BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014407
         (1864 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21621.3| unnamed protein product [Vitis vinifera]              737   0.0  
ref|XP_002273522.2| PREDICTED: NADH dehydrogenase C1, chloroplas...   737   0.0  
ref|XP_002309949.1| predicted protein [Populus trichocarpa] gi|2...   719   0.0  
ref|XP_002528013.1| NADH dehydrogenase, putative [Ricinus commun...   707   0.0  
ref|XP_003525138.1| PREDICTED: NADH dehydrogenase C1, chloroplas...   696   0.0  

>emb|CBI21621.3| unnamed protein product [Vitis vinifera]
          Length = 526

 Score =  737 bits (1903), Expect = 0.0
 Identities = 382/522 (73%), Positives = 436/522 (83%), Gaps = 3/522 (0%)
 Frame = +1

Query: 151  GKQFPIFLRKNATSNLPMLGKFSRRRTFCSVVSSSTAKSGG--DVVDGETP-RPLPLYAW 321
            G  FP   RK A  N+ +L  F + + F  V S +T  +GG  ++V+GE   RP   Y W
Sbjct: 26   GMLFPGSSRKLAI-NMSILMNF-QSKGFSFVASGATQWNGGVAELVEGEAASRP---YTW 80

Query: 322  SDKQRPRVCILGGGFGGLYTALRLESLVWEDDKKPQVLLVDQSDRFVFKPLLYELLSGEV 501
             DK++PRVCILGGGFGGLYTALRLESLVW +DKKPQVLLVDQS+RFVFKP+LYELL+GEV
Sbjct: 81   PDKKKPRVCILGGGFGGLYTALRLESLVWPEDKKPQVLLVDQSERFVFKPMLYELLTGEV 140

Query: 502  DAWEIAPRFLDLLANTAVQFVQDRVKILQPSDHLGKNGSTRLSCGGRVQLESGLCIEYDW 681
            DAWEIAPRF DLLANT VQF QDRVK+L PSDHLG NG T  SCGG V LESGL IEYDW
Sbjct: 141  DAWEIAPRFSDLLANTGVQFFQDRVKVLHPSDHLGMNGPTVSSCGGTVHLESGLVIEYDW 200

Query: 682  LVLALGAEPKLDLVPGAAEFALPFSSLEDAFKVNTKLRTLEREKFGKDLSPIRVAVVGCG 861
            LVLALGAE KLD+VPGAAEFALPFS+LEDA +V+ +LRTLER++FG+D  PIRVAVVGCG
Sbjct: 201  LVLALGAEAKLDVVPGAAEFALPFSTLEDACRVDNRLRTLERKRFGRDF-PIRVAVVGCG 259

Query: 862  YSGVELAATVSERLQSRGRVQAINVSTTILPGAPPGNREAAAKVLSSRNVQLFLGYFVSC 1041
            YSGVELAATVSERLQ +G VQAINV TTI P APPGNREAA KVLSSRNV+L LG+FV C
Sbjct: 260  YSGVELAATVSERLQDKGIVQAINVETTICPTAPPGNREAALKVLSSRNVELLLGFFVRC 319

Query: 1042 IRKSGKYEDSKLSVFERNNDISEQAHTELVLELQPAERGLKSQILESDLVLWTVGSKPLV 1221
            IRK+                ISE    +L+LELQPAERGL+SQILE+DL+LWTVGSKP +
Sbjct: 320  IRKAS---------------ISEHEPEKLILELQPAERGLQSQILEADLILWTVGSKPQL 364

Query: 1222 PKVESGDRPHMLPVNGRGQAETDETLRVKGHPRVFAIGDSAALRDSAGRILPATAQVAFQ 1401
            P++E  + PH LP+N RGQAETDETLRVKGHPR+FA+GDS++LRDS G++LPATAQVAFQ
Sbjct: 365  PQLEPCEWPHELPLNARGQAETDETLRVKGHPRIFAVGDSSSLRDSKGKLLPATAQVAFQ 424

Query: 1402 QADFAGWNLWAAINDRPLLPFRFQNLGEMMTLGRNDGAITPSFIEGLTLDGPIGHTARKI 1581
            QADFAGWNLWAAINDRPLLPFRFQNLGEMMTLGRND AI+PSFIEGLTL+GPIGH ARK+
Sbjct: 425  QADFAGWNLWAAINDRPLLPFRFQNLGEMMTLGRNDAAISPSFIEGLTLEGPIGHAARKL 484

