BLASTX nr result

ID: Coptis23_contig00014270 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014270
         (1939 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268382.1| PREDICTED: xylogalacturonan beta-1,3-xylosyl...   654   0.0  
ref|XP_002530948.1| catalytic, putative [Ricinus communis] gi|22...   653   0.0  
emb|CAN68950.1| hypothetical protein VITISV_039537 [Vitis vinifera]   650   0.0  
ref|XP_003517832.1| PREDICTED: xylogalacturonan beta-1,3-xylosyl...   642   0.0  
gb|AAX33321.1| secondary cell wall-related glycosyltransferase f...   617   e-174

>ref|XP_002268382.1| PREDICTED: xylogalacturonan beta-1,3-xylosyltransferase [Vitis
            vinifera]
          Length = 488

 Score =  654 bits (1688), Expect = 0.0
 Identities = 318/469 (67%), Positives = 375/469 (79%), Gaps = 1/469 (0%)
 Frame = -1

Query: 1645 MADRNTPHLVGSISRKXXXXXXXXXXXXXXXXXXXXFRSTGHPHFIDHSLLPNSKLFSVI 1466
            MA+RN   L G ++R                      RSTG P FIDHSLLPNSKLF+V 
Sbjct: 1    MAERNASPL-GFVTRNSLLCLFSVASILFILSWLSVLRSTGRPRFIDHSLLPNSKLFAVT 59

Query: 1465 EN-NDSSQALYDPSYKVDGREVDPQENPGVICKLSKVPLKVFMYDMPPEFHFALLDWNAQ 1289
            +N N  SQ   D    ++  E   +    V C  +   LKVFMYD+P EFHF LLDW   
Sbjct: 60   DNGNSESQNQNDIEPSIESEEKALEGKNSVKCGSNYPVLKVFMYDLPAEFHFGLLDWAPA 119

Query: 1288 GDSVWPDIKTKIPDYPGGLNLQHSIEYWLTLDLLSSSFRDQNSGSSAVRVLNSSEADVIF 1109
            G+SVWPDI+TK P YPGGLNLQHSIEYWLTLDLLSS F +  +  +A+RV NSSEADVIF
Sbjct: 120  GESVWPDIRTKFPLYPGGLNLQHSIEYWLTLDLLSSEFPENQNARAAIRVHNSSEADVIF 179

Query: 1108 VPYFSSLSYNRHSKVKPPEKTSQNKMLQEKLVRYLTSQEEWKRSGGRDHVVMAHHPNSML 929
            VP+FSSLSYN   K K  +K ++N +LQ+KLV++LT+QEEW RS GRDH++MAHHPNSML
Sbjct: 180  VPFFSSLSYNHFGKFKGRQKKNENNLLQDKLVKFLTAQEEWIRSEGRDHIIMAHHPNSML 239

Query: 928  DARVKLWPAMFILSDFGRYPPTVANVEKDVIAPYKHVIRTFVHDLSGFEDRPTLLYFQGA 749
            DAR+KLWPA+FILSDFGRYPP +ANV KDVIAPYKHVI++F++D S F+ RPTLLYFQGA
Sbjct: 240  DARMKLWPAIFILSDFGRYPPNIANVGKDVIAPYKHVIKSFINDTSDFDSRPTLLYFQGA 299

Query: 748  IYRKDGGVIRQELFYLLKDEENIHFSFGSVQGDGIRKATQGMQSSKFCLNIAGDTPSSNR 569
            IYRKDGG IRQELFYLLKDE+++HF+FG+ QG+GI KA+QGM SSKFCLNIAGDTPSSNR
Sbjct: 300  IYRKDGGFIRQELFYLLKDEKDVHFAFGNTQGNGINKASQGMHSSKFCLNIAGDTPSSNR 359

Query: 568  LFDAIASHCVPVIISDEIELPYEDVLDYSEFCIFIRTSDALKEKFVIKLIRSIGKEEWTR 389
            LFDAIASHCVPVIISDEIELPYEDVLDYS+FCIF+RTSDALK+KF+IKLIRSI K+EWTR
Sbjct: 360  LFDAIASHCVPVIISDEIELPYEDVLDYSQFCIFVRTSDALKDKFLIKLIRSIKKDEWTR 419

