BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014303
         (1115 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534512.1| conserved hypothetical protein [Ricinus comm...   101   3e-19
ref|XP_002517454.1| conserved hypothetical protein [Ricinus comm...   101   4e-19
ref|XP_002870349.1| hypothetical protein ARALYDRAFT_915515 [Arab...    98   4e-18
ref|XP_002882457.1| F-box family protein [Arabidopsis lyrata sub...    88   3e-15
emb|CAN83390.1| hypothetical protein VITISV_041404 [Vitis vinifera]    88   3e-15

>ref|XP_002534512.1| conserved hypothetical protein [Ricinus communis]
            gi|223525141|gb|EEF27869.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 383

 Score =  101 bits (252), Expect = 3e-19
 Identities = 77/249 (30%), Positives = 120/249 (48%), Gaps = 18/249 (7%)
 Frame = -2

Query: 1102 SLPENPFYVFNPITGECIELPHLEVLDGEEIKKSEKSAVCSSGFGFDESKQEFKVVLVMF 923
            SL +N FY++NP T  C+ELP         I           GFGFD  ++++KV+ V +
Sbjct: 119  SLHKNTFYMYNPFTNSCMELP---------ISNFPSDVWTVLGFGFDPVRKKYKVLKVSY 169

Query: 922  TQCESDTP------AVDSEVIIYTLGSPSWRKKTCNAPGLFRSCEIVSVYFHGCLHWLIL 761
             +  ++T       ++ SEV I T+GSPSWR  +      +       VY +G LHW+  
Sbjct: 170  IRRTNNTAGERYGLSLRSEVQILTVGSPSWR--SLGETPYYPIHSPSQVYVNGRLHWVNW 227

Query: 760  DENSRRYGPLIVSFDLGVEEFGTVPTPGSKMFKHSFQYYSIGVLEGNLASVEFSPETYIH 581
                R  G  ++SFDL  E+F  VP PGS   K  +  Y + V+   L++  +       
Sbjct: 228  PVRYRP-GRKLISFDLEDEKFREVPLPGSDGIK--WGDYMLVVIRDCLSAAVYRNYGSFE 284

Query: 580  VWVMKRYKVKKSWVRQFS------------IEHNSVCRQGLRCRYIELVKLTKKGELLFL 437
            VWVMK Y +K+SW+++FS            I+ +    +  R  +  ++ + K GE+L  
Sbjct: 285  VWVMKDYGLKESWIKEFSIGVYLPKGLEQKIDPSFRVSKFYRRAFTRILCVLKNGEILLE 344

Query: 436  CNCQYLVSY 410
               + LVSY
Sbjct: 345  YGRRALVSY 353


>ref|XP_002517454.1| conserved hypothetical protein [Ricinus communis]
            gi|223543465|gb|EEF44996.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 401

 Score =  101 bits (251), Expect = 4e-19
 Identities = 87/291 (29%), Positives = 132/291 (45%), Gaps = 21/291 (7%)
 Frame = -2

Query: 1093 ENPFYVFNPITGECIELPHLEVLDGEEIKKSEKSAVCS--SGFGFDESKQEFKVV-LVMF 923
            ++P Y++NP T EC ELP +E         S  S +C    GFGF    +E+KV+ +V +
Sbjct: 129  DDPLYIYNPFTIECRELPRVEA--------SPHSVICRVVFGFGFHPKMEEYKVIKIVYY 180

Query: 922  TQCESDTPAVDSEVIIYTLGSPSWRK-----KTCNAPGLFRSCEIVSVYFHGCLHWLILD 758
             Q  +D      E  + T  +P+WR         N P    S  +V+   H     L+ +
Sbjct: 181  KQGNNDFSGGAPEAFVLTANTPTWRNIGKIGYDLNGP---TSEALVNEKLHWLTFCLVHE 237