Query: 1582 AYLIRLPTDEHKVKVGLSWLTKSAVDSIASFQSNVTKVLSGS 1707
            AYLIRLPTDEH++KVG+SWLTKSA+DS+A+ QS+V KVLSGS
Sbjct: 485  AYLIRLPTDEHRLKVGISWLTKSAIDSVAAVQSSVIKVLSGS 526


>ref|XP_002273522.2| PREDICTED: NADH dehydrogenase C1, chloroplastic/mitochondrial-like
            [Vitis vinifera]
          Length = 543

 Score =  737 bits (1902), Expect = 0.0
 Identities = 382/524 (72%), Positives = 439/524 (83%), Gaps = 5/524 (0%)
 Frame = +1

Query: 151  GKQFPIFLRKNATSNLPMLGKFSRRRTFCSVVSSSTAKSGG--DVVDGETP-RPLPLYAW 321
            G  FP   RK A  N+ +L  F + + F  V S +T  +GG  ++V+GE   RP   Y W
Sbjct: 26   GMLFPGSSRKLAI-NMSILMNF-QSKGFSFVASGATQWNGGVAELVEGEAASRP---YTW 80

Query: 322  SDKQRPRVCILGGGFGGLYTALRLESLVWEDDKKPQVLLVDQSDRFVFKPLLYELLSGEV 501
             DK++PRVCILGGGFGGLYTALRLESLVW +DKKPQVLLVDQS+RFVFKP+LYELL+GEV
Sbjct: 81   PDKKKPRVCILGGGFGGLYTALRLESLVWPEDKKPQVLLVDQSERFVFKPMLYELLTGEV 140

Query: 502  DAWEIAPRFLDLLANTAVQFVQDRVKILQPSDHLGKNGSTRLSCGGRVQLESGLCIEYDW 681
            DAWEIAPRF DLLANT VQF QDRVK+L PSDHLG NG T  SCGG V LESGL IEYDW
Sbjct: 141  DAWEIAPRFSDLLANTGVQFFQDRVKVLHPSDHLGMNGPTVSSCGGTVHLESGLVIEYDW 200

Query: 682  LVLALGAEPKLDLVPGAAEFALPFSSLEDAFKVNTKLRTLEREKFGKDLSPIRVAVVGCG 861
            LVLALGAE KLD+VPGAAEFALPFS+LEDA +V+ +LRTLER++FG+D  PIRVAVVGCG
Sbjct: 201  LVLALGAEAKLDVVPGAAEFALPFSTLEDACRVDNRLRTLERKRFGRDF-PIRVAVVGCG 259

Query: 862  YSGVELAATVSERLQSRGRVQAINVSTTILPGAPPGNREAAAKVLSSRNVQLFLGYFVSC 1041
            YSGVELAATVSERLQ +G VQAINV TTI P APPGNREAA KVLSSRNV+L LG+FV C
Sbjct: 260  YSGVELAATVSERLQDKGIVQAINVETTICPTAPPGNREAALKVLSSRNVELLLGFFVRC 319

Query: 1042 IRKSGKYEDSKLSVFERN--NDISEQAHTELVLELQPAERGLKSQILESDLVLWTVGSKP 1215
            IRK+   E S+         +  +E    +L+LELQPAERGL+SQILE+DL+LWTVGSKP
Sbjct: 320  IRKASISEVSEKQTESGTLLDAAAEHEPEKLILELQPAERGLQSQILEADLILWTVGSKP 379

Query: 1216 LVPKVESGDRPHMLPVNGRGQAETDETLRVKGHPRVFAIGDSAALRDSAGRILPATAQVA 1395
             +P++E  + PH LP+N RGQAETDETLRVKGHPR+FA+GDS++LRDS G++LPATAQVA
Sbjct: 380  QLPQLEPCEWPHELPLNARGQAETDETLRVKGHPRIFAVGDSSSLRDSKGKLLPATAQVA 439

Query: 1396 FQQADFAGWNLWAAINDRPLLPFRFQNLGEMMTLGRNDGAITPSFIEGLTLDGPIGHTAR 1575
            FQQADFAGWNLWAAINDRPLLPFRFQNLGEMMTLGRND AI+PSFIEGLTL+GPIGH AR
Sbjct: 440  FQQADFAGWNLWAAINDRPLLPFRFQNLGEMMTLGRNDAAISPSFIEGLTLEGPIGHAAR 499

