BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014364
         (904 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|2...   105   1e-20
ref|XP_003599874.1| F-box family-3 [Medicago truncatula] gi|3554...    87   4e-15
ref|XP_003607639.1| F-box/LRR-repeat protein [Medicago truncatul...    82   2e-13
ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|2...    82   2e-13
ref|XP_003610665.1| F-box/LRR-repeat protein [Medicago truncatul...    82   2e-13

>ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|222859667|gb|EEE97214.1|
           predicted protein [Populus trichocarpa]
          Length = 460

 Score =  105 bits (263), Expect = 1e-20
 Identities = 75/226 (33%), Positives = 115/226 (50%), Gaps = 5/226 (2%)
 Frame = +2

Query: 2   LLLNDAPFIHKFCLSSKTVLDKSRINAWISNVLKRQVQVLILNLRVGLAPLVLPHTLFNW 181
           L L     I +F LS +   D SR+  WIS  + R V+ L L LR   A  VLPH LFN 
Sbjct: 89  LALRGPSNIVQFYLSCEVKDDPSRVGTWISAAVNRNVKDLYLELRDFEASFVLPHCLFNC 148

Query: 182 ESLTIIKLCAESVLKVPASISFSRLKVLHLDDIEVFCDQAIQHVSLSCPILEELVFLNCR 361
           E+LT +++    +LK+P+SIS S LK+L+L ++ +F D        S P L EL    C 
Sbjct: 149 ETLTELEINMPYILKLPSSISLSCLKILNLYEV-IFTDDHSTQQLFSLPNLVELEIHECN 207

Query: 362 WLKMKAINISAPVLKRLVILDILEHKD-SFHDCEIKVYAESLVSLELDCNMAYELSLYNL 538
           W+ + A++ISAP L+ L I +  +    S   C ++++   L    +   ++ +  LY  
Sbjct: 208 WMNLVAVSISAPKLQSLDIHEPCQSSPASLGGCHVRIFGTHLADFTIIGTLSNDYCLYE- 266

Query: 539 FSLFNASIDICST----RKIGQRVDKLLKAICDVKDLRLSDDSIEV 664
            S+    I I S     R+   R  KLL+ I   + L L+ + ++V
Sbjct: 267 SSVVETCISIFSAADKPRQTAYRASKLLEGISSAQSLCLTTNVVDV 312


>ref|XP_003599874.1| F-box family-3 [Medicago truncatula] gi|355488922|gb|AES70125.1|
           F-box family-3 [Medicago truncatula]
          Length = 642

 Score = 87.4 bits (215), Expect = 4e-15
 Identities = 61/205 (29%), Positives = 106/205 (51%), Gaps = 5/205 (2%)
 Frame = +2

Query: 50  KTVLDKSRINAWISNVLKRQVQVLILNLRVGLAPLVLPHTLFNWESLTIIKLCAESVLKV 229
           ++ +D  ++++ IS+    ++Q L L+L       VLPH+   +ESL  ++L  +  L +
Sbjct: 270 RSSIDTDKVSSIISSAANHKLQYLDLSLGDRNDNFVLPHSFPAFESLNELRLGLQFTLHI 329

Query: 230 PASISFSRLKVLHLDDIEVFCDQAIQHVSLSCPILEELVFLNCRWLKMKAINISAPVLKR 409
           P+ I F  LK L + ++    + + Q +   CP+L+EL   NC W  +  I++S   L++
Sbjct: 330 PSGICFPILKTLVVTNVTFANENSAQQLFSGCPVLQELELDNCYWEHINQISLSISTLRK 389

Query: 410 LVILDILEHKDSFHDCEIKVYAESLVSLELDCNMAYELSLYNLFSLFNASIDI-----CS 574
           L I  ++   D  H  ++K+ A +L+SL   CN   E+   NL SL +A I +       
Sbjct: 390 LTISYLMLCVDYDHIMKLKIDAVNLLSLYCICNPIIEVIPVNLTSLVDAFIFLGYVYPHD 449

Query: 575 TRKIGQRVDKLLKAICDVKDLRLSD 649
                Q   +LLK +  VK L+L+D
Sbjct: 450 EPYAAQCSIELLKGLGSVKSLKLND 474


>ref|XP_003607639.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355508694|gb|AES89836.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 467

 Score = 82.0 bits (201), Expect = 2e-13
 Identities = 60/211 (28%), Positives = 104/211 (49%), Gaps = 8/211 (3%)
 Frame = +2

Query: 53  TVLDKSRINAWISNVLKRQVQVLILNLRVGLAPLVLPHTLFNWESLTIIKLCAESVLKVP 232
           T++D  ++++ +S+ L   V  L LNL    +  VLP++     SLT + +    +  VP
Sbjct: 106 TIVDAGKVSSMLSSALMHDVHDLTLNLESENSRFVLPNSFSASRSLTKLDIVFGFLDSVP 165

