BLASTX nr result

ID: Coptis23_contig00014358 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014358
         (849 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526979.1| protein with unknown function [Ricinus commu...   207   9e-71
ref|XP_002283420.1| PREDICTED: mitochondrial substrate carrier f...   200   3e-68
emb|CAN80165.1| hypothetical protein VITISV_033618 [Vitis vinifera]   200   2e-66
ref|XP_002330978.1| predicted protein [Populus trichocarpa] gi|2...   190   2e-65
ref|XP_003524755.1| PREDICTED: mitochondrial carnitine/acylcarni...   184   2e-63

>ref|XP_002526979.1| protein with unknown function [Ricinus communis]
           gi|223533670|gb|EEF35406.1| protein with unknown
           function [Ricinus communis]
          Length = 378

 Score =  207 bits (527), Expect(2) = 9e-71
 Identities = 112/209 (53%), Positives = 133/209 (63%), Gaps = 1/209 (0%)
 Frame = -3

Query: 847 TSAS-CPSASASFRNKCTSPVTAKLLHGYSPNKMALDNTVGLLSSLPTKHPNMVGSLKEY 671
           TSAS  P +++   NK  SP+  KLLHGY+P+K+AL+N+  LLS+L  KHPN+VG+L+EY
Sbjct: 137 TSASRLPRSTSVTGNKAVSPLIDKLLHGYTPDKIALNNSAALLSTLSAKHPNLVGALQEY 196

Query: 670 PWMMTGSGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVHEVKRTADIISLEGW 491
           PWMMTGSGK                                  SV +V++T+ IISLEGW
Sbjct: 197 PWMMTGSGKAP--------------------------------SVSDVQKTSSIISLEGW 224

Query: 490 RTLWRGLRSGVVRDSVFGGMFFSSWQFLHIAMLEWKAAGMDPPPRSVEEIGVLSPWXXXX 311
             LWRGLRSG+VRDSV+ G+FFSSWQFLH AMLEWKA GM+P PRS EEIG LSP     
Sbjct: 225 GALWRGLRSGIVRDSVYAGIFFSSWQFLHRAMLEWKAVGMNPLPRSDEEIGPLSPVAVSL 284

Query: 310 XXXXXXXXXXXXSHCFDTAKSRSQCIVLP 224
                       SHCFDTAKSRSQC VLP
Sbjct: 285 AAGFSGSAAAAASHCFDTAKSRSQCTVLP 313



 Score = 86.7 bits (213), Expect(2) = 9e-71
 Identities = 42/54 (77%), Positives = 46/54 (85%)
 Frame = -2

Query: 164 SMERRLLKWKQPGYWVERVSGIHPKDRNILFRGIGLRMARSGLASFAIVGSYYM 3
           SMERRLLKW +PG   ER++GIHP DRNILFRGI LRMARSGLAS  IVGSYY+
Sbjct: 317 SMERRLLKWNRPGKRFERLTGIHPADRNILFRGIWLRMARSGLASVMIVGSYYL 370


>ref|XP_002283420.1| PREDICTED: mitochondrial substrate carrier family protein W [Vitis
           vinifera] gi|302143540|emb|CBI22101.3| unnamed protein
           product [Vitis vinifera]
          Length = 377

 Score =  200 bits (509), Expect(2) = 3e-68
 Identities = 108/209 (51%), Positives = 130/209 (62%), Gaps = 1/209 (0%)
 Frame = -3

Query: 847 TSASC-PSASASFRNKCTSPVTAKLLHGYSPNKMALDNTVGLLSSLPTKHPNMVGSLKEY 671
           TSAS  PS+ +        P  A+LLHGY+P++ AL+++VGLLS+L +KHPNM+G+L+EY
Sbjct: 137 TSASLIPSSRSVAEKSAVVPSIARLLHGYTPDQKALNHSVGLLSTLTSKHPNMIGALQEY 196

Query: 670 PWMMTGSGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVHEVKRTADIISLEGW 491
           PWMMTGSG+                                   V  V+R  D+ISLEGW
Sbjct: 197 PWMMTGSGRPPP--------------------------------VFHVRRPLDVISLEGW 224

