BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014290
         (994 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283276.1| PREDICTED: ribosomal RNA large subunit methy...   349   5e-94
ref|XP_002531569.1| ftsj, putative [Ricinus communis] gi|2235287...   348   1e-93
ref|XP_002316277.1| predicted protein [Populus trichocarpa] gi|2...   340   4e-91
ref|XP_004142767.1| PREDICTED: ribosomal RNA large subunit methy...   323   5e-86
ref|XP_002871589.1| hypothetical protein ARALYDRAFT_325857 [Arab...   314   2e-83

>ref|XP_002283276.1| PREDICTED: ribosomal RNA large subunit methyltransferase E [Vitis
           vinifera] gi|296086215|emb|CBI31656.3| unnamed protein
           product [Vitis vinifera]
          Length = 233

 Score =  349 bits (896), Expect = 5e-94
 Identities = 175/226 (77%), Positives = 193/226 (85%)
 Frame = +2

Query: 56  PDFYYREAQRLGYLARSAFKLLQMQNKYKLITPGASVLDLGCAPGAWLQVACQSLGPLKK 235
           PDF+YREAQRLGY ARSAFKLLQMQ +YKLI PG+SVLDLGCAPGAWLQVACQSLGPLK 
Sbjct: 7   PDFFYREAQRLGYAARSAFKLLQMQKQYKLIKPGSSVLDLGCAPGAWLQVACQSLGPLKN 66

Query: 236 GGMVVGIDLKKVKVPAVHCDSRVQTFCADVMDFPKDQVMALSPKGKGFSVILSDMCPLVS 415
           GG+VVGIDLKKVKVP++HCDSRV+T CADVM  PKD++ A SP+ KGFSVILSDMCPLVS
Sbjct: 67  GGVVVGIDLKKVKVPSMHCDSRVKTVCADVMKLPKDEIRAFSPQRKGFSVILSDMCPLVS 126

Query: 416 GITTKDAALSIELGMRALDLAVGASDLPLPDDDIHEENQSDGSCSGEDEKGILQPGGNLV 595
           GITTKDA LS ELGM+AL LAV    L    D+I +    D S SG D+ GILQPGG+LV
Sbjct: 127 GITTKDAVLSAELGMQALHLAVRGPALAPSGDEIQKGEHHDDSTSGPDDDGILQPGGHLV 186

Query: 596 IKLLESEDSQEFSQICKARFRKASWLRPKATRSSSREIYLICQGLQ 733
           IKLLESED+Q FS+ICK  FRKASWLRPKATRSSSREIYLICQGL+
Sbjct: 187 IKLLESEDAQGFSRICKPLFRKASWLRPKATRSSSREIYLICQGLR 232


>ref|XP_002531569.1| ftsj, putative [Ricinus communis] gi|223528799|gb|EEF30805.1| ftsj,
           putative [Ricinus communis]
          Length = 228

 Score =  348 bits (892), Expect = 1e-93
 Identities = 174/227 (76%), Positives = 200/227 (88%)
 Frame = +2

Query: 53  APDFYYREAQRLGYLARSAFKLLQMQNKYKLITPGASVLDLGCAPGAWLQVACQSLGPLK 232
           APDF+YREAQRLGY+ARSAFKLLQ+Q ++KLITPG+SVLDLGCAPGAWLQVACQSLGPLK
Sbjct: 6   APDFFYREAQRLGYVARSAFKLLQIQKQHKLITPGSSVLDLGCAPGAWLQVACQSLGPLK 65

Query: 233 KGGMVVGIDLKKVKVPAVHCDSRVQTFCADVMDFPKDQVMALSPKGKGFSVILSDMCPLV 412
            GG VVGIDLKKVKVP  +CD+RV+T CADVM+ P+DQV ALS + KGFSV+LSDMCP V
Sbjct: 66  NGGSVVGIDLKKVKVPNPYCDARVKTVCADVMNLPRDQVRALSLQQKGFSVVLSDMCPPV 125

Query: 413 SGITTKDAALSIELGMRALDLAVGASDLPLPDDDIHEENQSDGSCSGEDEKGILQPGGNL 592
           SGITTKDAALS+ELGM+ALD+A+G +    PDD    ENQ+D S SGE++ G+LQ GG+L
Sbjct: 126 SGITTKDAALSMELGMQALDIAIGGAASAHPDD----ENQNDDSTSGENDNGVLQAGGHL 181

Query: 593 VIKLLESEDSQEFSQICKARFRKASWLRPKATRSSSREIYLICQGLQ 733
           VIKLLESED QEF++ICK  FRKASWLRPKATRSSSREIYLICQGL+
Sbjct: 182 VIKLLESEDIQEFTRICKPLFRKASWLRPKATRSSSREIYLICQGLK 228


>ref|XP_002316277.1| predicted protein [Populus trichocarpa] gi|222865317|gb|EEF02448.1|
           predicted protein [Populus trichocarpa]
          Length = 232

 Score =  340 bits (871), Expect = 4e-91
 Identities = 172/225 (76%), Positives = 194/225 (86%)
 Frame = +2

Query: 56  PDFYYREAQRLGYLARSAFKLLQMQNKYKLITPGASVLDLGCAPGAWLQVACQSLGPLKK 235
           PDF+YREAQRLGY+ARSAFKLLQ+Q K+KLI PG+SVLDLGCAPGAWLQVACQSLGPLK 
Sbjct: 7   PDFFYREAQRLGYVARSAFKLLQIQKKHKLIAPGSSVLDLGCAPGAWLQVACQSLGPLKN 66

