BLASTX nr result

ID: Coptis23_contig00014372 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014372
         (236 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271882.1| PREDICTED: F-box/kelch-repeat protein At1g22...   127   9e-28
ref|XP_003531046.1| PREDICTED: F-box/kelch-repeat protein At1g22...   126   2e-27
emb|CBI19111.3| unnamed protein product [Vitis vinifera]              126   2e-27
ref|XP_002285816.1| PREDICTED: F-box/kelch-repeat protein At1g22...   126   2e-27
emb|CAN63480.1| hypothetical protein VITISV_011508 [Vitis vinifera]   126   2e-27

>ref|XP_002271882.1| PREDICTED: F-box/kelch-repeat protein At1g22040-like [Vitis
           vinifera]
          Length = 479

 Score =  127 bits (319), Expect = 9e-28
 Identities = 57/77 (74%), Positives = 70/77 (90%)
 Frame = +2

Query: 5   DNPRLIPNLPDEISIQILARLPRIYYLNVKLVSRTWKNAVTGTELFDLRKELGISEEWLY 184
           +N RLIPNLPDEIS QILAR+PRI+YLNV+LVSR+WK A+  TELF+LRKELG +EEWLY
Sbjct: 40  ENVRLIPNLPDEISFQILARVPRIFYLNVRLVSRSWKGAIMSTELFNLRKELGTTEEWLY 99

Query: 185 ILTKVEEDKLLWHAFDP 235
           ILTK+++DKLLW++ DP
Sbjct: 100 ILTKIKDDKLLWYSLDP 116


>ref|XP_003531046.1| PREDICTED: F-box/kelch-repeat protein At1g22040-like [Glycine max]
          Length = 481

 Score =  126 bits (316), Expect = 2e-27
 Identities = 59/78 (75%), Positives = 66/78 (84%)
 Frame = +2

Query: 2   EDNPRLIPNLPDEISIQILARLPRIYYLNVKLVSRTWKNAVTGTELFDLRKELGISEEWL 181
           EDNPRLIP+LPDEISIQILAR+PRIYYLN+KLV R WK     +ELF +RKELG  EEWL
Sbjct: 37  EDNPRLIPSLPDEISIQILARVPRIYYLNLKLVCRAWKETFVSSELFCVRKELGSMEEWL 96

Query: 182 YILTKVEEDKLLWHAFDP 235
           YILTKV +DKLLW+A DP
Sbjct: 97  YILTKVNDDKLLWYALDP 114


>emb|CBI19111.3| unnamed protein product [Vitis vinifera]
          Length = 274

 Score =  126 bits (316), Expect = 2e-27
 Identities = 59/78 (75%), Positives = 68/78 (87%)
 Frame = +2

Query: 2   EDNPRLIPNLPDEISIQILARLPRIYYLNVKLVSRTWKNAVTGTELFDLRKELGISEEWL 181
           E+NPRLIP+LPDEISI ILARLPRI Y +++LVSR WK  +T  ELF+LRKELG +EEWL
Sbjct: 37  EENPRLIPSLPDEISILILARLPRICYFDLRLVSRNWKATITSPELFNLRKELGKTEEWL 96

Query: 182 YILTKVEEDKLLWHAFDP 235
           YILTKVEED+LLWHA DP
Sbjct: 97  YILTKVEEDRLLWHALDP 114


>ref|XP_002285816.1| PREDICTED: F-box/kelch-repeat protein At1g22040 [Vitis vinifera]
          Length = 477

 Score =  126 bits (316), Expect = 2e-27
 Identities = 59/78 (75%), Positives = 68/78 (87%)
 Frame = +2

Query: 2   EDNPRLIPNLPDEISIQILARLPRIYYLNVKLVSRTWKNAVTGTELFDLRKELGISEEWL 181
           E+NPRLIP+LPDEISI ILARLPRI Y +++LVSR WK  +T  ELF+LRKELG +EEWL
Sbjct: 37  EENPRLIPSLPDEISILILARLPRICYFDLRLVSRNWKATITSPELFNLRKELGKTEEWL 96

Query: 182 YILTKVEEDKLLWHAFDP 235
           YILTKVEED+LLWHA DP
Sbjct: 97  YILTKVEEDRLLWHALDP 114


>emb|CAN63480.1| hypothetical protein VITISV_011508 [Vitis vinifera]
          Length = 499

 Score =  126 bits (316), Expect = 2e-27
 Identities = 56/77 (72%), Positives = 70/77 (90%)
 Frame = +2

Query: 5   DNPRLIPNLPDEISIQILARLPRIYYLNVKLVSRTWKNAVTGTELFDLRKELGISEEWLY 184
           +N RLIPNLPDEIS QILAR+PRI+YLN++LVSR+WK A+  TELF+LRKELG +EEWLY
Sbjct: 40  ENVRLIPNLPDEISFQILARVPRIFYLNMRLVSRSWKGAIMSTELFNLRKELGTTEEWLY 99

Query: 185 ILTKVEEDKLLWHAFDP 235
           ILTK+++DKLLW++ DP
Sbjct: 100 ILTKIKDDKLLWYSLDP 116


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