Query: 1576 KIAYLIRLPTDEHKVKVGLSWLTKSAVDSIASFQSNVTKVLSGS 1707
            K+AYLIRLPTDEH++KVG+SWLTKSA+DS+A+ QS+V KVLSGS
Sbjct: 500  KLAYLIRLPTDEHRLKVGISWLTKSAIDSVAAVQSSVIKVLSGS 543


>ref|XP_002309949.1| predicted protein [Populus trichocarpa] gi|222852852|gb|EEE90399.1|
            predicted protein [Populus trichocarpa]
          Length = 553

 Score =  719 bits (1855), Expect = 0.0
 Identities = 364/487 (74%), Positives = 411/487 (84%)
 Frame = +1

Query: 247  SSSTAKSGGDVVDGETPRPLPLYAWSDKQRPRVCILGGGFGGLYTALRLESLVWEDDKKP 426
            ++S +    D+   ETP+ +  Y W D ++P+VCILGGGFGGLYTALRLESL+W DDKKP
Sbjct: 84   AASPSPVNEDISQKETPQRI--YTWPDNKKPKVCILGGGFGGLYTALRLESLIWADDKKP 141

Query: 427  QVLLVDQSDRFVFKPLLYELLSGEVDAWEIAPRFLDLLANTAVQFVQDRVKILQPSDHLG 606
            QVLLVDQS+RFVFKPLLYELLSGEVDAWEIAPRF +LLANT +QF++DRVK+L P+DHLG
Sbjct: 142  QVLLVDQSERFVFKPLLYELLSGEVDAWEIAPRFSELLANTGIQFLRDRVKMLHPADHLG 201

Query: 607  KNGSTRLSCGGRVQLESGLCIEYDWLVLALGAEPKLDLVPGAAEFALPFSSLEDAFKVNT 786
             NGST    GG V LESGL IEYDWLVL+LGA  KLD VPGAAEFA PFS+LEDA KV+ 
Sbjct: 202  MNGSTGSCSGGTVVLESGLLIEYDWLVLSLGAGAKLDTVPGAAEFAFPFSTLEDACKVDN 261

Query: 787  KLRTLEREKFGKDLSPIRVAVVGCGYSGVELAATVSERLQSRGRVQAINVSTTILPGAPP 966
            KL+ LER KFGKD S IRVAVVGCGYSGVELAATVSERLQ RG VQAINV+TTILP APP
Sbjct: 262  KLKELERRKFGKD-SLIRVAVVGCGYSGVELAATVSERLQDRGLVQAINVNTTILPTAPP 320

Query: 967  GNREAAAKVLSSRNVQLFLGYFVSCIRKSGKYEDSKLSVFERNNDISEQAHTELVLELQP 1146
            GNREAA KVLSSR VQL LGYFV CIRK               +D+ E    + +LELQP
Sbjct: 321  GNREAALKVLSSRKVQLLLGYFVRCIRKE--------------SDLEEHGSEKYILELQP 366

Query: 1147 AERGLKSQILESDLVLWTVGSKPLVPKVESGDRPHMLPVNGRGQAETDETLRVKGHPRVF 1326
            AERGL+SQILE+DLVLWTVGS+P +P++E  D+ H LP+NGRGQAETDETLRVKGHPR+F
Sbjct: 367  AERGLQSQILEADLVLWTVGSQPPLPQLEPYDKTHELPLNGRGQAETDETLRVKGHPRIF 426

Query: 1327 AIGDSAALRDSAGRILPATAQVAFQQADFAGWNLWAAINDRPLLPFRFQNLGEMMTLGRN 1506
            A+GDS+ALRD  GRILPATAQVAFQQADF GWNLWAAINDRPLLPFRFQNLGEMMTLGRN
Sbjct: 427  ALGDSSALRDMNGRILPATAQVAFQQADFTGWNLWAAINDRPLLPFRFQNLGEMMTLGRN 486

Query: 1507 DGAITPSFIEGLTLDGPIGHTARKIAYLIRLPTDEHKVKVGLSWLTKSAVDSIASFQSNV 1686
            D A++PSFIEGLTL+GP+GH ARKIAYLIRLPTDEH++KVG+SWLTKSAVDS+AS QS +
Sbjct: 487  DAALSPSFIEGLTLEGPVGHAARKIAYLIRLPTDEHRLKVGISWLTKSAVDSVASIQSTL 546