Query: 236 GGMVVGIDLKKVKVPAVHCDSRVQTFCADVMDFPKDQVMALSPKGKGFSVILSDMCPLVS 415
           GG VVGIDLKKVKVP ++CDSRVQT CADVM  PK+QV ALSP+ KGFSV+LSDMCPLVS
Sbjct: 67  GGAVVGIDLKKVKVPPLYCDSRVQTVCADVMKLPKNQVRALSPRQKGFSVVLSDMCPLVS 126

Query: 416 GITTKDAALSIELGMRALDLAVGASDLPLPDDDIHEENQSDGSCSGEDEKGILQPGGNLV 595
           GITT+DAALS ELGM+AL LAVG +     D+   +   +D  C+  D+ GILQPGG+LV
Sbjct: 127 GITTRDAALSAELGMQALGLAVGRAATAHLDEIRTDRLLNDSVCTA-DDNGILQPGGHLV 185

Query: 596 IKLLESEDSQEFSQICKARFRKASWLRPKATRSSSREIYLICQGL 730
           IKLLESED++EFS+ICK  FRKASWLRPKATRSSSREIYLICQGL
Sbjct: 186 IKLLESEDNKEFSRICKPLFRKASWLRPKATRSSSREIYLICQGL 230


>ref|XP_004142767.1| PREDICTED: ribosomal RNA large subunit methyltransferase E-like
           [Cucumis sativus] gi|449528435|ref|XP_004171210.1|
           PREDICTED: ribosomal RNA large subunit methyltransferase
           E-like [Cucumis sativus]
          Length = 238

 Score =  323 bits (827), Expect = 5e-86
 Identities = 164/228 (71%), Positives = 196/228 (85%), Gaps = 2/228 (0%)
 Frame = +2

Query: 53  APDFYYREAQRLGYLARSAFKLLQMQNKYKLITPGASVLDLGCAPGAWLQVACQSLGPLK 232
           APDF+YREAQRLGY+ARSAFKLLQ+QN++KLIT G+SVLDLGCAPGAWLQVACQSLGP +
Sbjct: 6   APDFFYREAQRLGYVARSAFKLLQIQNQFKLITSGSSVLDLGCAPGAWLQVACQSLGPPR 65

Query: 233 KGGMVVGIDLKKVKVPAVHCDSRVQTFCADVMDFPKDQVMALSPKGKGFSVILSDMCPLV 412
            GG V+GID+KKVKVP +HCDSRVQT  ADVM+ PK ++ +LSPK KGFSVILSDMCPLV
Sbjct: 66  NGGSVLGIDIKKVKVPHMHCDSRVQTVSADVMNLPKSKLKSLSPKEKGFSVILSDMCPLV 125

Query: 413 SGITTKDAALSIELGMRALDLAVGASDLPLPDDDIH--EENQSDGSCSGEDEKGILQPGG 586
           SGITT+DAALS+ELGM+A++LA+G + L +  D IH  +++  D S S  D  G+L+ GG
Sbjct: 126 SGITTRDAALSVELGMQAVNLALGEAALGV-GDVIHGKDKDSVDDSTSASDCDGVLRQGG 184

Query: 587 NLVIKLLESEDSQEFSQICKARFRKASWLRPKATRSSSREIYLICQGL 730
           +LV+KLLESED+QEFS++ K  FRKASWLRPKATRSSSREIYLICQ L
Sbjct: 185 HLVLKLLESEDTQEFSRMLKPLFRKASWLRPKATRSSSREIYLICQSL 232


>ref|XP_002871589.1| hypothetical protein ARALYDRAFT_325857 [Arabidopsis lyrata subsp.
           lyrata] gi|297317426|gb|EFH47848.1| hypothetical protein
           ARALYDRAFT_325857 [Arabidopsis lyrata subsp. lyrata]
          Length = 229

 Score =  314 bits (805), Expect = 2e-83
 Identities = 160/226 (70%), Positives = 187/226 (82%)
 Frame = +2

Query: 56  PDFYYREAQRLGYLARSAFKLLQMQNKYKLITPGASVLDLGCAPGAWLQVACQSLGPLKK 235
           PDF+YREAQRLGY+ARSAFKLLQ+Q +YKLI PG+SVLDLGCAPGAWLQVACQSLGPLK 
Sbjct: 7   PDFFYREAQRLGYVARSAFKLLQIQKQYKLIKPGSSVLDLGCAPGAWLQVACQSLGPLKS 66

Query: 236 GGMVVGIDLKKVKVPAVHCDSRVQTFCADVMDFPKDQVMALSPKGKGFSVILSDMCPLVS 415
           GG+VVG+D+KKVKVP   CDSRVQT  ADV++FP+  +  LSP+  GFSVILSDMC  VS
Sbjct: 67  GGIVVGMDIKKVKVPP-QCDSRVQTIAADVLNFPRQTIRELSPQQLGFSVILSDMCHSVS 125

Query: 416 GITTKDAALSIELGMRALDLAVGASDLPLPDDDIHEENQSDGSCSGEDEKGILQPGGNLV 595
           GITT+DAALS ELGMRALDLAVG + +    DD  + +  D   S E  +G+L+ GG+LV
Sbjct: 126 GITTRDAALSAELGMRALDLAVGQAAISQSPDD--DNDGGDEVPSNESRRGVLRHGGHLV 183

Query: 596 IKLLESEDSQEFSQICKARFRKASWLRPKATRSSSREIYLICQGLQ 733
           IKLLESED+Q+F++ICK  F KASWLRPKATRSSSREIYLICQG +
Sbjct: 184 IKLLESEDAQDFARICKPIFNKASWLRPKATRSSSREIYLICQGFR 229