BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014360
         (1669 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAS55787.1| hypothetical protein [Oryza sativa Japonica Group...    59   3e-06
gb|AAO00713.1| retrotransposon protein, putative, unclassified [...    58   9e-06
gb|AAP54692.2| retrotransposon protein, putative, unclassified [...    58   9e-06

>gb|AAS55787.1| hypothetical protein [Oryza sativa Japonica Group]
            gi|54291856|gb|AAV32224.1| hypothetical protein [Oryza
            sativa Japonica Group]
          Length = 1936

 Score = 59.3 bits (142), Expect = 3e-06
 Identities = 28/79 (35%), Positives = 46/79 (58%)
 Frame = +3

Query: 1158 GIGTTTAVQQLKDLMGRFNVDIVYLSETKASQEGIGRLSKKLKLSGYFAVPALGLSGGLA 1337
            G+G T  VQ L+ L+ +    +V+L ET+ S E + RL +KL   G+  V + G SGGLA
Sbjct: 645  GLGNTATVQDLRALIQKAGSQLVFLCETRQSVEKMSRLRRKLAFRGFVGVSSEGKSGGLA 704

Query: 1338 VLWKEGVDLEILGASRNQV 1394
            + W E V +++   ++  +
Sbjct: 705  LYWDESVSVDVKDINKRYI 723


>gb|AAO00713.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1557

 Score = 57.8 bits (138), Expect = 9e-06
 Identities = 31/72 (43%), Positives = 43/72 (59%)
 Frame = +3

Query: 1158 GIGTTTAVQQLKDLMGRFNVDIVYLSETKASQEGIGRLSKKLKLSGYFAVPALGLSGGLA 1337
            GIG  T VQ+L  L+   +   V+L ET+   + I RL  +L L G+  V + G+SGGLA
Sbjct: 443  GIGNATTVQELCALVKEASSQFVFLCETRQPVDKIKRLRNRLGLRGFAGVSSDGMSGGLA 502

Query: 1338 VLWKEGVDLEIL 1373
            + W E V +EIL
Sbjct: 503  LFWHESVHVEIL 514


>gb|AAP54692.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1585

 Score = 57.8 bits (138), Expect = 9e-06
 Identities = 31/72 (43%), Positives = 43/72 (59%)
 Frame = +3

Query: 1158 GIGTTTAVQQLKDLMGRFNVDIVYLSETKASQEGIGRLSKKLKLSGYFAVPALGLSGGLA 1337
            GIG  T VQ+L  L+   +   V+L ET+   + I RL  +L L G+  V + G+SGGLA
Sbjct: 471  GIGNATTVQELCALVKEASSQFVFLCETRQPVDKIKRLRNRLGLRGFAGVSSDGMSGGLA 530

Query: 1338 VLWKEGVDLEIL 1373
            + W E V +EIL
Sbjct: 531  LFWHESVHVEIL 542