Query: 1687 TKVLSGS 1707
            +KVLSGS
Sbjct: 547  SKVLSGS 553


>ref|XP_002528013.1| NADH dehydrogenase, putative [Ricinus communis]
            gi|223532582|gb|EEF34369.1| NADH dehydrogenase, putative
            [Ricinus communis]
          Length = 536

 Score =  707 bits (1824), Expect = 0.0
 Identities = 361/492 (73%), Positives = 411/492 (83%), Gaps = 2/492 (0%)
 Frame = +1

Query: 235  CSVVSSSTAKSGGDVVDGETPRPLPLYAWSDKQRPRVCILGGGFGGLYTALRLESLVWED 414
            CS +  +   +  ++   ET RP  +Y W D ++PRVCILGGGFGGLYTALRLESLVW D
Sbjct: 49   CSAIGGNQGVA--EISQSET-RPR-IYTWPDNKKPRVCILGGGFGGLYTALRLESLVWAD 104

Query: 415  DKKPQVLLVDQSDRFVFKPLLYELLSGEVDAWEIAPRFLDLLANTAVQFVQDRVKILQPS 594
            DKKPQVLLVDQS  FVFKP+LYELLSGEVDAWEIAPRF DLLANT V F+QD+VK+LQPS
Sbjct: 105  DKKPQVLLVDQSAHFVFKPMLYELLSGEVDAWEIAPRFSDLLANTGVLFLQDKVKLLQPS 164

Query: 595  DHLGKNGSTRLSCGGRVQLESGLCIEYDWLVLALGAEPKLDLVPGAAEFALPFSSLEDAF 774
            DHLGKNGS+  SCGG V L SGL IEYDWLVLALGAE +LD+VPGAA+ A PFS+LEDA 
Sbjct: 165  DHLGKNGSSGSSCGGTVLLASGLLIEYDWLVLALGAEARLDVVPGAAKCAFPFSTLEDAC 224

Query: 775  KVNTKLRTLEREKFGKDLSPIRVAVVGCGYSGVELAATVSERLQSRGRVQAINVSTTILP 954
            +VN KL  LER  FGKD S IRVAVVGCGYSGVELAAT+SERL+ RG +QAIN+ T I P
Sbjct: 225  RVNHKLNALERRNFGKD-SLIRVAVVGCGYSGVELAATISERLKERGVIQAINIDTNICP 283

Query: 955  GAPPGNREAAAKVLSSRNVQLFLGYFVSCIRKSGKYEDSKLS--VFERNNDISEQAHTEL 1128
             APPGNREAA +VLSSR VQL LGYFV CI+ +   E S +S  V    N  SE +  + 
Sbjct: 284  AAPPGNREAALRVLSSRKVQLLLGYFVRCIQIANDLETSAMSAEVDASENIASEHSSEKY 343

Query: 1129 VLELQPAERGLKSQILESDLVLWTVGSKPLVPKVESGDRPHMLPVNGRGQAETDETLRVK 1308
             LELQPAERGL+SQILE+DLVLWTVGSKPL+ ++ES  +   LP+N RGQAETDETLRVK
Sbjct: 344  FLELQPAERGLQSQILEADLVLWTVGSKPLLSQLESDYQSRELPLNARGQAETDETLRVK 403

Query: 1309 GHPRVFAIGDSAALRDSAGRILPATAQVAFQQADFAGWNLWAAINDRPLLPFRFQNLGEM 1488
            GHPR+FA+GDS+ALRDS+GR+LPATAQVAFQQADFAGWNLWAAINDRPLLPFRFQNLGEM
Sbjct: 404  GHPRIFALGDSSALRDSSGRLLPATAQVAFQQADFAGWNLWAAINDRPLLPFRFQNLGEM 463

Query: 1489 MTLGRNDGAITPSFIEGLTLDGPIGHTARKIAYLIRLPTDEHKVKVGLSWLTKSAVDSIA 1668
            MTLGRND A++PSFIEGLTL+GPIGH ARK+AYLIRLPTDEH++KVG+SWLTKSA+DS+A
Sbjct: 464  MTLGRNDAALSPSFIEGLTLEGPIGHAARKLAYLIRLPTDEHRLKVGISWLTKSAIDSVA 523

Query: 1669 SFQSNVTKVLSG 1704
            S QS + KVLSG
Sbjct: 524  SMQSTLAKVLSG 535


>ref|XP_003525138.1| PREDICTED: NADH dehydrogenase C1, chloroplastic/mitochondrial-like
            [Glycine max]
          Length = 544