Query: 388  MWNKLKEIERFFEFRYPSHEDDAVQMIWQAVARKVPAVKLKIHKSQRFA 242
            MW +LKE+E FFEF+YPS E DAVQMIWQA+ RKVPA+++K+HKS+RF+
Sbjct: 420  MWRRLKEVENFFEFQYPSKEGDAVQMIWQAITRKVPAIRMKLHKSRRFS 468


>ref|XP_002530948.1| catalytic, putative [Ricinus communis] gi|223529463|gb|EEF31420.1|
            catalytic, putative [Ricinus communis]
          Length = 512

 Score =  653 bits (1684), Expect = 0.0
 Identities = 325/482 (67%), Positives = 382/482 (79%), Gaps = 14/482 (2%)
 Frame = -1

Query: 1645 MADRNTPHLVGSISRKXXXXXXXXXXXXXXXXXXXXFRSTGHPHFIDHSLLPNSKLFSVI 1466
            MA++++  LV  ISRK                     RSTG P+FID SL+ N+ L+S+I
Sbjct: 1    MAEKHSSSLV-VISRKSLFGLFSFVLVLFILSWFFVLRSTGRPNFIDGSLI-NNPLYSII 58

Query: 1465 ENNDSSQALYDPSYKVDGR-------EVDPQEN---PGVICKLS----KVPLKVFMYDMP 1328
            +N   + ++   +   D R       E  PQE      V C       K PLKVFMYD+P
Sbjct: 59   DNGSDAPSIGSRATLADSRGEGQEEAEETPQEKVDVKDVKCNTPLENRKEPLKVFMYDLP 118

Query: 1327 PEFHFALLDWNAQGDSVWPDIKTKIPDYPGGLNLQHSIEYWLTLDLLSSSFRDQNSGSSA 1148
            PEFHF LLDW AQGDSVWPD++TKIP YPGGLNLQHSIEYWLTLDLL+S         SA
Sbjct: 119  PEFHFELLDWKAQGDSVWPDLRTKIPGYPGGLNLQHSIEYWLTLDLLASEISGIPRAGSA 178

Query: 1147 VRVLNSSEADVIFVPYFSSLSYNRHSKVKPPEKTSQNKMLQEKLVRYLTSQEEWKRSGGR 968
            +RV NSSEADVIFVP+FSSLSYNR+SKV P +K S+NK+LQEKLVRY+TSQ EWKRS G+
Sbjct: 179  IRVRNSSEADVIFVPFFSSLSYNRYSKVNPHQKRSKNKLLQEKLVRYVTSQMEWKRSQGQ 238

Query: 967  DHVVMAHHPNSMLDARVKLWPAMFILSDFGRYPPTVANVEKDVIAPYKHVIRTFVHDLSG 788
            DH+++AHHPNSMLDAR+KLWPA+FIL+DFGRYPP +ANV+KD+IAPYKHVIR++  D S 
Sbjct: 239  DHIILAHHPNSMLDARMKLWPALFILADFGRYPPNIANVDKDLIAPYKHVIRSYADDSST 298

Query: 787  FEDRPTLLYFQGAIYRKDGGVIRQELFYLLKDEENIHFSFGSVQGDGIRKATQGMQSSKF 608
            F+ RPTLLYFQGAIYRKDGG  RQELFYLLKDE+++HF FGSVQ DGI KA+QGM +SKF
Sbjct: 299  FDSRPTLLYFQGAIYRKDGGFARQELFYLLKDEKDVHFQFGSVQKDGINKASQGMHTSKF 358

Query: 607  CLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPYEDVLDYSEFCIFIRTSDALKEKFVI 428
            CLNIAGDTPSSNRLFDAIASHCVPVIISD+IELPYEDVLDYS+FCIF+RTSDA+KEKF+I
Sbjct: 359  CLNIAGDTPSSNRLFDAIASHCVPVIISDDIELPYEDVLDYSQFCIFVRTSDAIKEKFLI 418

