BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014300
         (847 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN08954.1| Ribonuclease H [Medicago truncatula]                    86   1e-14
ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medica...    74   5e-14
ref|XP_002314708.1| predicted protein [Populus trichocarpa] gi|2...    76   8e-12
ref|XP_002309989.1| predicted protein [Populus trichocarpa] gi|2...    76   8e-12
ref|XP_003605652.1| GDSL esterase/lipase [Medicago truncatula] g...    75   2e-11

>gb|ABN08954.1| Ribonuclease H [Medicago truncatula]
          Length = 175

 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 52/141 (36%), Positives = 76/141 (53%), Gaps = 3/141 (2%)
 Frame = +2

Query: 353 IKINVDGSSRGNPGRAGWGVILRDDMGNFLGASAGGLGVCTNYMAETYAIIEGILRALDR 532
           +KIN+DGS+ G P     G + R+   + LG  A  +G  T + AE  A I  I ++++ 
Sbjct: 11  VKINLDGSAFGAPSCGATGGVFRNWQTHSLGGFAQNIGHATCFKAELCAAIFAIEKSIEY 70

Query: 533 DWRYIWVESDSASVVKAF-QEDTVHWRVRTKWMQLKEKASWINVTAT--WRETNKGVDSC 703
           + R IW+E+DS  VVKAF   + V W++RT+W      A  I    T   RE N G DS 
Sbjct: 71  NLRDIWLETDSKLVVKAFSSSEHVPWQLRTRWNNCLALAQKIKCVCTHIHREGNAGADSL 130

Query: 704 ARHEAALQNGESKWWDNKPPF 766
           A++  +L    S+WW + P F
Sbjct: 131 AKNGKSLALLTSQWWSSSPLF 151


>ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medicago truncatula]
           gi|355496705|gb|AES77908.1| Cytochrome c biogenesis
           protein ccsA [Medicago truncatula]
          Length = 666

 Score = 73.6 bits (179), Expect(2) = 5e-14
 Identities = 45/143 (31%), Positives = 73/143 (51%), Gaps = 3/143 (2%)
 Frame = +2

Query: 350 IIKINVDGSSRGNPGRAGWGVILRDDMGNFLGASAGGLGVCTNYMAETYAIIEGILRALD 529
           I+KIN DGSS G       G+++RD   +FLGA +  +G  T   AE  A +  + +A +
Sbjct: 223 IVKINCDGSSVGRHPCGSIGIVIRDSNHHFLGAISSNIGNATPLEAEFCAGMMAMEKAQE 282

Query: 530 RDWRYIWVESDSASVVKAFQEDT-VHWRVRTKWMQLKEKASWINVTAT--WRETNKGVDS 700
               ++ +E+DS  VV AF +   V W++R +W    +    I+ +     RE N   D+
Sbjct: 283 MQLMHVCLETDSLKVVNAFNKGLGVPWQMRARWQNCWDFCDSISCSCVHILREGNMVADA 342

Query: 701 CARHEAALQNGESKWWDNKPPFV 769
            A+H   L    ++ W + PPF+
Sbjct: 343 LAKHGQGLSLYYTQLWTSPPPFI 365



 Score = 30.4 bits (67), Expect(2) = 5e-14
 Identities = 18/117 (15%), Positives = 50/117 (42%), Gaps = 1/117 (0%)
 Frame = +3

Query: 6   YHCELAKRVWDH-ARNIFSITSHIESFNDIMQQAKHHSSLILDMWKACSLTSMVSLWKNR 182
           + C +  R+WD   +    +         +++     S L+ ++  +  + ++ S+W  R
Sbjct: 93  FECHVTSRLWDWLGKGTDKLLDCSSCLQLLIRNWGSGSKLVNNILNSAIIHTIWSIWIER 152

Query: 183 NQVLYDQKNSSFSNICFLTRRVIIRAYQKSTGTMNNTVTDMKILHTQNLQHKLRRAS 353
           NQ  +  K+ + + +  +    +  ++       N+ + D K+    N+  K++R +
Sbjct: 153 NQRCFHNKHQAMTTLFNIILAEVKMSFSLCMIKGNSAMQDYKVAKLFNIPFKVKRVT 209


