BLASTX nr result

ID: Coptis23_contig00014328 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014328
         (881 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003535433.1| PREDICTED: cell number regulator 10-like [Gl...   103   4e-20
ref|XP_003590818.1| PGPS/D12 [Medicago truncatula] gi|355479866|...   103   5e-20
ref|XP_003575228.1| PREDICTED: cell number regulator 2-like [Bra...    85   2e-14
dbj|BAK01385.1| predicted protein [Hordeum vulgare subsp. vulgare]     81   3e-13
dbj|BAK04959.1| predicted protein [Hordeum vulgare subsp. vulgare]     81   3e-13

>ref|XP_003535433.1| PREDICTED: cell number regulator 10-like [Glycine max]
          Length = 136

 Score =  103 bits (258), Expect = 4e-20
 Identities = 45/77 (58%), Positives = 53/77 (68%)
 Frame = +2

Query: 44  TTCSSHAVMYGLLMLCQCHCLYGAVYCGKLQMKFNLPAEPCGDCCVHWCCGNCALCQEHA 223
           ++C      YGLLML  CH LY  +Y  KL+ KF LPAEPC DCCV++CC  CALCQEHA
Sbjct: 48  SSCFGQGCAYGLLMLVTCHWLYSCLYREKLRSKFGLPAEPCCDCCVNFCCEACALCQEHA 107

Query: 224 EVTFRGIDPSKGLVSSP 274
           E+  RG DPSKG +  P
Sbjct: 108 ELKARGFDPSKGWIGPP 124


>ref|XP_003590818.1| PGPS/D12 [Medicago truncatula] gi|355479866|gb|AES61069.1| PGPS/D12
           [Medicago truncatula]
          Length = 137

 Score =  103 bits (257), Expect = 5e-20
 Identities = 43/77 (55%), Positives = 54/77 (70%)
 Frame = +2

Query: 44  TTCSSHAVMYGLLMLCQCHCLYGAVYCGKLQMKFNLPAEPCGDCCVHWCCGNCALCQEHA 223
           ++C+    +YGLLM   CH LY  +Y  KL+ K+ LPAEPC DCCVH+CC  CALCQEHA
Sbjct: 49  SSCAMQGCVYGLLMTITCHWLYSCLYREKLRAKYGLPAEPCCDCCVHFCCDACALCQEHA 108

Query: 224 EVTFRGIDPSKGLVSSP 274
           E+  RG +PSKG +  P
Sbjct: 109 ELKARGFNPSKGWIGPP 125


>ref|XP_003575228.1| PREDICTED: cell number regulator 2-like [Brachypodium distachyon]
          Length = 187

 Score = 85.1 bits (209), Expect = 2e-14
 Identities = 33/73 (45%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
 Frame = +2

Query: 44  TTCSSHAVMYGLLMLCQ-CHCLYGAVYCGKLQMKFNLPAEPCGDCCVHWCCGNCALCQEH 220
           ++C S   +Y L+ML   CHC+Y   Y  K++ ++ L   PC DCC+HWCC  CALCQE+
Sbjct: 90  SSCGSSGALYALIMLLTGCHCVYSCFYRAKMRAQYGLQERPCADCCIHWCCEPCALCQEY 149

Query: 221 AEVTFRGIDPSKG 259
            E+  RG D + G
Sbjct: 150 RELKKRGFDMNLG 162


>dbj|BAK01385.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 187

 Score = 81.3 bits (199), Expect = 3e-13
 Identities = 32/73 (43%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
 Frame = +2

Query: 44  TTCSSHAVMYGLLM-LCQCHCLYGAVYCGKLQMKFNLPAEPCGDCCVHWCCGNCALCQEH 220
           T+C +   +Y L+M L  C C+Y   Y  K++  + L   PC DCC+HWCC  CALCQE+
Sbjct: 90  TSCGASGALYALIMCLTGCQCVYSCFYRAKMRAHYGLQESPCADCCIHWCCEPCALCQEY 149

Query: 221 AEVTFRGIDPSKG 259
            E+  RG D + G
Sbjct: 150 RELKKRGFDMNLG 162


>dbj|BAK04959.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 246

 Score = 81.3 bits (199), Expect = 3e-13
 Identities = 32/73 (43%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
 Frame = +2

Query: 44  TTCSSHAVMYGLLM-LCQCHCLYGAVYCGKLQMKFNLPAEPCGDCCVHWCCGNCALCQEH 220
           T+C +   +Y L+M L  C C+Y   Y  K++  + L   PC DCC+HWCC  CALCQE+
Sbjct: 149 TSCGASGALYALIMCLTGCQCVYSCFYRAKMRAHYGLQESPCADCCIHWCCEPCALCQEY 208

Query: 221 AEVTFRGIDPSKG 259
            E+  RG D + G
Sbjct: 209 RELKKRGFDMNLG 221


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