Query: 757  ENSRRYGPLIVSFDLGVEEFGTVPTPGSKMFKHSFQYYSIGVLEGNLASVEFSPETYIHV 578
            E   R    IVSFDL  E+F  VP PG          Y +  L G L+++    E    +
Sbjct: 238  EVKYRE---IVSFDLETEQFQDVPRPGCGGLDQI--NYHLVTLRGCLSAIVSCNEGSNEI 292

Query: 577  WVMKRYKVKKSWVRQFSIEH--------NSV-----CRQGLRCRYIELVKLTKKGELLFL 437
            W+MK Y VK SW ++  + +        N+V      + G + R   ++   K GELL L
Sbjct: 293  WMMKIYNVKASWRKEMIVRNYVPQGLRLNTVPPARRRKNGYQGRRFRVLCDLKNGELLLL 352

Query: 436  CNCQYLVSYNITGKWCRFLRVEGVKKVKDGSKLLAHPLVGSLISLKSAYGV 284
              C+ +VSYN      + L  +G+       + LA    GSLIS+ + +G+
Sbjct: 353  YGCRCIVSYNPETGEFKELNFQGLP-----LEFLAFVHSGSLISVNTVFGM 398


>ref|XP_002870349.1| hypothetical protein ARALYDRAFT_915515 [Arabidopsis lyrata subsp.
            lyrata] gi|297316185|gb|EFH46608.1| hypothetical protein
            ARALYDRAFT_915515 [Arabidopsis lyrata subsp. lyrata]
          Length = 405

 Score = 97.8 bits (242), Expect = 4e-18
 Identities = 74/267 (27%), Positives = 125/267 (46%), Gaps = 2/267 (0%)
 Frame = -2

Query: 1090 NPFYVFNPITGECIELPHLEVLDGEEIKKSEKSAVCSSGFGFDESKQEFKVVLVMFTQCE 911
            N  +++NP TGE  +LP L     E ++      + S GFGFD    +FKVV  +     
Sbjct: 163  NDVFLYNPTTGESKKLPDLP----ESLRSKSTKTLFSYGFGFDSLNNDFKVVKFID---- 214

Query: 910  SDTPAVDSEVIIYTLGSPSWRKKTCNAPGLFRS-CEIVSVYFHGCLHWLILDENSRRYGP 734
                   ++  +Y+L + SWR+  CN P  ++  C   SV  +G +HW+ +         
Sbjct: 215  ------GNDNYVYSLKTDSWRR-ICNMP--YKDVCFFTSVELNGAIHWISIPRRGETSQK 265

Query: 733  LIVSFDLGVEEFGTVPTPG-SKMFKHSFQYYSIGVLEGNLASVEFSPETYIHVWVMKRYK 557
            ++ +FDL  E+F  +  P  ++  +H +    +G+L+G L  V F  + +  +WVM  Y 
Sbjct: 266  VVTAFDLTTEKFRVMSLPDLAEECEHIYPKSKVGILKGRLCVVYFCMKIHDVIWVMNEYG 325

Query: 556  VKKSWVRQFSIEHNSVCRQGLRCRYIELVKLTKKGELLFLCNCQYLVSYNITGKWCRFLR 377
            ++ SW         S  R     ++++ +  T+  E + L    +LV YN      + L+
Sbjct: 326  LESSW---------SKIRISRSYKHMKPLCSTENNEEVLLVLDGHLVLYNFERNTRKNLK 376

Query: 376  VEGVKKVKDGSKLLAHPLVGSLISLKS 296
            + GV+  K    LL +  V SLIS  S
Sbjct: 377  IRGVEFDK---SLLGNTYVESLISPNS 400


>ref|XP_002882457.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297328297|gb|EFH58716.1| F-box family protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 427

 Score = 88.2 bits (217), Expect = 3e-15
 Identities = 83/276 (30%), Positives = 133/276 (48%), Gaps = 6/276 (2%)
 Frame = -2

Query: 1093 ENPFYVFNPITGECIELPHLEVLDGEEIKKSEKSAVCSSGFGFDESKQEFKVVLVMFTQC 914
            E    ++NP TG+   LP  E L  + ++    +   + GFGFD+   ++KVV ++ T  
Sbjct: 179  EGAVILYNPTTGDSKRLP--ETLRPKSVEYGRDNFQ-TYGFGFDDLTDDYKVVKLVATSD 235

