BLASTX nr result

ID: Coptis23_contig00014294 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014294
         (493 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300870.1| predicted protein [Populus trichocarpa] gi|1...   248   5e-64
ref|XP_002526648.1| Enoyl-CoA hydratase, mitochondrial precursor...   243   1e-62
ref|XP_002279162.2| PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase...   239   1e-61
emb|CBI22092.3| unnamed protein product [Vitis vinifera]              239   1e-61
tpg|DAA59558.1| TPA: hypothetical protein ZEAMMB73_070975 [Zea m...   238   4e-61

>ref|XP_002300870.1| predicted protein [Populus trichocarpa] gi|118483524|gb|ABK93660.1|
           unknown [Populus trichocarpa]
           gi|222842596|gb|EEE80143.1| predicted protein [Populus
           trichocarpa]
          Length = 391

 Score =  248 bits (632), Expect = 5e-64
 Identities = 122/163 (74%), Positives = 134/163 (82%)
 Frame = +3

Query: 3   YDGRNSYDSCLEVVYRMYWLCYHNHTYKKTQVALAHGIVIGGGASLMVPMKFSVVTEKTV 182
           YDGR S DSCLEVVYRMYWLC+H HTYKKTQVAL HGI +GGGASLMVPMKFSVVTEKTV
Sbjct: 78  YDGRTSKDSCLEVVYRMYWLCHHIHTYKKTQVALVHGISMGGGASLMVPMKFSVVTEKTV 137

Query: 183 FSMPEASIGFHTDCSFSYILSHLPGHMGEYLALTGARLNGKELVAAGLATHFVPSXXXXX 362
           FS PEASIGFHTDC FSYILS LPGH+GE+LALTGARLNGKELVAAG+ATHFVP      
Sbjct: 138 FSTPEASIGFHTDCGFSYILSRLPGHLGEFLALTGARLNGKELVAAGMATHFVPFEKLPE 197

Query: 363 XXXXXXXXXSGDVHAVKSVIQEFSSDVSLDDGSILRKQAIIDK 491
                    SGD +AVKSVI+EFS D+ LD+ S+L K +IID+
Sbjct: 198 LEKRLISLNSGDENAVKSVIEEFSVDIQLDEDSVLNKLSIIDE 240


>ref|XP_002526648.1| Enoyl-CoA hydratase, mitochondrial precursor, putative [Ricinus
           communis] gi|223534015|gb|EEF35736.1| Enoyl-CoA
           hydratase, mitochondrial precursor, putative [Ricinus
           communis]
          Length = 389

 Score =  243 bits (620), Expect = 1e-62
 Identities = 121/163 (74%), Positives = 134/163 (82%)
 Frame = +3

Query: 3   YDGRNSYDSCLEVVYRMYWLCYHNHTYKKTQVALAHGIVIGGGASLMVPMKFSVVTEKTV 182
           YDGR S DSCL+VVYRMYWLCYH HTYKKTQVAL +GI +GGGASLMVPMKFSVVTEKTV
Sbjct: 78  YDGRTSKDSCLDVVYRMYWLCYHIHTYKKTQVALVNGISMGGGASLMVPMKFSVVTEKTV 137

Query: 183 FSMPEASIGFHTDCSFSYILSHLPGHMGEYLALTGARLNGKELVAAGLATHFVPSXXXXX 362
           F+ PEASIGFHTDC FSY+LSHLPG++GE+LALTGARLNGKELVAAGLATHFVPS     
Sbjct: 138 FATPEASIGFHTDCGFSYMLSHLPGNLGEFLALTGARLNGKELVAAGLATHFVPSEKMPE 197

Query: 363 XXXXXXXXXSGDVHAVKSVIQEFSSDVSLDDGSILRKQAIIDK 491
                    SGD  AVKSV++EFS DV L+  SIL K +II+K
Sbjct: 198 LEKHLISLNSGDEKAVKSVLEEFSIDVQLEKESILNKLSIIEK 240


>ref|XP_002279162.2| PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase-like protein 5-like
           [Vitis vinifera]
          Length = 389

 Score =  239 bits (611), Expect = 1e-61
 Identities = 114/163 (69%), Positives = 132/163 (80%)
 Frame = +3

