTTHILYLN +K DYG NM
Sbjct: 230 LDYSSAVALLGFSLILAILRSFNVRVEAARVMVSAPLLAFVTTHILYLNFYKFDYGWNMK 289
Query: 945 VCVAMGIAQLLLWVVWAGVTRHPSKWKLWAVVLATSLAMLLEIYDFPPYKGYVDAHALWH 1124
VCV MG+AQLL+W +WAGVTRHPS+WKLW VV+ LAMLLEIYDFPPY+G+VDAHALWH
Sbjct: 290 VCVVMGVAQLLIWAIWAGVTRHPSRWKLWTVVVGGGLAMLLEIYDFPPYEGFVDAHALWH 349
Query: 1125 ATTIPITYLWWSFIKDDAKFRTTD 1196
ATTIP+TY+WWSFIKDDA+F+T +
Sbjct: 350 ATTIPLTYIWWSFIKDDAEFQTAN 373
Score = 99.0 bits (245), Expect(2) = e-116
Identities = 47/82 (57%), Positives = 55/82 (67%), Gaps = 14/82 (17%)
Frame = +2
Query: 269 LIEASAGDSHPRYQVCVEQCKETGCV-----------KDKLAVDGPWYVQEPLYL---QW 406
+ EAS GD+ P Y+ CVEQC++TGCV D VDGPWY+QEPLYL QW
Sbjct: 56 VFEASVGDADPLYRDCVEQCEKTGCVGERCFPHCKFPSDGAVVDGPWYLQEPLYLRWKQW 115
Query: 407 DCQSNCRYHCMLKTENEREVLG 472
DCQS+CRY+CML E ERE LG
Sbjct: 116 DCQSDCRYYCMLDREKEREALG 137
>ref|XP_002266274.1| PREDICTED: post-GPI attachment to proteins factor 3 isoform 2 [Vitis
vinifera]
Length = 342
Score = 346 bits (888), Expect(2) = e-116
Identities = 159/204 (77%), Positives = 183/204 (89%)
Frame = +3
Query: 585 QFHGWLSFFILLYHKLPLRPQTRRPYYEYAGLWLMYGFLAMNSWVWSAVFHSRDVELTEK 764
QFHGWLSFFILL +KLPL+P ++ YYEY LW +YG L+MNSW WSAVFHSRDV+LTEK
Sbjct: 134 QFHGWLSFFILLNYKLPLKPN-KKAYYEYTCLWHIYGLLSMNSWFWSAVFHSRDVDLTEK 192
Query: 765 LDYSSAVALLGYSLILAILRTFNVRDEAARVMVAAPLIAFVTTHILYLNLFKLDYGLNMI 944
LDYSSAVALLG+SLILAILR+FNVR EAARVMV+APL+AFVTTHILYLN +K DYG NM
Sbjct: 193 LDYSSAVALLGFSLILAILRSFNVRVEAARVMVSAPLLAFVTTHILYLNFYKFDYGWNMK 252
Query: 945 VCVAMGIAQLLLWVVWAGVTRHPSKWKLWAVVLATSLAMLLEIYDFPPYKGYVDAHALWH 1124
VCV MG+AQLL+W +WAGVTRHPS+WKLW VV+ LAMLLEIYDFPPY+G+VDAHALWH
Sbjct: 253 VCVVMGVAQLLIWAIWAGVTRHPSRWKLWTVVVGGGLAMLLEIYDFPPYEGFVDAHALWH 312
Query: 1125 ATTIPITYLWWSFIKDDAKFRTTD 1196
ATTIP+TY+WWSFIKDDA+F+T +
Sbjct: 313 ATTIPLTYIWWSFIKDDAEFQTAN 336
Score = 99.0 bits (245), Expect(2) = e-116
Identities = 47/82 (57%), Positives = 55/82 (67%), Gaps = 14/82 (17%)
Frame = +2
Query: 269 LIEASAGDSHPRYQVCVEQCKETGCV-----------KDKLAVDGPWYVQEPLYL---QW 406
+ EAS GD+ P Y+ CVEQC++TGCV D VDGPWY+QEPLYL QW
Sbjct: 19 VFEASVGDADPLYRDCVEQCEKTGCVGERCFPHCKFPSDGAVVDGPWYLQEPLYLRWKQW 78
Query: 407 DCQSNCRYHCMLKTENEREVLG 472
DCQS+CRY+CML E ERE LG
Sbjct: 79 DCQSDCRYYCMLDREKEREALG 100
>emb|CAN65586.1| hypothetical protein VITISV_034376 [Vitis vinifera]
Length = 342
Score = 346 bits (888), Expect(2) = e-116
Identities = 159/204 (77%), Positives = 183/204 (89%)
Frame = +3
Query: 585 QFHGWLSFFILLYHKLPLRPQTRRPYYEYAGLWLMYGFLAMNSWVWSAVFHSRDVELTEK 764
QFHGWLSFFILL +KLPL+P ++ YYEY LW +YG L+MNSW WSAVFHSRDV+LTEK
