BLASTX nr result
ID: Coptis23_contig00014398
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00014398
(1261 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002267361.2| PREDICTED: uncharacterized protein LOC100260... 397 e-108
emb|CBI36835.3| unnamed protein product [Vitis vinifera] 392 e-106
ref|XP_004136037.1| PREDICTED: uncharacterized protein LOC101211... 378 e-102
ref|XP_002321014.1| predicted protein [Populus trichocarpa] gi|2... 377 e-102
ref|XP_003591556.1| Katanin p60 ATPase-containing subunit A-like... 354 3e-95
>ref|XP_002267361.2| PREDICTED: uncharacterized protein LOC100260666 [Vitis vinifera]
Length = 1258
Score = 397 bits (1020), Expect = e-108
Identities = 234/443 (52%), Positives = 303/443 (68%), Gaps = 28/443 (6%)
Frame = -2
Query: 1248 SSSEREAVAISKVDLAANGTSHLDGIGLDACFDAGIGRIPGINYEFKPYMPMFP-RSPSD 1072
SS E+ V S+ AAN +L IGLDAC D IG++PG YE +P + M S SD
Sbjct: 345 SSREKTDVPSSE---AANENLNLQSIGLDACTDTEIGKVPGATYELRPLLRMLAGSSSSD 401
Query: 1071 FELDGSMFRTVDEQRENSDLDK------SIPSSRCEAFQDHLKEKILFASDIEVSFDDFP 910
F+L GS+ + ++EQRE ++ K ++ S+R +AF+D L+E IL + DIEVSF+ FP
Sbjct: 402 FDLSGSISKILEEQREIREILKDLEPPMALTSTRRQAFKDSLQEGILSSDDIEVSFESFP 461
Query: 909 YYLSDSTKNVLIASTYVHFKCPKFATNALDLPTVSPRILLCGPSGSEIYQETLTKALAKY 730
YYLSD+TKNVLI STY+H KFA +DL +V PRILL GP+GSEIYQETLTKALAK+
Sbjct: 462 YYLSDTTKNVLITSTYIHLMHIKFAKYTMDLSSVCPRILLSGPAGSEIYQETLTKALAKH 521
Query: 729 FGARLLIVDSLLLPGEFLTKDSVSSKEDLNLEKSGSFSK---QRFASQQKKQASSVEADI 559
F ARLLIVDSLLLPG KD KE+ E++ F+K Q Q KK ASSVEADI
Sbjct: 522 FTARLLIVDSLLLPGGSTPKDPDPVKENTRGERASIFAKRAAQAAVLQHKKPASSVEADI 581
Query: 558 VGSSTLNPQGLPKQETSTASSNNHTPKTGDRVKYMGNIHPCGFPPLQPISRAGLPHGHKA 379
G+ST++ + LPKQETSTA+S N+ K G VK++G P GF P+ P+ G +G++
Sbjct: 582 TGASTVSSRALPKQETSTATSKNYIFKAG-IVKFVGP-PPSGFSPMPPL--RGPTNGYRG 637
Query: 378 KVILALKKHGSSKFGVRFDKALPEDG-----------------LLGLENPVVDDVDNLAI 250
KV+LA +++GSSK GVRFD+++PE LL L++ DDVD LA+
Sbjct: 638 KVLLAFEENGSSKIGVRFDRSIPEGNDLGGLCEDDHGFFCPADLLRLDSSSSDDVDKLAL 697
Query: 249 DELFEVAYSESKTGPLILFVKEIEKSMLGSKEAYTSLKAKLENLPEDVVVIISSTQID-R 73
+ELFEVA +ESK+ PLILF+K+IEKS++G+ EAY L+NLPE++V+I S TQ+D R
Sbjct: 698 NELFEVASNESKSSPLILFIKDIEKSIVGNPEAYXXXXXXLDNLPENIVIIGSHTQMDSR 757
Query: 72 KDKSHLGGLLFTKFGSNPTALLD 4
K+KSH GGLLFTKFGSN TALLD
Sbjct: 758 KEKSHPGGLLFTKFGSNQTALLD 780
>emb|CBI36835.3| unnamed protein product [Vitis vinifera]