Query: 427  KLIRSIGKEEWTRMWNKLKEIERFFEFRYPSHEDDAVQMIWQAVARKVPAVKLKIHKSQR 248
             LIR IGK+EWT+MW KLKE+ERFFEF+YPS E DAVQMIWQAVARKVPA+++KI+KS R
Sbjct: 419  NLIRGIGKDEWTQMWQKLKEVERFFEFQYPSKEGDAVQMIWQAVARKVPAIRMKINKSMR 478

Query: 247  FA 242
            F+
Sbjct: 479  FS 480


>emb|CAN68950.1| hypothetical protein VITISV_039537 [Vitis vinifera]
          Length = 488

 Score =  650 bits (1678), Expect = 0.0
 Identities = 316/469 (67%), Positives = 373/469 (79%), Gaps = 1/469 (0%)
 Frame = -1

Query: 1645 MADRNTPHLVGSISRKXXXXXXXXXXXXXXXXXXXXFRSTGHPHFIDHSLLPNSKLFSVI 1466
            MA+RN   L G ++R                      RSTG P FIDHSLLPNSKLF+V 
Sbjct: 1    MAERNASPL-GFVTRNSLLCLFSVASILFILSWLSVLRSTGRPRFIDHSLLPNSKLFAVT 59

Query: 1465 EN-NDSSQALYDPSYKVDGREVDPQENPGVICKLSKVPLKVFMYDMPPEFHFALLDWNAQ 1289
            +N N  SQ   D    ++  E   +    V C  +   LKVFMYD+P EFHF LLDW   
Sbjct: 60   DNGNSESQNQNDIEPSIESEEKALEGKNSVKCGSNYPVLKVFMYDLPAEFHFGLLDWAPA 119

Query: 1288 GDSVWPDIKTKIPDYPGGLNLQHSIEYWLTLDLLSSSFRDQNSGSSAVRVLNSSEADVIF 1109
            G+SVWPDI+TK P YPGGLNLQHSIEYWLTLDLLSS F +  +   A+RV NSSEADVIF
Sbjct: 120  GESVWPDIRTKFPLYPGGLNLQHSIEYWLTLDLLSSEFPENQNARXAIRVHNSSEADVIF 179

Query: 1108 VPYFSSLSYNRHSKVKPPEKTSQNKMLQEKLVRYLTSQEEWKRSGGRDHVVMAHHPNSML 929
            VP+FSSLSYN   K K  +K ++N +LQ+KLV++LT+QEEW RS GRDH++MAHHPNSML
Sbjct: 180  VPFFSSLSYNHFGKFKGRQKKNENNLLQDKLVKFLTAQEEWIRSEGRDHIIMAHHPNSML 239

Query: 928  DARVKLWPAMFILSDFGRYPPTVANVEKDVIAPYKHVIRTFVHDLSGFEDRPTLLYFQGA 749
            DAR+KLWPA+FILSDFGRYPP +ANV KD+IAPYKHVI++F++D S F+ RPTLLYFQGA
Sbjct: 240  DARMKLWPAIFILSDFGRYPPNIANVGKDLIAPYKHVIKSFINDTSDFDSRPTLLYFQGA 299

Query: 748  IYRKDGGVIRQELFYLLKDEENIHFSFGSVQGDGIRKATQGMQSSKFCLNIAGDTPSSNR 569
            IYRKDGG IRQELFYLLKDE+++HF+FG+ QG+GI KA+QGM SSKFCLNIAGDTPSSNR
Sbjct: 300  IYRKDGGFIRQELFYLLKDEKDVHFAFGNTQGNGINKASQGMHSSKFCLNIAGDTPSSNR 359

Query: 568  LFDAIASHCVPVIISDEIELPYEDVLDYSEFCIFIRTSDALKEKFVIKLIRSIGKEEWTR 389
            LFDAIASHCVPVIISDEIELPYEDVLDYS+FCIF+RTSDALK+KF+ KLIRSI K+EWTR
Sbjct: 360  LFDAIASHCVPVIISDEIELPYEDVLDYSQFCIFVRTSDALKDKFLXKLIRSIKKDEWTR 419

