BLASTX nr result

ID: Coptis23_contig00014339 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014339
         (1163 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81672.1| hypothetical protein VITISV_000588 [Vitis vinifera]   110   9e-22
gb|AAM62582.1| unknown [Arabidopsis thaliana]                          80   7e-13
ref|XP_002302840.1| predicted protein [Populus trichocarpa] gi|2...    80   1e-12
ref|NP_564042.1| Aminotransferase-like, plant mobile domain fami...    79   2e-12
ref|XP_004143807.1| PREDICTED: serine/threonine-protein phosphat...    78   5e-12

>emb|CAN81672.1| hypothetical protein VITISV_000588 [Vitis vinifera]
          Length = 689

 Score =  110 bits (274), Expect = 9e-22
 Identities = 65/176 (36%), Positives = 96/176 (54%), Gaps = 3/176 (1%)
 Frame = -2

Query: 571 LQNVGFDVFAQ--IDIEKSDRQLVEAIVERWWDSTHTFHFPCGEIGFTPLDFSMLTGLRV 398
           + N GF  F        ++++  V ++ ERWWD+T T HFP GE+G TP DFS++TGLR+
Sbjct: 79  VDNAGFGRFISSLCPSSRAEKVRVISLAERWWDTTGTLHFPFGEVGMTPYDFSVITGLRI 138

Query: 397 GEGKIVAFDS-KYELFDEAVKYLPFLTEDEIYSGSIKLSHLEMYTTYAVQDDINEREIGF 221
           G GK + +++  +   D+ +K L   +   +  GS+  S L       V +   +RE   
Sbjct: 139 G-GKPIPYNAGVHRSEDDLLKALG--SRPPVIRGSVSCSWLFENFHNVVCNTDRDRECHT 195

Query: 220 RAFMLYVIGNVLLANSHSKVRLGYLASLIQIDEIGSYDWGGAAYTHLIMSLDLVCR 53
           RAF+LY+ G  +      KV L  L +L  +D IG YDWGGAAY  L   ++ V R
Sbjct: 196 RAFILYLFGCTMFGTLDCKVNLNSLPALEDVDRIGEYDWGGAAYAALCTHMNSVSR 251


>gb|AAM62582.1| unknown [Arabidopsis thaliana]
          Length = 478

 Score = 80.5 bits (197), Expect = 7e-13
 Identities = 51/168 (30%), Positives = 82/168 (48%), Gaps = 3/168 (1%)
 Frame = -2

Query: 574 MLQNVGFDVFAQIDIEKSDRQLVEAIVERWWDSTHTFHFPCGEIGFTPLDFSMLTGLRVG 395
           +++  GF  F  I     +  L+ A+VERW   T+TFHFPCGE+  T  + S++ GL V 
Sbjct: 45  LVEKAGFGWFRLIGSISLNNSLISALVERWRRETNTFHFPCGEMTITLDEVSLILGLAVD 104

Query: 394 EGKIVAFDSKYELFDE-AVKYLPFLTEDEIYSGSIKLSHL-EMYTTYAVQDDINEREIGF 221
              +V    K E   +  +K L  L + E+    +    L E +        + E E   
Sbjct: 105 GKPVVGVKEKDEDPSQVCLKLLGKLPKGELSGNRVTAKWLKESFAECPKGATMKEIEYHT 164

Query: 220 RAFMLYVIGNVLLANSH-SKVRLGYLASLIQIDEIGSYDWGGAAYTHL 80
           RA+++Y++G+ + A +  SK+ + YL      ++ G Y WG AA   L
Sbjct: 165 RAYLIYIVGSTIFATTDPSKISVDYLILFEDFEKAGEYAWGAAALAFL 212


>ref|XP_002302840.1| predicted protein [Populus trichocarpa] gi|222844566|gb|EEE82113.1|
           predicted protein [Populus trichocarpa]
          Length = 416

 Score = 80.1 bits (196), Expect = 1e-12
 Identities = 56/177 (31%), Positives = 89/177 (50%), Gaps = 4/177 (2%)
 Frame = -2

Query: 574 MLQNVGFDVFAQIDIEKSDRQLVEAIVERWWDSTHTFHFPCGEIGFTPLDFSMLTGLRVG 395
           +++  GF    +I     D  L+ A+VERW   T+TFHF  GE+  T  D ++L GL + 
Sbjct: 43  LVEKAGFGYLRKIPAISLDNPLISALVERWRRETNTFHFTVGEMTVTLQDVALLLGLAI- 101