Query: 913  ESDTPAVDSEVIIYTLGSPSWRKKTCNA-----PGLFRSCEIVSVYFHGCLHWLILDENS 749
            +     +D+ V  Y+L + SWR+  CN       G + S     V+F+G +HW+  + + 
Sbjct: 236  D----ILDASV--YSLKADSWRR-ICNLNYEHNDGFYTS----GVHFNGAIHWVFAEISH 284

Query: 748  RRYGPLIVSFDLGVEEFGTVPTP-GSKMFKHSFQYYSIGVLEGNLASVEFSPETYIHVWV 572
             +   ++V+FD+  EEF  +P P  ++   H F  + +G L G L  V    E +  +WV
Sbjct: 285  GQR--VVVAFDIQTEEFREMPLPVEAEDCHHRFSNFVVGSLNGRLCVVNSCYEVHDDIWV 342

Query: 571  MKRYKVKKSWVRQFSIEHNSVCRQGLRCRYIELVKLTKKGELLFLCNCQYLVSYNITGKW 392
            M  Y   KSW R          R  L  R ++ +  TKK E + L     +V YN     
Sbjct: 343  MSEYGEVKSWSR---------IRINLLYRSMKPLCSTKKDEEVLLELDGDMVLYNFETNA 393

Query: 391  CRFLRVEGVKKVKDGSKLLAHPLVGSLISLKSAYGV 284
               L + GV K+ DG +  A+  V SLIS  ++YG+
Sbjct: 394  SSNLGIRGV-KLSDGFE--ANTYVESLIS-PNSYGI 425


>emb|CAN83390.1| hypothetical protein VITISV_041404 [Vitis vinifera]
          Length = 322

 Score = 88.2 bits (217), Expect = 3e-15
 Identities = 80/272 (29%), Positives = 129/272 (47%), Gaps = 5/272 (1%)
 Frame = -2

Query: 1093 ENPFYVFNPITGECIELPHLEVLDGEEIKKSEKSAVCSSGFGFDESKQEFKVVLVMFTQC 914
            E    V NP+ GE + LP   V+       S    +   G GFD S +++K+V V F   
Sbjct: 68   EEEALVSNPLRGELLMLPESTVM-------SRWPHLDRYGLGFDSSIKKYKIVHVFFRDF 120

Query: 913  ESDTPAVDSEVIIYTLGSPSWRKKTCNAP--GLFRSCEIVSVYFHGCLHWLILDE-NSRR 743
            +           +YT+G+ S  ++    P   L++     +VY  G LHWL+  E N   
Sbjct: 121  DWAKRGYRLGAEVYTVGTTSSWREISQIPCYPLYKR----AVYASGALHWLVNYEFNPDN 176

Query: 742  YGPLIVSFDLGVEEFGTVPTPG--SKMFKHSFQYYSIGVLEGNLASVEFSPETYIHVWVM 569
               +++SF++  EEF ++P     SK+ K    ++ +  L G L  V+FS  T+I +W +
Sbjct: 177  LKSMVISFNIKDEEFNSIPHQEFPSKVSK----WFELVDLRGYLGMVDFSLGTHIEIWKL 232

Query: 568  KRYKVKKSWVRQFSIEHNSVCRQGLRCRYIELVKLTKKGELLFLCNCQYLVSYNITGKWC 389
            K Y+ KK WVR++ I+        +  +YIE+V L   GE+L L   + LV+YN      
Sbjct: 233  KDYE-KKEWVREYRIDIKPPHGVSI-SQYIEVVGLMGDGEIL-LERYKKLVAYNPKTNGL 289

Query: 388  RFLRVEGVKKVKDGSKLLAHPLVGSLISLKSA 293
            R  R++ +    D      +    SL+S+  A
Sbjct: 290  R--RIQTLNNDPDMDXPQVYVYTASLVSISGA 319