BLASTX nr result

ID: Coptis23_contig00014310 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014310
         (334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320504.1| predicted protein [Populus trichocarpa] gi|2...    61   1e-07
ref|XP_002301587.1| predicted protein [Populus trichocarpa] gi|1...    59   4e-07
ref|XP_003549543.1| PREDICTED: uncharacterized protein LOC100785...    57   2e-06
ref|XP_003529667.1| PREDICTED: uncharacterized protein LOC100791...    57   2e-06
ref|XP_004162878.1| PREDICTED: uncharacterized LOC101211761 [Cuc...    56   3e-06

>ref|XP_002320504.1| predicted protein [Populus trichocarpa] gi|222861277|gb|EEE98819.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 29/56 (51%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
 Frame = -3

Query: 170 SVLLFVCLILTTLVLSTNAQTCRNNTFT-NRFFASCNDLPVLNSSLYWTYIPSNRT 6
           + LLF C +L +L + + AQTC N TF+ NR +++CNDLP L+ SL+W Y PSN T
Sbjct: 6   TTLLFSCALLISLCVPSLAQTCGNYTFSGNRSYSTCNDLPQLSCSLHWNYHPSNLT 61


>ref|XP_002301587.1| predicted protein [Populus trichocarpa] gi|118486648|gb|ABK95161.1|
           unknown [Populus trichocarpa]
           gi|222843313|gb|EEE80860.1| predicted protein [Populus
           trichocarpa]
          Length = 394

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 28/56 (50%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
 Frame = -3

Query: 170 SVLLFVCLILTTLVLSTNAQTCRNNTFTN-RFFASCNDLPVLNSSLYWTYIPSNRT 6
           + LLF C +L +L +S+ AQ+C N +F+N + +++CNDL  LN SL+WTY PSN T
Sbjct: 7   TTLLFSCFLLISLPVSSLAQSCGNYSFSNSQEYSACNDLSQLNCSLHWTYHPSNMT 62


>ref|XP_003549543.1| PREDICTED: uncharacterized protein LOC100785371 [Glycine max]
          Length = 400

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 22/41 (53%), Positives = 34/41 (82%)
 Frame = -3

Query: 146 ILTTLVLSTNAQTCRNNTFTNRFFASCNDLPVLNSSLYWTY 24
           +L+ ++++++AQTCRN TF+NR FA+C DLP L + L+WTY
Sbjct: 14  VLSCVLVTSSAQTCRNQTFSNRVFATCRDLPQLTAYLHWTY 54


>ref|XP_003529667.1| PREDICTED: uncharacterized protein LOC100791878 [Glycine max]
          Length = 402

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 22/41 (53%), Positives = 34/41 (82%)
 Frame = -3

Query: 146 ILTTLVLSTNAQTCRNNTFTNRFFASCNDLPVLNSSLYWTY 24
           +L+ ++++++AQTCRN TF+NR FA+C DLP L + L+WTY
Sbjct: 16  VLSCVLVTSSAQTCRNQTFSNRVFATCRDLPQLTAYLHWTY 56


>ref|XP_004162878.1| PREDICTED: uncharacterized LOC101211761 [Cucumis sativus]
          Length = 396

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 32/54 (59%), Positives = 38/54 (70%), Gaps = 2/54 (3%)
 Frame = -3

Query: 158 FVCLILTTLVLSTNAQTCRN-NTFTNR-FFASCNDLPVLNSSLYWTYIPSNRTV 3
           F  LIL +L LS +AQTCR+ N FTN   FA+C D PVLNS L+WT I SN T+
Sbjct: 9   FSVLILFSLCLSASAQTCRSYNGFTNNEVFAACVDHPVLNSFLHWTLIQSNNTL 62