Query: 490 RTLWRGLRSGVVRDSVFGGMFFSSWQFLHIAMLEWKAAGMDPPPRSVEEIGVLSPWXXXX 311
             LWRGLRSGVVRD++FGG+FFS WQFLH AML+WKAAGMDP PRS +EIG LSP     
Sbjct: 225 GALWRGLRSGVVRDTIFGGVFFSLWQFLHRAMLDWKAAGMDPSPRSDDEIGPLSPLAVSL 284

Query: 310 XXXXXXXXXXXXSHCFDTAKSRSQCIVLP 224
                       SH FDTAKSRSQCIVLP
Sbjct: 285 AAGFSGSVAAAASHSFDTAKSRSQCIVLP 313



 Score = 85.1 bits (209), Expect(2) = 3e-68
 Identities = 38/54 (70%), Positives = 44/54 (81%)
 Frame = -2

Query: 164 SMERRLLKWKQPGYWVERVSGIHPKDRNILFRGIGLRMARSGLASFAIVGSYYM 3
           S ERRLLKWKQPG W ER +GIHP DR++L RGI LRM RSG ASF +VGSY++
Sbjct: 317 STERRLLKWKQPGRWYERYTGIHPSDRSLLHRGIWLRMGRSGFASFLVVGSYFL 370


>emb|CAN80165.1| hypothetical protein VITISV_033618 [Vitis vinifera]
          Length = 828

 Score =  200 bits (509), Expect(2) = 2e-66
 Identities = 108/209 (51%), Positives = 130/209 (62%), Gaps = 1/209 (0%)
 Frame = -3

Query: 847 TSASC-PSASASFRNKCTSPVTAKLLHGYSPNKMALDNTVGLLSSLPTKHPNMVGSLKEY 671
           TSAS  PS+ +        P  A+LLHGY+P++ AL+++VGLLS+L +KHPNM+G+L+EY
Sbjct: 43  TSASLIPSSRSVAEKSAVVPSIARLLHGYTPDQKALNHSVGLLSTLTSKHPNMIGALQEY 102

Query: 670 PWMMTGSGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVHEVKRTADIISLEGW 491
           PWMMTGSG+                                   V  V+R  D+ISLEGW
Sbjct: 103 PWMMTGSGRPPP--------------------------------VFHVRRPLDVISLEGW 130

Query: 490 RTLWRGLRSGVVRDSVFGGMFFSSWQFLHIAMLEWKAAGMDPPPRSVEEIGVLSPWXXXX 311
             LWRGLRSGVVRD++FGG+FFS WQFLH AML+WKAAGMDP PRS +EIG LSP     
Sbjct: 131 GALWRGLRSGVVRDTIFGGVFFSLWQFLHRAMLDWKAAGMDPSPRSDDEIGPLSPLAVSL 190

Query: 310 XXXXXXXXXXXXSHCFDTAKSRSQCIVLP 224
                       SH FDTAKSRSQCIVLP
Sbjct: 191 AAGFSGSVAAAASHSFDTAKSRSQCIVLP 219



 Score = 79.0 bits (193), Expect(2) = 2e-66
 Identities = 36/50 (72%), Positives = 40/50 (80%)
 Frame = -2

Query: 164 SMERRLLKWKQPGYWVERVSGIHPKDRNILFRGIGLRMARSGLASFAIVG 15
           S ERRLLKWKQPG W ER +GIHP DR++L RGI LRM RSG ASF +VG
Sbjct: 223 STERRLLKWKQPGRWYERYTGIHPSDRSLLHRGIWLRMGRSGFASFLVVG 272


>ref|XP_002330978.1| predicted protein [Populus trichocarpa] gi|222872770|gb|EEF09901.1|
           predicted protein [Populus trichocarpa]
          Length = 376

 Score =  190 bits (482), Expect(2) = 2e-65
 Identities = 102/209 (48%), Positives = 126/209 (60%), Gaps = 1/209 (0%)
 Frame = -3