Length = 1287
Score = 392 bits (1007), Expect = e-106
Identities = 236/471 (50%), Positives = 305/471 (64%), Gaps = 56/471 (11%)
Frame = -2
Query: 1248 SSSEREAVAISKVDLAANGTSHLDGIGLDACFDAGIGRIPGINYEFKPYMPMFP-RSPSD 1072
SS E+ V S+ AAN +L IGLDAC D IG++PG YE +P + M S SD
Sbjct: 345 SSREKTDVPSSE---AANENLNLQSIGLDACTDTEIGKVPGATYELRPLLRMLAGSSSSD 401
Query: 1071 FELDGSMFRTVDEQRENSDLDK------SIPSSRCEAFQDHLKEKILFASDIEVSFDDFP 910
F+L GS+ + ++EQRE ++ K ++ S+R +AF+D L+E IL + DIEVSF+ FP
Sbjct: 402 FDLSGSISKILEEQREIREILKDLEPPMALTSTRRQAFKDSLQEGILSSDDIEVSFESFP 461
Query: 909 YYLSDSTKNVLIASTYVHFKCPKFATNALDLPTVSPRILLCGPSGSEIYQETLTKALAKY 730
YYLSD+TKNVLI STY+H KFA +DL +V PRILL GP+GSEIYQETLTKALAK+
Sbjct: 462 YYLSDTTKNVLITSTYIHLMHIKFAKYTMDLSSVCPRILLSGPAGSEIYQETLTKALAKH 521
Query: 729 FGARLLIVDSLLLPGEFLTKDSVSSKEDLNLEKSGSFSK---QRFASQQKKQASSVEADI 559
F ARLLIVDSLLLPG KD KE+ E++ F+K Q Q KK ASSVEADI
Sbjct: 522 FTARLLIVDSLLLPGGSTPKDPDPVKENTRGERASIFAKRAAQAAVLQHKKPASSVEADI 581
Query: 558 VGSSTLNPQGLPKQETSTASSNNHTPKTGDRVKYMGNIHPCGFPPLQPISRAGLPHGHKA 379
G+ST++ + LPKQETSTA+S N+ K GDRVK++G P GF P+ P+ G +G++
Sbjct: 582 TGASTVSSRALPKQETSTATSKNYIFKAGDRVKFVGP-PPSGFSPMPPL--RGPTNGYRG 638
Query: 378 KVILALKKHGSSKFGVRFDKALPEDG-----------------LLGLENPVVDDVDNLAI 250
KV+LA +++GSSK GVRFD+++PE LL L++ DDVD LA+
Sbjct: 639 KVLLAFEENGSSKIGVRFDRSIPEGNDLGGLCEDDHGFFCPADLLRLDSSSSDDVDKLAL 698
Query: 249 DELFEVAYSESKTGPLILFVKEIEKSMLGSKEAY-------------------------- 148
+ELFEVA +ESK+ PLILF+K+IEKS++G+ EAY
Sbjct: 699 NELFEVASNESKSSPLILFIKDIEKSIVGNPEAYXXXXXXXXXXXXXXXXXXXXXXXXXX 758
Query: 147 --TSLKAKLENLPEDVVVIISSTQID-RKDKSHLGGLLFTKFGSNPTALLD 4
L+NLPE++V+I S TQ+D RK+KSH GGLLFTKFGSN TALLD
Sbjct: 759 XXXXXXXXLDNLPENIVIIGSHTQMDSRKEKSHPGGLLFTKFGSNQTALLD 809
>ref|XP_004136037.1| PREDICTED: uncharacterized protein LOC101211144 [Cucumis sativus]
Length = 1270
Score = 378 bits (971), Expect = e-102
Identities = 219/427 (51%), Positives = 284/427 (66%), Gaps = 34/427 (7%)
Frame = -2
Query: 1182 LDGIGLDACFDAGIGRIPGINYEFKPYMPMFPRSPS-DFELDG-SMFRTVDEQRENSDLD 1009
LD + LDA D +G P + E +P + + S S DF ++G S+ + ++EQR+ +L
Sbjct: 366 LDRLALDASIDGEVGEAPAKHSELRPLLQILASSASPDFNINGGSISKILNEQRDMGNLF 425
Query: 1008 KS------IPSSRCEAFQDHLKEKILFASDIEVSFDDFPYYLSDSTKNVLIASTYVHFKC 847
K + S+R +AF++ L++ IL +I+VS + FPYYLSD+TKNVLIAS +VH KC
Sbjct: 426 KDFSPPAVLMSTRRQAFKERLQQGILKPDNIDVSLESFPYYLSDTTKNVLIASMFVHLKC 485