 Score =  696 bits (1796), Expect = 0.0
 Identities = 357/550 (64%), Positives = 421/550 (76%), Gaps = 2/550 (0%)
 Frame = +1

Query: 64   LSPKIIFYHLNSREMGSLAGWATVTPFRCGKQFPIFLRKNATSNLPMLGKFSRRRTFCSV 243
            +SP ++ +H  +++  +L               P F R     +        +R      
Sbjct: 10   VSPTVVAFHRGAKQWSAL--------------IPNFRRSRGIGSSVFSSSLRKRLQLRFF 55

Query: 244  VSSSTAKSGGDVVD-GETPRPLPLYAWSDKQRPRVCILGGGFGGLYTALRLESLVWEDDK 420
             S     +GG + +  E  +    +AW D ++PRVCILGGGFGGLYTALRLESL W DDK
Sbjct: 56   ASGENGGNGGVLEEISEAEKEPTNFAWPDNKKPRVCILGGGFGGLYTALRLESLEWPDDK 115

Query: 421  KPQVLLVDQSDRFVFKPLLYELLSGEVDAWEIAPRFLDLLANTAVQFVQDRVKILQPSDH 600
            KPQ++LVDQS+RFVFKP+LYELLSGEVD WEIAPRF DLLANT+VQF +DRVK+L PSDH
Sbjct: 116  KPQIVLVDQSERFVFKPMLYELLSGEVDEWEIAPRFSDLLANTSVQFFKDRVKVLNPSDH 175

Query: 601  LGKNGSTRLSCGGRVQLESGLCIEYDWLVLALGAEPKLDLVPGAAEFALPFSSLEDAFKV 780
             G NGS   SCGG V LESGL IEYDWLVLALGAE KLD+VPGA EFA+PFS+LEDA KV
Sbjct: 176  WGMNGSKASSCGGTVHLESGLLIEYDWLVLALGAEAKLDVVPGAIEFAIPFSTLEDARKV 235

Query: 781  NTKLRTLEREKFGKDLSPIRVAVVGCGYSGVELAATVSERLQSRGRVQAINVSTTILPGA 960
            N KL  LER+ FG D   I VAVVGCGYSGVELAAT++ERLQ+RG V+AINV T I P A
Sbjct: 236  NDKLTKLERKTFGTDFQ-ISVAVVGCGYSGVELAATLAERLQNRGIVRAINVETMICPNA 294

Query: 961  PPGNREAAAKVLSSRNVQLFLGYFVSCIRKSGKYEDSK-LSVFERNNDISEQAHTELVLE 1137
            PPGNRE A KVLSSR V+L LGYFV CIR+    E S  L+  + N+        + +LE
Sbjct: 295  PPGNREVALKVLSSRKVELLLGYFVRCIRRLSDLESSDPLTGVDENSTEVVPDFEKYILE 354

Query: 1138 LQPAERGLKSQILESDLVLWTVGSKPLVPKVESGDRPHMLPVNGRGQAETDETLRVKGHP 1317
            LQPAERG++S+I+E+DLVLWTVG+KP +P++E  D P ++P+N RGQAETDETLRVKGHP
Sbjct: 355  LQPAERGMQSKIIEADLVLWTVGTKPPLPQLEPSDEPFVIPLNARGQAETDETLRVKGHP 414

Query: 1318 RVFAIGDSAALRDSAGRILPATAQVAFQQADFAGWNLWAAINDRPLLPFRFQNLGEMMTL 1497
            R+FA+GDS+ALRDS GRILPATAQVAFQQADF GWNLWAAIN RPLLPFRFQNLGEMMTL
Sbjct: 415  RIFALGDSSALRDSNGRILPATAQVAFQQADFTGWNLWAAINGRPLLPFRFQNLGEMMTL 474

Query: 1498 GRNDGAITPSFIEGLTLDGPIGHTARKIAYLIRLPTDEHKVKVGLSWLTKSAVDSIASFQ 1677
            GRND AI+PSFI+GLTL+G IGHTARKIAYLIRLPTDEH++KVG+SWLTKSA+DS++S Q
Sbjct: 475  GRNDAAISPSFIDGLTLEGSIGHTARKIAYLIRLPTDEHRLKVGISWLTKSAIDSVSSLQ 534

Query: 1678 SNVTKVLSGS 1707
            S + KVLSGS
Sbjct: 535  STLYKVLSGS 544