Query: 394 EGKIVAFDSKYELFDEAVKYLPFLTEDEIYS--GSIKLSHLEMYTTYAVQD-DINEREIG 224
           +GK V     +       + L     D  Y+  G +KLS L+ + ++  +D  I E E  
Sbjct: 102 DGKPV-IGITHTTCASVCEGLLGKAPDSSYASGGMVKLSWLKEFFSHCSEDAPIEEVEHC 160

Query: 223 FRAFMLYVIGNVLLA-NSHSKVRLGYLASLIQIDEIGSYDWGGAAYTHLIMSLDLVC 56
            RA++LY++G+ + +  + +KV + YL      +E G Y WG AA   L  +L   C
Sbjct: 161 TRAYLLYLVGSTIFSTTTGNKVPVMYLPLFAYFEEAGEYAWGAAALAFLYRALGNAC 217


>ref|NP_564042.1| Aminotransferase-like, plant mobile domain family protein
           [Arabidopsis thaliana]
           gi|9665070|gb|AAF97272.1|AC034106_15 Contains similarity
           to a hypothetical protein At2g25010 gi|4559351 from
           Arabidopsis thaliana chromosome II gb|AC006585
           [Arabidopsis thaliana] gi|62320302|dbj|BAD94623.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332191532|gb|AEE29653.1| Aminotransferase-like, plant
           mobile domain family protein [Arabidopsis thaliana]
          Length = 478

 Score = 79.0 bits (193), Expect = 2e-12
 Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 3/168 (1%)
 Frame = -2

Query: 574 MLQNVGFDVFAQIDIEKSDRQLVEAIVERWWDSTHTFHFPCGEIGFTPLDFSMLTGLRVG 395
           +++  GF  F  +     +  L+ A+VERW   T+TFHFPCGE+  T  + S++ GL V 
Sbjct: 45  LVEKAGFGWFRLVGSISLNNSLISALVERWRRETNTFHFPCGEMTITLDEVSLILGLAVD 104

Query: 394 EGKIVAFDSKYELFDE-AVKYLPFLTEDEIYSGSIKLSHL-EMYTTYAVQDDINEREIGF 221
              +V    K E   +  ++ L  L + E+    +    L E +        + E E   
Sbjct: 105 GKPVVGVKEKDEDPSQVCLRLLGKLPKGELSGNRVTAKWLKESFAECPKGATMKEIEYHT 164

Query: 220 RAFMLYVIGNVLLANSH-SKVRLGYLASLIQIDEIGSYDWGGAAYTHL 80
           RA+++Y++G+ + A +  SK+ + YL      ++ G Y WG AA   L
Sbjct: 165 RAYLIYIVGSTIFATTDPSKISVDYLILFEDFEKAGEYAWGAAALAFL 212


>ref|XP_004143807.1| PREDICTED: serine/threonine-protein phosphatase 7 long form homolog
           [Cucumis sativus]
          Length = 486

 Score = 77.8 bits (190), Expect = 5e-12
 Identities = 52/172 (30%), Positives = 85/172 (49%), Gaps = 3/172 (1%)
 Frame = -2

Query: 574 MLQNVGFDVFAQIDIEKSDRQLVEAIVERWWDSTHTFHFPCGEIGFTPLDFSMLTGLRVG 395
           +++  GF     +     D  L+ A+VERW   T+TFHF  GE+  T  D ++L GL + 
Sbjct: 56  LVEKAGFGYLRLMPAVTLDCALISALVERWRKETNTFHFSVGEMTITLEDVALLLGLSID 115

Query: 394 EGKIVAFD-SKYELFDEAVKYLPFLTEDEIYSGSIKLSHL-EMYTTYAVQDDINEREIGF 221
              +   D     L +  +   P       + G++KL+ L E+++       I + E   
Sbjct: 116 GKPVTDVDVDPKSLCENLLGKAP-----TDFKGAVKLTWLKEVFSECPEDAGIEQIEYST 170

Query: 220 RAFMLYVIGNVLLAN-SHSKVRLGYLASLIQIDEIGSYDWGGAAYTHLIMSL 68
           RA++LY++G+ + A+ S +KV + YL+     DE G Y WG AA   L  +L
Sbjct: 171 RAYLLYLLGSTIFASTSGNKVSVMYLSLFKDFDEAGKYAWGAAALAFLYRAL 222


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