BLASTX nr result

ID: Coptis23_contig00014308 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014308
         (373 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275676.1| PREDICTED: uncharacterized protein LOC100267...    62   4e-16
ref|XP_004146493.1| PREDICTED: uncharacterized protein LOC101203...    56   1e-14
ref|NP_199752.1| uncharacterized protein [Arabidopsis thaliana] ...    55   2e-14
ref|XP_002863981.1| hypothetical protein ARALYDRAFT_357185 [Arab...    55   2e-14
gb|AAM65960.1| unknown [Arabidopsis thaliana]                          55   2e-14

>ref|XP_002275676.1| PREDICTED: uncharacterized protein LOC100267751 [Vitis vinifera]
           gi|297735090|emb|CBI17452.3| unnamed protein product
           [Vitis vinifera]
          Length = 121

 Score = 62.4 bits (150), Expect(2) = 4e-16
 Identities = 30/56 (53%), Positives = 37/56 (66%)
 Frame = -3

Query: 323 MFATAVXXXXXXXXXXXXXXXXXXXPEQTQTISRVIFDVVKEHGPLTIADTWEHIK 156
           MFATA+                   PEQT+T++RVIFD+VKEHGPLTIADTWEH++
Sbjct: 1   MFATAIRYLAKKPKPKQKPIELKTPPEQTKTLTRVIFDIVKEHGPLTIADTWEHVQ 56



 Score = 47.0 bits (110), Expect(2) = 4e-16
 Identities = 20/25 (80%), Positives = 23/25 (92%)
 Frame = -1

Query: 76  KRLQDVGLRGLTSKRHMKIILRWMR 2
           + +Q VGLRGLTSKRHMKI+LRWMR
Sbjct: 53  EHVQQVGLRGLTSKRHMKIVLRWMR 77


>ref|XP_004146493.1| PREDICTED: uncharacterized protein LOC101203168 [Cucumis sativus]
           gi|449521243|ref|XP_004167639.1| PREDICTED:
           uncharacterized protein LOC101228732 [Cucumis sativus]
          Length = 122

 Score = 56.2 bits (134), Expect(2) = 1e-14
 Identities = 28/56 (50%), Positives = 34/56 (60%)
 Frame = -3

Query: 323 MFATAVXXXXXXXXXXXXXXXXXXXPEQTQTISRVIFDVVKEHGPLTIADTWEHIK 156
           MF TAV                   PEQTQTI+R IFD+VKEHGPLTIA+TW+ ++
Sbjct: 1   MFGTAVRCFATKPKPKMKPIELKTPPEQTQTITRAIFDIVKEHGPLTIAETWDRVQ 56



 Score = 48.5 bits (114), Expect(2) = 1e-14
 Identities = 20/24 (83%), Positives = 24/24 (100%)
 Frame = -1

Query: 73  RLQDVGLRGLTSKRHMKIILRWMR 2
           R+Q+VGLRGLTSKRHMKI++RWMR
Sbjct: 54  RVQEVGLRGLTSKRHMKIVMRWMR 77


>ref|NP_199752.1| uncharacterized protein [Arabidopsis thaliana]
           gi|79330414|ref|NP_001032044.1| uncharacterized protein
           [Arabidopsis thaliana] gi|9759424|dbj|BAB09911.1|
           unnamed protein product [Arabidopsis thaliana]
           gi|51970274|dbj|BAD43829.1| unknown protein [Arabidopsis
           thaliana] gi|98960881|gb|ABF58924.1| At5g49410
           [Arabidopsis thaliana] gi|332008424|gb|AED95807.1|
           uncharacterized protein [Arabidopsis thaliana]
           gi|332008425|gb|AED95808.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 145

 Score = 55.5 bits (132), Expect(2) = 2e-14
 Identities = 22/30 (73%), Positives = 29/30 (96%)
 Frame = -3

Query: 245 EQTQTISRVIFDVVKEHGPLTIADTWEHIK 156
           EQTQTI+RVIFD++K+HGPLTIA+TW+ +K
Sbjct: 42  EQTQTITRVIFDILKDHGPLTIAETWDRVK 71



 Score = 48.1 bits (113), Expect(2) = 2e-14
 Identities = 21/24 (87%), Positives = 24/24 (100%)
 Frame = -1

Query: 73  RLQDVGLRGLTSKRHMKIILRWMR 2
           R+++VGLRGLTSKRHMKIILRWMR
Sbjct: 69  RVKEVGLRGLTSKRHMKIILRWMR 92


>ref|XP_002863981.1| hypothetical protein ARALYDRAFT_357185 [Arabidopsis lyrata subsp.
           lyrata] gi|297309816|gb|EFH40240.1| hypothetical protein
           ARALYDRAFT_357185 [Arabidopsis lyrata subsp. lyrata]
          Length = 143

 Score = 55.5 bits (132), Expect(2) = 2e-14
 Identities = 22/30 (73%), Positives = 29/30 (96%)
 Frame = -3

Query: 245 EQTQTISRVIFDVVKEHGPLTIADTWEHIK 156
           EQTQTI+RVIFD++K+HGPLTIA+TW+ +K
Sbjct: 42  EQTQTITRVIFDILKDHGPLTIAETWDRVK 71



 Score = 48.1 bits (113), Expect(2) = 2e-14
 Identities = 21/24 (87%), Positives = 24/24 (100%)
 Frame = -1

Query: 73  RLQDVGLRGLTSKRHMKIILRWMR 2
           R+++VGLRGLTSKRHMKIILRWMR
Sbjct: 69  RVKEVGLRGLTSKRHMKIILRWMR 92


>gb|AAM65960.1| unknown [Arabidopsis thaliana]
          Length = 139

 Score = 55.5 bits (132), Expect(2) = 2e-14
 Identities = 22/30 (73%), Positives = 29/30 (96%)
 Frame = -3

Query: 245 EQTQTISRVIFDVVKEHGPLTIADTWEHIK 156
           EQTQTI+RVIFD++K+HGPLTIA+TW+ +K
Sbjct: 36  EQTQTITRVIFDILKDHGPLTIAETWDRVK 65



 Score = 48.1 bits (113), Expect(2) = 2e-14
 Identities = 21/24 (87%), Positives = 24/24 (100%)
 Frame = -1

Query: 73  RLQDVGLRGLTSKRHMKIILRWMR 2
           R+++VGLRGLTSKRHMKIILRWMR
Sbjct: 63  RVKEVGLRGLTSKRHMKIILRWMR 86


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