BLASTX nr result

ID: Coptis23_contig00014262 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014262
         (660 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK94924.1| unknown [Populus trichocarpa]                          155   8e-36
dbj|BAD54214.1| unknown protein [Oryza sativa Japonica Group] gi...   143   3e-32
ref|NP_001057778.2| Os06g0530300 [Oryza sativa Japonica Group] g...   143   3e-32
ref|NP_001150540.1| uncharacterized protein LOC100284172 [Zea ma...   143   3e-32
gb|EEC80744.1| hypothetical protein OsI_23226 [Oryza sativa Indi...   140   3e-31

>gb|ABK94924.1| unknown [Populus trichocarpa]
          Length = 268

 Score =  155 bits (391), Expect = 8e-36
 Identities = 96/191 (50%), Positives = 122/191 (63%), Gaps = 10/191 (5%)
 Frame = -3

Query: 655 EDVNFRTVFRAGGFPSTHSAGVVAAATSLALERGFSDSIFGMAVIFASLVMYDAQAVRRE 476
           +D +F+T F+AGGFPSTHS+ VVAAAT LALERGFSDSIFG+AV++A LVMYDAQ VRRE
Sbjct: 85  KDFDFKTTFQAGGFPSTHSSSVVAAATCLALERGFSDSIFGLAVVYAFLVMYDAQGVRRE 144

Query: 475 VGNHAKVLNKEILVKTQNKPIPNGKKDVLVYSKDRISVFTQALASSMPISGEASTSSVNS 296
           VGNHAK LNK +     N  + +  +D L+ S++       AL     +S E      NS
Sbjct: 145 VGNHAKALNKMLPKTEVNSKVCS--RDDLIDSQEAPEENLGAL-----LSKEERPFLPNS 197

Query: 295 ANPPMYLASE---KQPTSSLSVDDLGLKETCRPL-------LEESIGHTVVEVVAGALLG 146
            N P+ L +E   +Q +  L+   L   E            L+ESIGHT VEV+AGALLG
Sbjct: 198 TNSPLLLETENKTRQTSQRLAFSSLTAAEEATEKIPCSSAPLKESIGHTEVEVIAGALLG 257

Query: 145 FLVTLAVYSIL 113
           F V++AVY+IL
Sbjct: 258 FFVSVAVYTIL 268


>dbj|BAD54214.1| unknown protein [Oryza sativa Japonica Group]
           gi|53793250|dbj|BAD54474.1| unknown protein [Oryza
           sativa Japonica Group] gi|125597435|gb|EAZ37215.1|
           hypothetical protein OsJ_21555 [Oryza sativa Japonica
           Group]
          Length = 291

 Score =  143 bits (360), Expect = 3e-32
 Identities = 89/192 (46%), Positives = 121/192 (63%), Gaps = 14/192 (7%)
 Frame = -3

Query: 646 NFRTVFRAGGFPSTHSAGVVAAATSLALERGFSDSIFGMAVIFASLVMYDAQAVRREVGN 467
           + R   R+GG PSTHSA VVA ATSL LERGF+DSIFGM+V+FA++VMYDAQ VRREVGN
Sbjct: 104 DLRAAVRSGGMPSTHSAAVVAVATSLGLERGFADSIFGMSVVFAAIVMYDAQGVRREVGN 163

Query: 466 HAKVLNKEILVKTQNKPIPNGKKDVLVYSKDRI-SVFTQALASSMPISGEASTSSVNSAN 290
           HA+VLNK  L+  + K   N   + L+ S   + S   + +A  + ++ +  +S  +SAN
Sbjct: 164 HARVLNK--LLTLREKITQNPDDNSLLSSTSELHSSKPETVAELVSVAEKLGSSQGSSAN 221

Query: 289 P-PMY------------LASEKQPTSSLSVDDLGLKETCRPLLEESIGHTVVEVVAGALL 149
           P P++             +SE + T    + +   +E  R  L ES+GHT ++V AGALL
Sbjct: 222 PFPIHSSGTKSSRLNALQSSETEVTEFTQLKEAYTEECDR--LSESVGHTELQVAAGALL 279

Query: 148 GFLVTLAVYSIL 113
           GFLVTL VY+ L
Sbjct: 280 GFLVTLVVYATL 291


>ref|NP_001057778.2| Os06g0530300 [Oryza sativa Japonica Group]
           gi|255677113|dbj|BAF19692.2| Os06g0530300, partial
           [Oryza sativa Japonica Group]
          Length = 258

 Score =  143 bits (360), Expect = 3e-32
 Identities = 89/192 (46%), Positives = 121/192 (63%), Gaps = 14/192 (7%)
 Frame = -3