Query: 846 PKFATNALDLPTVSPRILLCGPSGSEIYQETLTKALAKYFGARLLIVDSLLLPGEFLTKD 667
KF +A DLP +SPRILL GP+GSEIYQETLTKALA++FGARLLIVDSLLLPG KD
Sbjct: 486 NKFVKHASDLPILSPRILLSGPAGSEIYQETLTKALARHFGARLLIVDSLLLPGGPTPKD 545
Query: 666 SVSSKEDLNLEKSGSFSKQRF-------ASQQKKQASSVEADIVGSSTLNPQGLPKQETS 508
K++ +++ F+K+ SQ KK SSVEADI G STL+ Q LPKQE S
Sbjct: 546 VDIVKDNSRPDRTSFFAKRAVQAAAAAAVSQNKKPTSSVEADIAGGSTLSSQALPKQEAS 605
Query: 507 TASSNNHTPKTGDRVKYMGNIHPCGFPPLQPISRAGLPHGHKAKVILALKKHGSSKFGVR 328
TASS KTGD+VK++G + PPLQ G +G + KV+LA +++GSSK GVR
Sbjct: 606 TASSKTTAFKTGDKVKFVGTLSSTLSPPLQTCPLRGPSYGCRGKVVLAFEENGSSKIGVR 665
Query: 327 FDKALPE------------------DGLLGLENPVVDDVDNLAIDELFEVAYSESKTGPL 202
FDK++P+ + LL L+ P DD D LAIDE+FEV +ESK PL
Sbjct: 666 FDKSIPDGNDLGGLCEEDHGFFCSANHLLRLDGPGGDDTDKLAIDEVFEVVSNESKNSPL 725
Query: 201 ILFVKEIEKSMLGSKEAYTSLKAKLENLPEDVVVIISSTQID-RKDKSHLGGLLFTKFGS 25
ILFVK+IEK+M+G +AY+ LK +LENLP +VVVI S T +D RK+KSH GGLLFTKFGS
Sbjct: 726 ILFVKDIEKAMVGHSDAYSILKGRLENLPGNVVVIGSHTHMDNRKEKSHPGGLLFTKFGS 785
Query: 24 NPTALLD 4
N TALLD
Sbjct: 786 NQTALLD 792
>ref|XP_002321014.1| predicted protein [Populus trichocarpa] gi|222861787|gb|EEE99329.1|
predicted protein [Populus trichocarpa]
Length = 1231
Score = 377 bits (967), Expect = e-102
Identities = 226/429 (52%), Positives = 289/429 (67%), Gaps = 18/429 (4%)
Frame = -2
Query: 1236 REAVAISKVDLAANGTSHLDGIGLDACFDAGIGRIPGINYEFKPYMPMFPRSPSDFELDG 1057
RE A+ + AA+ +++D +G AC DA IGRIP YE KP + M S S+ +
Sbjct: 330 REKAAVPSSN-AASENANVDSMGSGACTDAVIGRIPNSTYELKPLLRMLAGSSSELD--- 385
Query: 1056 SMFRTVDEQRENSDLDKS--IPSSRCEAFQDHLKEKILFASDIEVSFDDFPYYLSDSTKN 883
+F + + DLD + S+R + F+D L++ IL +IEVSFD FPYYLSD+TK
Sbjct: 386 KIFDERERREILKDLDPPPVLMSTRRQLFKDSLQKGILNPEEIEVSFDSFPYYLSDTTKK 445
Query: 882 VLIASTYVHFKCP-KFATNALDLPTVSPRILLCGPSGSEIYQETLTKALAKYFGARLLIV 706
VLI++ ++H KC K A A DLPTVSPR+LL GP+GSEIYQETLTKALAK GARLLIV
Sbjct: 446 VLISAAFIHLKCGNKVAKFACDLPTVSPRMLLSGPAGSEIYQETLTKALAKDVGARLLIV 505
Query: 705 DSLLLPGEFLTKDSVSSKEDLNLEKSGSFSKQ--RFASQQKKQASSVEADIVGSSTLNPQ 532
DSL LPG + K++ SS+E E+ F+K+ + A Q KK SSVEADI G ST +
Sbjct: 506 DSLQLPGGSIPKEADSSRESSKSERVSVFAKRAVQAALQSKKPTSSVEADITGCSTFSSH 565
Query: 531 GLPKQETSTASSNNHTPKTGDRVKYMGNIHPCGFPPLQPISRAGLPHGHKAKVILALKKH 352
PKQETSTASS N+T KTGDRVK++G LQP + G G + KV+LA + +
Sbjct: 566 ARPKQETSTASSKNYTFKTGDRVKFVGASLASAISSLQPPLK-GPTIGLRGKVVLAFEGN 624