Query: 388  MWNKLKEIERFFEFRYPSHEDDAVQMIWQAVARKVPAVKLKIHKSQRFA 242
            MW +LKE+E FFEF+YPS E DAVQMIWQA+ RKVPA+++K+HKS+RF+
Sbjct: 420  MWRRLKEVENFFEFQYPSKEGDAVQMIWQAITRKVPAIRMKLHKSRRFS 468


>ref|XP_003517832.1| PREDICTED: xylogalacturonan beta-1,3-xylosyltransferase-like [Glycine
            max]
          Length = 509

 Score =  642 bits (1657), Expect = 0.0
 Identities = 307/452 (67%), Positives = 371/452 (82%), Gaps = 21/452 (4%)
 Frame = -1

Query: 1534 RSTGHPHFIDHSLLPNSKLFSVIENNDS-------SQALYDPSYKVDGREVDPQ------ 1394
            RST  PHFIDH+LLPNSKLFS ++ + S         +  + +  VD  +V+        
Sbjct: 38   RSTSRPHFIDHNLLPNSKLFSTLDGSKSHMQKQNVESSFGNRAILVDSEDVEEASETKAR 97

Query: 1393 -------ENPGVICKLS-KVPLKVFMYDMPPEFHFALLDWNAQGDSVWPDIKTKIPDYPG 1238
                   ++ G  C  + +V LKVFMYD+PPEFHF LLDW   G+SVWPD++T IP YPG
Sbjct: 98   NGKEKLVKHDGKKCNRNDEVVLKVFMYDLPPEFHFGLLDWKPSGNSVWPDVRTNIPGYPG 157

Query: 1237 GLNLQHSIEYWLTLDLLSSSFRDQNSGSSAVRVLNSSEADVIFVPYFSSLSYNRHSKVKP 1058
            GLNLQHSIE+WLTLD+L+S F   +   + +RV NSSEAD+IFVP+FSSLSYNR+SK KP
Sbjct: 158  GLNLQHSIEFWLTLDILASEFPQASKARTVIRVQNSSEADIIFVPFFSSLSYNRYSKSKP 217

Query: 1057 PEKTSQNKMLQEKLVRYLTSQEEWKRSGGRDHVVMAHHPNSMLDARVKLWPAMFILSDFG 878
              K S+NK+LQEKLV YL +QEEWKRSGG+DH+++AHHPNSMLDAR+KLWPA FILSDFG
Sbjct: 218  HVKKSKNKILQEKLVTYLMAQEEWKRSGGKDHLILAHHPNSMLDARMKLWPATFILSDFG 277

Query: 877  RYPPTVANVEKDVIAPYKHVIRTFVHDLSGFEDRPTLLYFQGAIYRKDGGVIRQELFYLL 698
            RYPP +ANVEKDVIAPYKH+I ++V+D S F+ RPTLLYFQGAIYRKDGG+ RQELFYLL
Sbjct: 278  RYPPNIANVEKDVIAPYKHLISSYVNDNSNFDSRPTLLYFQGAIYRKDGGLARQELFYLL 337

Query: 697  KDEENIHFSFGSVQGDGIRKATQGMQSSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDE 518
            KDE+++HFSFGS+  DGI+KAT+GM++SKFCLNIAGDTPSSNRLFDAIASHCVPVIISD+
Sbjct: 338  KDEKDVHFSFGSIGKDGIKKATEGMRASKFCLNIAGDTPSSNRLFDAIASHCVPVIISDK 397

Query: 517  IELPYEDVLDYSEFCIFIRTSDALKEKFVIKLIRSIGKEEWTRMWNKLKEIERFFEFRYP 338
            IELPYEDV+DYSEFCIF+RTSDA+KEKF+I  IR I KEEWTRMWNKLKE+E FFEF +P
Sbjct: 398  IELPYEDVIDYSEFCIFVRTSDAIKEKFLINFIRGIAKEEWTRMWNKLKEVEHFFEFHFP 457

Query: 337  SHEDDAVQMIWQAVARKVPAVKLKIHKSQRFA 242
            S E+DAVQMIWQAVARKVPA++LK+++ +RF+
Sbjct: 458  SKENDAVQMIWQAVARKVPAMRLKLNRFERFS 489