Sbjct: 134 QFHGWLSFFILLNYKLPLKPN-KKAYYEYTCLWHIYGLLSMNSWFWSAVFHSRDVDLTEK 192
Query: 765 LDYSSAVALLGYSLILAILRTFNVRDEAARVMVAAPLIAFVTTHILYLNLFKLDYGLNMI 944
LDYSSAVALLG+SLILAILR+FNVR EAARVMV+APL+AFVTTHILYLN +K DYG NM
Sbjct: 193 LDYSSAVALLGFSLILAILRSFNVRVEAARVMVSAPLLAFVTTHILYLNFYKFDYGWNMK 252
Query: 945 VCVAMGIAQLLLWVVWAGVTRHPSKWKLWAVVLATSLAMLLEIYDFPPYKGYVDAHALWH 1124
VCV MG+AQLL+W +WAGVTRHPS+WKLW VV+ LAMLLEIYDFPPY+G+VDAHALWH
Sbjct: 253 VCVVMGVAQLLIWTIWAGVTRHPSRWKLWTVVVGGGLAMLLEIYDFPPYEGFVDAHALWH 312
Query: 1125 ATTIPITYLWWSFIKDDAKFRTTD 1196
ATTIP+TY+WWSFIKDDA+F+T +
Sbjct: 313 ATTIPLTYIWWSFIKDDAEFQTAN 336
Score = 99.0 bits (245), Expect(2) = e-116
Identities = 47/82 (57%), Positives = 55/82 (67%), Gaps = 14/82 (17%)
Frame = +2
Query: 269 LIEASAGDSHPRYQVCVEQCKETGCV-----------KDKLAVDGPWYVQEPLYL---QW 406
+ EAS GD+ P Y+ CVEQC++TGCV D VDGPWY+QEPLYL QW
Sbjct: 19 VFEASVGDADPLYRDCVEQCEKTGCVGERCFPHCKFPSDGAVVDGPWYLQEPLYLRWKQW 78
Query: 407 DCQSNCRYHCMLKTENEREVLG 472
DCQS+CRY+CML E ERE LG
Sbjct: 79 DCQSDCRYYCMLDREKEREALG 100
>ref|XP_002280194.1| PREDICTED: post-GPI attachment to proteins factor 3 [Vitis vinifera]
gi|147785290|emb|CAN61923.1| hypothetical protein
VITISV_036651 [Vitis vinifera]
gi|297741118|emb|CBI31849.3| unnamed protein product
[Vitis vinifera]
Length = 342
Score = 343 bits (880), Expect(2) = e-116
Identities = 156/203 (76%), Positives = 180/203 (88%)
Frame = +3
Query: 585 QFHGWLSFFILLYHKLPLRPQTRRPYYEYAGLWLMYGFLAMNSWVWSAVFHSRDVELTEK 764
QFHGW+SF ILLY+KLPLRP ++ +YEY GLW +YG LAMN+W W+AVFHSRDV+LTEK
Sbjct: 134 QFHGWVSFLILLYYKLPLRPD-KKTFYEYTGLWHIYGILAMNAWFWNAVFHSRDVDLTEK 192
Query: 765 LDYSSAVALLGYSLILAILRTFNVRDEAARVMVAAPLIAFVTTHILYLNLFKLDYGLNMI 944
LDYSS VALLG++LILAILR FNVRDEAARVM+AAPL+AFVTTHILYLN +KLDYGLNM
Sbjct: 193 LDYSSGVALLGFTLILAILRAFNVRDEAARVMIAAPLMAFVTTHILYLNFYKLDYGLNMK 252
Query: 945 VCVAMGIAQLLLWVVWAGVTRHPSKWKLWAVVLATSLAMLLEIYDFPPYKGYVDAHALWH 1124
VC+ MGIAQLLLW VWAGVT HPS+WKLW VV+ +LAM LEIYDFPPY G+VDAHA+WH
Sbjct: 253 VCLTMGIAQLLLWTVWAGVTHHPSRWKLWVVVVGGALAMFLEIYDFPPYWGFVDAHAVWH 312
Query: 1125 ATTIPITYLWWSFIKDDAKFRTT 1193
A IP TYLWWSF+KDD++FRT+
Sbjct: 313 ALAIPFTYLWWSFVKDDSEFRTS 335
Score = 101 bits (252), Expect(2) = e-116
Identities = 52/89 (58%), Positives = 60/89 (67%), Gaps = 14/89 (15%)
Frame = +2
Query: 248 LSCLVGVLIEASAGDSHPRYQVCVEQCKETGCVKDKL-----------AVDGPWYVQEPL 394
LS LV VL ASAGDS P Y+ C+EQC++TGCV DK + GPWY+QEPL
Sbjct: 13 LSFLVRVL-NASAGDSDPLYKACIEQCEKTGCVGDKCFQHCKLSSDGNPIGGPWYLQEPL 71
Query: 395 YL---QWDCQSNCRYHCMLKTENEREVLG 472
YL QWDC+S+CRYHCML E ERE LG
Sbjct: 72 YLRWKQWDCRSDCRYHCMLAREEEREELG 100