Query: 847 TSAS-CPSASASFRNKCTSPVTAKLLHGYSPNKMALDNTVGLLSSLPTKHPNMVGSLKEY 671
           TSAS  P ++    N+  +P+ AKLL G++P+K AL++ V LLS+L +KHPN+ G+L EY
Sbjct: 137 TSASRVPRSTPVTENRAVAPIIAKLLPGHTPDKKALNHFVTLLSTLTSKHPNLAGALLEY 196

Query: 670 PWMMTGSGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVHEVKRTADIISLEGW 491
           PWMMTGSGK                                  SV +V++ + IISLEGW
Sbjct: 197 PWMMTGSGKAP--------------------------------SVCDVRKPSSIISLEGW 224

Query: 490 RTLWRGLRSGVVRDSVFGGMFFSSWQFLHIAMLEWKAAGMDPPPRSVEEIGVLSPWXXXX 311
             LWRG+RSG+VRDS+FGG+FFS WQF+H  ML WKA GMDP PRS EE+G LSP     
Sbjct: 225 GALWRGIRSGLVRDSIFGGVFFSGWQFMHDVMLNWKAVGMDPIPRSNEEVGSLSPLSVSL 284

Query: 310 XXXXXXXXXXXXSHCFDTAKSRSQCIVLP 224
                       SHCFDTAK RSQC VLP
Sbjct: 285 AAGFSGSIAAAASHCFDTAKCRSQCTVLP 313



 Score = 85.9 bits (211), Expect(2) = 2e-65
 Identities = 40/54 (74%), Positives = 45/54 (83%)
 Frame = -2

Query: 164 SMERRLLKWKQPGYWVERVSGIHPKDRNILFRGIGLRMARSGLASFAIVGSYYM 3
           SMER LL+W +PG   ER +GIHP DRNILFRG+GLRMARSG ASF IVGSYY+
Sbjct: 317 SMERNLLRWTRPGNRFERYTGIHPADRNILFRGLGLRMARSGFASFMIVGSYYL 370


>ref|XP_003524755.1| PREDICTED: mitochondrial carnitine/acylcarnitine carrier protein
           CACL-like [Glycine max]
          Length = 380

 Score =  184 bits (467), Expect(2) = 2e-63
 Identities = 97/203 (47%), Positives = 120/203 (59%)
 Frame = -3

Query: 832 PSASASFRNKCTSPVTAKLLHGYSPNKMALDNTVGLLSSLPTKHPNMVGSLKEYPWMMTG 653
           PS++ +      +P+ A+LLHG  P++ ALD  +GL+S+L  K+ N+  +L EYPW MTG
Sbjct: 143 PSSNFALEKGARTPLIARLLHGCYPDRRALDQYIGLISTLKAKNTNLTSALLEYPWTMTG 202

Query: 652 SGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVHEVKRTADIISLEGWRTLWRG 473
           SG                                   SV  V+R +DIISLEGW TLWRG
Sbjct: 203 SGSPP--------------------------------SVSNVRRPSDIISLEGWSTLWRG 230

Query: 472 LRSGVVRDSVFGGMFFSSWQFLHIAMLEWKAAGMDPPPRSVEEIGVLSPWXXXXXXXXXX 293
           LRSG+VRDSVFGG+FFS+WQFLH AML+WKAAGM+PPPR  EE+G LSP           
Sbjct: 231 LRSGIVRDSVFGGVFFSTWQFLHQAMLDWKAAGMNPPPRLNEEVGPLSPLTVSLTAGFSA 290

Query: 292 XXXXXXSHCFDTAKSRSQCIVLP 224
                 SH FDT +SRSQC VLP
Sbjct: 291 SVAAAASHSFDTTRSRSQCTVLP 313



 Score = 85.1 bits (209), Expect(2) = 2e-63
 Identities = 39/52 (75%), Positives = 45/52 (86%)
 Frame = -2

Query: 164 SMERRLLKWKQPGYWVERVSGIHPKDRNILFRGIGLRMARSGLASFAIVGSY 9
           SMER++LKWK+PG   ER++GIHP DR +LFRGIG RMARSGLASF IVGSY
Sbjct: 317 SMERKILKWKRPGNKFERITGIHPSDRGVLFRGIGWRMARSGLASFIIVGSY 368


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