>ref|XP_002314708.1| predicted protein [Populus trichocarpa] gi|222863748|gb|EEF00879.1|
           predicted protein [Populus trichocarpa]
          Length = 245

 Score = 76.3 bits (186), Expect = 8e-12
 Identities = 43/113 (38%), Positives = 68/113 (60%), Gaps = 5/113 (4%)
 Frame = +2

Query: 278 YHEQHSDRYENSSHPKSPTQI-----EKSIIKINVDGSSRGNPGRAGWGVILRDDMGNFL 442
           + ++H +    SS  K  TQ+     ++  IK+NVDG S+GNPG AG G ++RD +G ++
Sbjct: 56  FTQRHGNDEGRSS--KEDTQVGWKYPQEERIKLNVDGCSKGNPGVAGAGGVIRDHLGAWI 113

Query: 443 GASAGGLGVCTNYMAETYAIIEGILRALDRDWRYIWVESDSASVVKAFQEDTV 601
           G  A  +G+C++  AE +A+  G+  A DR +R + +ESDS  VV     D+V
Sbjct: 114 GGFARNIGICSSVNAELWAVYVGLQLAWDRGFRKVDLESDSKVVVGLINGDSV 166


>ref|XP_002309989.1| predicted protein [Populus trichocarpa] gi|222852892|gb|EEE90439.1|
           predicted protein [Populus trichocarpa]
          Length = 245

 Score = 76.3 bits (186), Expect = 8e-12
 Identities = 43/113 (38%), Positives = 68/113 (60%), Gaps = 5/113 (4%)
 Frame = +2

Query: 278 YHEQHSDRYENSSHPKSPTQI-----EKSIIKINVDGSSRGNPGRAGWGVILRDDMGNFL 442
           + ++H +    SS  K  TQ+     ++  IK+NVDG S+GNPG AG G ++RD +G ++
Sbjct: 56  FTQRHGNDEGRSS--KEDTQVGWKYPQEERIKLNVDGCSKGNPGVAGAGGVIRDHLGAWI 113

Query: 443 GASAGGLGVCTNYMAETYAIIEGILRALDRDWRYIWVESDSASVVKAFQEDTV 601
           G  A  +G+C++  AE +A+  G+  A DR +R + +ESDS  VV     D+V
Sbjct: 114 GGFARNIGICSSVNAELWAVYVGLQLAWDRGFRKVDLESDSKVVVGLINGDSV 166


>ref|XP_003605652.1| GDSL esterase/lipase [Medicago truncatula]
           gi|355506707|gb|AES87849.1| GDSL esterase/lipase
           [Medicago truncatula]
          Length = 1004

 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 49/148 (33%), Positives = 72/148 (48%), Gaps = 3/148 (2%)
 Frame = +2

Query: 353 IKINVDGSSRGNPGRAGWGVILRDDMGNFLGASAGGLGVCTNYMAETYAIIEGILRALDR 532
           IK N DG+S       G   + RD   NFL   A  LG  + Y  E  AI+  +  A  R
Sbjct: 233 IKFNTDGASTATSSSCGG--VFRDQNANFLSCFAKNLGGGSAYQPELAAIMRVVEIAYQR 290

Query: 533 DWRYIWVESDSASVVKAFQE-DTVHWRVRTKWMQLKEKASWIN--VTATWRETNKGVDSC 703
           +WR IW+ESDSA VV AF++   +  R+R +W+  ++    +N  +T  +RE N+  D  
Sbjct: 291 NWRNIWIESDSALVVMAFKKMSMIPCRLRNRWINCRKLLCRMNFVITHIYREDNRCADKL 350

Query: 704 ARHEAALQNGESKWWDNKPPFVRDMENH 787
           A     ++      W N P F+ +   H
Sbjct: 351 ASKGLDIEG--VTIWLNMPDFINNFVIH 376