Query: 3   YDGRNSYDSCLEVVYRMYWLCYHNHTYKKTQVALAHGIVIGGGASLMVPMKFSVVTEKTV 182
           YDGR   DSCLEVVYRMYWLCYH H+YKKTQVAL HGI +GGGASLMVPMKFSVVTEKTV
Sbjct: 78  YDGREPRDSCLEVVYRMYWLCYHIHSYKKTQVALVHGISMGGGASLMVPMKFSVVTEKTV 137

Query: 183 FSMPEASIGFHTDCSFSYILSHLPGHMGEYLALTGARLNGKELVAAGLATHFVPSXXXXX 362
           F+ PEA+IGFHTDC FSY+LSHLPGH+GE++ALTGARLNGKELV  GLATH+VPS     
Sbjct: 138 FATPEATIGFHTDCGFSYMLSHLPGHLGEFIALTGARLNGKELVTVGLATHYVPSEKMPE 197

Query: 363 XXXXXXXXXSGDVHAVKSVIQEFSSDVSLDDGSILRKQAIIDK 491
                    SGD +A+KS I+EFS DV +D+ S+L KQ+ I++
Sbjct: 198 LEKRLMCLNSGDRNAIKSAIEEFSLDVKVDEDSVLNKQSTINE 240


>emb|CBI22092.3| unnamed protein product [Vitis vinifera]
          Length = 389

 Score =  239 bits (611), Expect = 1e-61
 Identities = 114/163 (69%), Positives = 132/163 (80%)
 Frame = +3

Query: 3   YDGRNSYDSCLEVVYRMYWLCYHNHTYKKTQVALAHGIVIGGGASLMVPMKFSVVTEKTV 182
           YDGR   DSCLEVVYRMYWLCYH H+YKKTQVAL HGI +GGGASLMVPMKFSVVTEKTV
Sbjct: 78  YDGREPRDSCLEVVYRMYWLCYHIHSYKKTQVALVHGISMGGGASLMVPMKFSVVTEKTV 137

Query: 183 FSMPEASIGFHTDCSFSYILSHLPGHMGEYLALTGARLNGKELVAAGLATHFVPSXXXXX 362
           F+ PEA+IGFHTDC FSY+LSHLPGH+GE++ALTGARLNGKELV  GLATH+VPS     
Sbjct: 138 FATPEATIGFHTDCGFSYMLSHLPGHLGEFIALTGARLNGKELVTVGLATHYVPSEKMPE 197

Query: 363 XXXXXXXXXSGDVHAVKSVIQEFSSDVSLDDGSILRKQAIIDK 491
                    SGD +A+KS I+EFS DV +D+ S+L KQ+ I++
Sbjct: 198 LEKRLMCLNSGDRNAIKSAIEEFSLDVKVDEDSVLNKQSTINE 240


>tpg|DAA59558.1| TPA: hypothetical protein ZEAMMB73_070975 [Zea mays]
          Length = 383

 Score =  238 bits (607), Expect = 4e-61
 Identities = 118/163 (72%), Positives = 129/163 (79%)
 Frame = +3

Query: 3   YDGRNSYDSCLEVVYRMYWLCYHNHTYKKTQVALAHGIVIGGGASLMVPMKFSVVTEKTV 182
           Y+GR S DSCLEVVYRMYWLCYH HTYKKTQVAL  GI +GGGASLMVPMKFSVVTEKTV
Sbjct: 78  YEGRKSKDSCLEVVYRMYWLCYHIHTYKKTQVALVQGISMGGGASLMVPMKFSVVTEKTV 137

Query: 183 FSMPEASIGFHTDCSFSYILSHLPGHMGEYLALTGARLNGKELVAAGLATHFVPSXXXXX 362
           F+ PEASIGFH DC FSY+LSHLPGH+GEYLALTGARLNGKELV AGLATHFVP      
Sbjct: 138 FATPEASIGFHVDCGFSYMLSHLPGHLGEYLALTGARLNGKELVVAGLATHFVPLEKLPE 197

Query: 363 XXXXXXXXXSGDVHAVKSVIQEFSSDVSLDDGSILRKQAIIDK 491
                     GD +AVK+ I+EFS  V LD+ SIL K+ IID+
Sbjct: 198 LEKRLISLNVGDENAVKATIEEFSLHVQLDEDSILNKKQIIDE 240


Top