Query: 646 NFRTVFRAGGFPSTHSAGVVAAATSLALERGFSDSIFGMAVIFASLVMYDAQAVRREVGN 467
           + R   R+GG PSTHSA VVA ATSL LERGF+DSIFGM+V+FA++VMYDAQ VRREVGN
Sbjct: 71  DLRAAVRSGGMPSTHSAAVVAVATSLGLERGFADSIFGMSVVFAAIVMYDAQGVRREVGN 130

Query: 466 HAKVLNKEILVKTQNKPIPNGKKDVLVYSKDRI-SVFTQALASSMPISGEASTSSVNSAN 290
           HA+VLNK  L+  + K   N   + L+ S   + S   + +A  + ++ +  +S  +SAN
Sbjct: 131 HARVLNK--LLTLREKITQNPDDNSLLSSTSELHSSKPETVAELVSVAEKLGSSQGSSAN 188

Query: 289 P-PMY------------LASEKQPTSSLSVDDLGLKETCRPLLEESIGHTVVEVVAGALL 149
           P P++             +SE + T    + +   +E  R  L ES+GHT ++V AGALL
Sbjct: 189 PFPIHSSGTKSSRLNALQSSETEVTEFTQLKEAYTEECDR--LSESVGHTELQVAAGALL 246

Query: 148 GFLVTLAVYSIL 113
           GFLVTL VY+ L
Sbjct: 247 GFLVTLVVYATL 258


>ref|NP_001150540.1| uncharacterized protein LOC100284172 [Zea mays]
           gi|195640014|gb|ACG39475.1| uncharacterized BCR, COG1963
           family protein [Zea mays]
          Length = 267

 Score =  143 bits (360), Expect = 3e-32
 Identities = 86/182 (47%), Positives = 117/182 (64%), Gaps = 3/182 (1%)
 Frame = -3

Query: 649 VNFRTVFRAGGFPSTHSAGVVAAATSLALERGFSDSIFGMAVIFASLVMYDAQAVRREVG 470
           ++ RTVFR+GG PSTHSA VVA ATSL LERGF+DSIFGM+V+FA++VMYDAQ VRREVG
Sbjct: 99  LDLRTVFRSGGMPSTHSASVVAVATSLGLERGFADSIFGMSVVFAAIVMYDAQGVRREVG 158

Query: 469 NHAKVLNKEILVKTQNKPIPNGKKDVLVYSKDRISVFTQALASSMPISGEASTSSVNSAN 290
           NHAK+LN+  ++K   + +P    +V + +   +SV  +A +++ P     S++     N
Sbjct: 159 NHAKILNRFWILK---EKVPLEYSEVDMAAPGFVSVTEEASSNASPSLKRGSSTESPRVN 215

Query: 289 PPMYLASEKQPTSSLSVDDLGLKETCRP---LLEESIGHTVVEVVAGALLGFLVTLAVYS 119
                 SE + T         LK+ C      L ES+GHT ++V  GALLGF V+LAVY+
Sbjct: 216 G--LRGSEPELTE--------LKQACVEEDYRLSESVGHTELQVTVGALLGFAVSLAVYA 265

Query: 118 IL 113
            L
Sbjct: 266 TL 267


>gb|EEC80744.1| hypothetical protein OsI_23226 [Oryza sativa Indica Group]
          Length = 288

 Score =  140 bits (352), Expect = 3e-31
 Identities = 88/193 (45%), Positives = 121/193 (62%), Gaps = 15/193 (7%)
 Frame = -3

Query: 646 NFRTVFRAGGFPSTHSAGVVAAATSLALERGFSDSIFGMAVIFASLVMYDAQAVRREVGN 467
           + R   R+GG PSTHSA VVA ATSL LERGF+DSIFGM+V+FA+++MYDAQ VRREVGN
Sbjct: 102 DLRAAVRSGGMPSTHSAAVVAVATSLGLERGFADSIFGMSVVFAAIIMYDAQGVRREVGN 161

Query: 466 HAKVLNKEILVK--TQNKPIPNGKKDVLVYSKDRISVFTQALASSMPISGEASTSSVNSA 293
           HA+VLNK + ++  TQN P  N        + +  S   + +A  + ++ +  +S  +SA
Sbjct: 162 HARVLNKLLTLREITQN-PDSNSLSS---STSELHSSKPETVAELVSVAEKLGSSQGSSA 217

Query: 292 NP-PMY------------LASEKQPTSSLSVDDLGLKETCRPLLEESIGHTVVEVVAGAL 152
           NP P++             +SE + T    + +   +E  R  L ES+GHT ++V AGAL
Sbjct: 218 NPFPIHSSGTKSSRLNALQSSETEVTEFTQLKEAYTEECDR--LSESVGHTELQVAAGAL 275

Query: 151 LGFLVTLAVYSIL 113
           LGFLVTL VY+ L
Sbjct: 276 LGFLVTLVVYATL 288


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