Query: 233 ASISFSRLKVLHLDDIEVFCDQAIQHVSLSCPILEELVFLNCRWLKMKAINISAPVLKRL 412
             I F  LK+L    +    +++ Q +   CP+L++L F  C W+ +  I+++ P LK+ 
Sbjct: 166 DGICFPSLKILSFAHVTFTNEKSAQRLFSGCPVLQDLSFEKCYWVNIN-ISVAIPTLKK- 223

Query: 413 VILDILEHKDSF--HDCEIKVYAESLVSLELDCNMAYELSLYNLFSLFNASIDI---C-- 571
             LDI     S   + C  K+ A +L+SL    N      L N  S+ +A+ID+   C  
Sbjct: 224 --LDIFFRSSSLDRNSCMFKIDAVNLLSLSYKSNPTINCFLVNSTSIVDANIDLGFFCVQ 281

Query: 572 -STRKIGQRVDKLLKAICDVKDLRLSDDSIE 661
            +   +     +L   +  V+ LRLSD +I+
Sbjct: 282 NNELHVAVFAIELFSRLGSVESLRLSDQTIQ 312


>ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|222859666|gb|EEE97213.1|
           predicted protein [Populus trichocarpa]
          Length = 420

 Score = 82.0 bits (201), Expect = 2e-13
 Identities = 68/230 (29%), Positives = 108/230 (46%), Gaps = 9/230 (3%)
 Frame = +2

Query: 2   LLLNDAPFIHKFCLSSKTVLDKSRINAWISNVLKRQVQVLILNLRVG--LAPLVLPHTLF 175
           LLL D+  I KF LS   + D +R   W+S  + R V+ L +N   G      V P  LF
Sbjct: 102 LLLRDSSNIEKFTLSCG-IDDATRTRTWVSAAVNRNVKELCVNFYEGGESESFVSPLCLF 160

Query: 176 NWESLTIIKLCAESVLKVPASISFSRLKVLHLDDIEVFCDQAIQHVSLSCPILEELVFLN 355
              +LT +K+ +  VL++ +SIS   LK+L L  + VF D+      L+   LE+L    
Sbjct: 161 TCATLTKLKITSHGVLRLSSSISLPCLKILSLQHV-VFPDEDSTQQILNLRTLEKLKISY 219

Query: 356 CRWLKMKAINISAPVLKRLVILDILEHKDSFHD---CEIKVYAESLVSLELDCNMAYELS 526
             W  +KAI ISAP L+ L I ++  H++       C + ++  +L           +  
Sbjct: 220 YDWKNLKAITISAPKLRSLDICEM--HRNDLRGSDACHVMIFGTALTFFSFSGGFWDDYC 277

Query: 527 LYNLFSLFNASIDICS----TRKIGQRVDKLLKAICDVKDLRLSDDSIEV 664
           L+   SL  A   +      +R+I  R  K +  +  VK L L+ D +++
Sbjct: 278 LFKSSSLVEAYFHVYGCYERSREIAHRAYKHIVGLSTVKHLTLTPDVLKI 327


>ref|XP_003610665.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355512000|gb|AES93623.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 489

 Score = 81.6 bits (200), Expect = 2e-13
 Identities = 65/248 (26%), Positives = 108/248 (43%), Gaps = 36/248 (14%)
 Frame = +2

Query: 26  IHKFCLSSKTVLDKSRINAWISNVLKRQVQVLILNLRVGLAPLVLPHTLFNWESLTIIKL 205
           + KF L  +  ++  R+  W+S  +   ++ L L L     PLVL    F  E LT  +L
Sbjct: 95  LKKFSLFFEVGMEAPRVTKWLSIFVNPNIEELKLELYTVKEPLVLSDQFFTSEKLTKFEL 154

Query: 206 CAESVLKVPASISFSRLKVLHLDDIEVFCDQAIQHVSLSCPILEELVFLNCRWLKMKAIN 385
               V+K+P++I+F  L  L L  +            LS   L+E+  ++C W K+  I 
Sbjct: 155 SMSQVIKLPSTINFQNLVTLTLKHVIFPNYYCTTEFFLSLRSLKEMTLIDCNWKKVGTII 214

Query: 386 ISAPVLKRLVILDILEH--KDSFHDCE------------------------------IKV 469
           I+ P+L++L I D  +H  +D  HD E                              I++
Sbjct: 215 ITCPLLQKLFIRDWKDHDDEDDHHDNEEEVEEELAEELNNDVNDITAVENLNYHHGLIRI 274

Query: 470 YAESLVSLELDCNMAYELSLYNLFSLFNASIDICSTRK----IGQRVDKLLKAICDVKDL 637
            +  LVS   D ++  + SL+  FS+ NA+I +          G  + KL  A+  V  L
Sbjct: 275 LSNELVSFTYDGDLMNDYSLFYTFSVSNATIKLHEQHNNMLHAGHFIYKLFIALSGVTKL 334

Query: 638 RLSDDSIE 661
            +SD +++
Sbjct: 335 SVSDFALQ 342