Query: 351 GSSKFGVRFDKALPEDGLLG------------LENPVVDDVDNLAIDELFEVAYSESKTG 208
SSK GVRFD+++PE LG L+ +DVD LAI+ELFEVA +ESK G
Sbjct: 625 DSSKIGVRFDRSIPEGNDLGGRCEEDHANSLRLDISGGEDVDRLAINELFEVALNESKNG 684
Query: 207 PLILFVKEIEKSMLGSKEAYTSLKAKLENLPEDVVVIISSTQID-RKDKSHLGGLLFTKF 31
PLILFVK++EKS++G+++AY+SLK+KLE+LPE VVV+ TQID RK+KSH GGLLFTKF
Sbjct: 685 PLILFVKDLEKSVVGNQDAYSSLKSKLESLPEKVVVVGCHTQIDNRKEKSHAGGLLFTKF 744
Query: 30 GSNPTALLD 4
G N TALLD
Sbjct: 745 GGNHTALLD 753
>ref|XP_003591556.1| Katanin p60 ATPase-containing subunit A-like protein [Medicago
truncatula] gi|355480604|gb|AES61807.1| Katanin p60
ATPase-containing subunit A-like protein [Medicago
truncatula]
Length = 1242
Score = 354 bits (908), Expect = 3e-95
Identities = 211/452 (46%), Positives = 290/452 (64%), Gaps = 35/452 (7%)
Frame = -2
Query: 1254 TRSSSEREAVAISKVDLAANGTS-----HLDGIGLDACFDAGIGRIPGINYEFKPYMPMF 1090
T ++ E V S D+ ++ T+ LD + +DA D +G++ NYE +P + M
Sbjct: 322 TTNNDESAGVFSSGKDIPSSSTTANENPSLDTMDVDANADTDVGKMANANYELRPLLCML 381
Query: 1089 PRSPSDFELDGSMFRTVDEQRENSDLDKS--IPSSRCEAFQDHLKEKILFASDIEVSFDD 916
S ++F+L GS+ + +++QRE +LD + S+R +AF+D L+++IL A DI+VSF+
Sbjct: 382 TGSGTEFDLSGSIHKILEDQRELRELDTPTILASTRRQAFRDSLEQRILKADDIDVSFET 441
Query: 915 FPYYLSDSTKNVLIASTYVHFKCPKFATNALDLPTVSPRILLCGPSGSEIYQETLTKALA 736
FPYYLSD+TKNVL+ASTY+H KC A D ++ PRILL GPSGSEIYQETL+KALA
Sbjct: 442 FPYYLSDTTKNVLVASTYIHLKCNGIGKYASDFSSLCPRILLSGPSGSEIYQETLSKALA 501
Query: 735 KYFGARLLIVDSLLLPGEFLTKDSVSSKEDLNLEKSGSFSK---QRFASQQKKQASSVEA 565
K+FGARLLIVDSL LPG +K+ S+KE E+ +K Q KK SSV+A
Sbjct: 502 KHFGARLLIVDSLSLPGGTPSKEVDSAKESSKPERPAVLAKRSGQASTLHHKKPTSSVDA 561
Query: 564 DIVGSSTLNPQGLPKQETSTASSNNHTPKTGDRVKYMGNIHPCGFPPL------QPISRA 403
+I+G STL+ Q + KQE STASS K GDRVK++GN FPP S
Sbjct: 562 EIIGGSTLSSQAMLKQEVSTASSKGTALKKGDRVKFVGN-----FPPTVSSLQNYASSSR 616
Query: 402 GLPHGHKAKVILALKKHGSSKFGVRFDKALPEDGLLG------------------LENPV 277
G +G + KV+LA + + SSK GVRFDK++P+ LG +E+
Sbjct: 617 GPSYGFRGKVVLAFEDNESSKIGVRFDKSIPDGNDLGGHIEDDHGFFCSANHLQRIESAG 676
Query: 276 VDDVDNLAIDELFEVAYSESKTGPLILFVKEIEKSMLGSKEAYTSLKAKLENLPEDVVVI 97
DD D +AI+E+FEVA ++ KTG L+LF+K+IEK+M G+ + LK+K E LP+++VVI
Sbjct: 677 GDD-DKVAINEIFEVASNQCKTGALVLFIKDIEKAMAGNTDV---LKSKFETLPQNIVVI 732
Query: 96 ISSTQID-RKDKSHLGGLLFTKFGSNPTALLD 4
S+TQ+D RK+K+H GGLLFTKFGSN TALLD
Sbjct: 733 GSNTQLDSRKEKTHPGGLLFTKFGSNQTALLD 764