BLASTX nr result

ID: Coptis23_contig00014384 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014384
         (1307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38910.3| unnamed protein product [Vitis vinifera]              144   5e-32
ref|XP_002274864.1| PREDICTED: uncharacterized protein LOC100262...   143   8e-32
ref|XP_002326987.1| predicted protein [Populus trichocarpa] gi|2...   137   6e-30
ref|XP_003521981.1| PREDICTED: uncharacterized protein LOC100806...   131   3e-28
gb|AFK38876.1| unknown [Medicago truncatula]                          128   3e-27

>emb|CBI38910.3| unnamed protein product [Vitis vinifera]
          Length = 292

 Score =  144 bits (363), Expect = 5e-32
 Identities = 82/171 (47%), Positives = 106/171 (61%), Gaps = 3/171 (1%)
 Frame = -1

Query: 671 ARKGKSKTSLNKSTRKKKNPVQKRXXXXXXXXXXEALKKAIALSLGGSLEISCPLPHGPP 492
           AR  K K   +K   KKK PVQK           +ALK+AIALSL      +  L  GP 
Sbjct: 110 ARVQKVKNRTSKP--KKKVPVQKISSNSEFVDDDDALKQAIALSLKDCPVATDRLQSGPS 167

Query: 491 QNCRVNF---ELEERKEGNLVQENDXXXXXXXXXXXRVQMTKDQVIVHFFQFDEAGKGGV 321
           Q+           ERK    +QE             RVQMT+D++++HFFQFDEAGKGG+
Sbjct: 168 QSSDAGVLDDTKSERKGKAQIQEGSGRRKRKKPITSRVQMTEDELVIHFFQFDEAGKGGI 227

Query: 320 SVKDLRKVAIDHDFVWSDKEMADMIHLFDSDGDGKVSLDDFRKILYRCNMI 168
           +++DL+++A  HDF W+DKEMADMIH FDSDGDGK+SL+DF+KI+ RCNM+
Sbjct: 228 TLRDLQRMAYTHDFTWTDKEMADMIHCFDSDGDGKLSLEDFQKIVSRCNML 278


>ref|XP_002274864.1| PREDICTED: uncharacterized protein LOC100262506 [Vitis vinifera]
          Length = 304

 Score =  143 bits (361), Expect = 8e-32
 Identities = 78/159 (49%), Positives = 101/159 (63%), Gaps = 3/159 (1%)
 Frame = -1

Query: 635 STRKKKNPVQKRXXXXXXXXXXEALKKAIALSLGGSLEISCPLPHGPPQNCRVNF---EL 465
           S  KKK PVQK           +ALK+AIALSL      +  L  GP Q+          
Sbjct: 132 SKPKKKVPVQKISSNSEFVDDDDALKQAIALSLKDCPVATDRLQSGPSQSSDAGVLDDTK 191

Query: 464 EERKEGNLVQENDXXXXXXXXXXXRVQMTKDQVIVHFFQFDEAGKGGVSVKDLRKVAIDH 285
            ERK    +QE             RVQMT+D++++HFFQFDEAGKGG++++DL+++A  H
Sbjct: 192 SERKGKAQIQEGSGRRKRKKPITSRVQMTEDELVIHFFQFDEAGKGGITLRDLQRMAYTH 251

Query: 284 DFVWSDKEMADMIHLFDSDGDGKVSLDDFRKILYRCNMI 168
           DF W+DKEMADMIH FDSDGDGK+SL+DF+KI+ RCNM+
Sbjct: 252 DFTWTDKEMADMIHCFDSDGDGKLSLEDFQKIVSRCNML 290


>ref|XP_002326987.1| predicted protein [Populus trichocarpa] gi|222835302|gb|EEE73737.1|
           predicted protein [Populus trichocarpa]
          Length = 270

 Score =  137 bits (345), Expect = 6e-30
 Identities = 83/170 (48%), Positives = 103/170 (60%), Gaps = 2/170 (1%)
 Frame = -1