>gb|AAX33321.1| secondary cell wall-related glycosyltransferase family 47 [Populus
            tremula x Populus tremuloides]
          Length = 509

 Score =  617 bits (1590), Expect = e-174
 Identities = 310/489 (63%), Positives = 372/489 (76%), Gaps = 21/489 (4%)
 Frame = -1

Query: 1645 MADRNTPHLVGSISRKXXXXXXXXXXXXXXXXXXXXFRSTGHPHFIDHSLLPNSKLFSVI 1466
            MA++++   +G ISRK                     RSTG   FID SLLP+ K  SVI
Sbjct: 1    MAEKHSSSSLGVISRKSMFCLFSLVSALFILSWFLMLRSTGSAGFIDLSLLPHPKPNSVI 60

Query: 1465 E--------NNDSSQALYDPSYKV------DGREVDPQENPG---VIC----KLSKVPLK 1349
            +         ND   ++ + +  +      DG E  P+E      V C    K     LK
Sbjct: 61   DIGNSASWNRNDVEPSIGNRARAIPVDNEGDGGEEKPREKDDLGDVKCNSFDKNCNQVLK 120

Query: 1348 VFMYDMPPEFHFALLDWNAQGDSVWPDIKTKIPDYPGGLNLQHSIEYWLTLDLLSSSFRD 1169
            VFMYD+P EFHF LLDW  QG SVWPD++ K+P YPGGLNLQHSIEYWLT+DLL+S    
Sbjct: 121  VFMYDLPSEFHFGLLDWKPQGGSVWPDLRAKVPAYPGGLNLQHSIEYWLTMDLLASEVPG 180

Query: 1168 QNSGSSAVRVLNSSEADVIFVPYFSSLSYNRHSKVKPPEKTSQNKMLQEKLVRYLTSQEE 989
                 SAVRV NSSEADVIFVP+FSS+SYNR+SKV P +K S+NK L+EKLV+++TSQ+E
Sbjct: 181  IPRAGSAVRVQNSSEADVIFVPFFSSISYNRYSKVNPHQKKSKNKSLEEKLVKFVTSQKE 240

Query: 988  WKRSGGRDHVVMAHHPNSMLDARVKLWPAMFILSDFGRYPPTVANVEKDVIAPYKHVIRT 809
            WKRSGGRDH+++AHHPNSML AR+KLW AMFIL+DFGRY P +ANV KDVIAPYKHVI++
Sbjct: 241  WKRSGGRDHIILAHHPNSMLYARMKLWTAMFILADFGRYSPNIANVGKDVIAPYKHVIKS 300

Query: 808  FVHDLSGFEDRPTLLYFQGAIYRKDGGVIRQELFYLLKDEENIHFSFGSVQGDGIRKATQ 629
            + +D S F+ RPTLLYFQGAIYRKDGG  RQELFY LKDE+++HF FGSVQ DG+ KA+Q
Sbjct: 301  YANDSSNFDSRPTLLYFQGAIYRKDGGFARQELFYALKDEKDVHFQFGSVQKDGVSKASQ 360

Query: 628  GMQSSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDEIELPYEDVLDYSEFCIFIRTSDA 449
            GM SSKFCLNIAGDTPSSNRLFDAIASHCVPVIISD+IELPYEDVLDYS+FCIF+RTSDA
Sbjct: 361  GMHSSKFCLNIAGDTPSSNRLFDAIASHCVPVIISDDIELPYEDVLDYSQFCIFVRTSDA 420

Query: 448  LKEKFVIKLIRSIGKEEWTRMWNKLKEIERFFEFRYPSHEDDAVQMIWQAVARKVPAVKL 269
            ++EKF+I L+RSI K+EWTRMW +LKE+E FFEF+YPS E DAVQMIWQAVARKVPA++L
Sbjct: 421  VREKFLINLVRSIKKDEWTRMWQRLKEVENFFEFQYPSKEGDAVQMIWQAVARKVPAIRL 480

Query: 268  KIHKSQRFA 242
            K++K +RF+
Sbjct: 481  KVNKFRRFS 489


Top