Query: 671 ARKGKSKTSLNKSTRKKKNPVQKRXXXXXXXXXXE-ALKKAIALSLGGSLEISCPLPHGP 495
           +R+ K K    KS++ KKNPVQK           +  L +AIALSL  S   + P     
Sbjct: 113 SRRSKDK---RKSSKPKKNPVQKHVSGADYIYGDDDELMQAIALSLHDSANDATP----- 164

Query: 494 PQNCRVNFELEERKEGNLVQEN-DXXXXXXXXXXXRVQMTKDQVIVHFFQFDEAGKGGVS 318
                     +ERK    VQE+             RVQMT+D +I+HFFQFDEAGKG ++
Sbjct: 165 ----------KERKVDAQVQEDAGRKKRKKAQFSSRVQMTEDDLILHFFQFDEAGKGAIT 214

Query: 317 VKDLRKVAIDHDFVWSDKEMADMIHLFDSDGDGKVSLDDFRKILYRCNMI 168
           ++DLR+VAI HDF W+DKE+ADMIH FD DGDGK+SLDDFRKI  RCNMI
Sbjct: 215 MRDLRRVAIAHDFTWTDKELADMIHCFDGDGDGKLSLDDFRKIAGRCNMI 264


>ref|XP_003521981.1| PREDICTED: uncharacterized protein LOC100806103 [Glycine max]
          Length = 292

 Score =  131 bits (330), Expect = 3e-28
 Identities = 71/135 (52%), Positives = 93/135 (68%)
 Frame = -1

Query: 566 ALKKAIALSLGGSLEISCPLPHGPPQNCRVNFELEERKEGNLVQENDXXXXXXXXXXXRV 387
           AL++AIALSL  S E S    + P +N  VN    E+K    VQE+            R+
Sbjct: 162 ALRQAIALSLQDSAEGS----YLPDKNV-VNTSKTEKKGSGHVQEDKGRKKNKKSFASRL 216

Query: 386 QMTKDQVIVHFFQFDEAGKGGVSVKDLRKVAIDHDFVWSDKEMADMIHLFDSDGDGKVSL 207
           Q+T+D++IVHFFQ DEAGKG +SV+D+++ A  HDF+W+DKE+ DMI  FDSDGDGK+SL
Sbjct: 217 QLTEDELIVHFFQLDEAGKGTISVRDIQRAATAHDFLWTDKELVDMIRYFDSDGDGKLSL 276

Query: 206 DDFRKILYRCNMIPG 162
           DDFRKI+ RCN+I G
Sbjct: 277 DDFRKIVVRCNLIKG 291


>gb|AFK38876.1| unknown [Medicago truncatula]
          Length = 292

 Score =  128 bits (322), Expect = 3e-27
 Identities = 81/173 (46%), Positives = 100/173 (57%), Gaps = 3/173 (1%)
 Frame = -1

Query: 671 ARKGKSKTSLNKSTRKKKNPVQKRXXXXXXXXXXE--ALKKAIALSLGGSLEIS-CPLPH 501
           +RK K K   NKS R K     K+          E  AL +AIALSL  S E S C    
Sbjct: 125 SRKRKVK---NKSLRVKSRVTGKKHGGTSENVDEEEEALMQAIALSLQDSAEASFCS--- 178

Query: 500 GPPQNCRVNFELEERKEGNLVQENDXXXXXXXXXXXRVQMTKDQVIVHFFQFDEAGKGGV 321
                   N    E+K    +QE+            R+QMT+D++IVHFFQ DEAGKG V
Sbjct: 179 ---NKTIGNISKAEKKGSIQIQEDKGRKKNKKSFASRLQMTEDELIVHFFQLDEAGKGTV 235

Query: 320 SVKDLRKVAIDHDFVWSDKEMADMIHLFDSDGDGKVSLDDFRKILYRCNMIPG 162
           +++DL K AI HDF W+DKE+ DMI  FDSDGDG++SLDDFRKI+ RCN+I G
Sbjct: 236 TIRDLEKAAITHDFSWTDKELVDMIRCFDSDGDGRLSLDDFRKIVVRCNLIKG 288


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