BLASTX nr result
ID: Coptis23_contig00014256
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00014256 (742 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI24253.3| unnamed protein product [Vitis vinifera] 266 3e-69 ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containi... 266 3e-69 ref|XP_002313262.1| predicted protein [Populus trichocarpa] gi|2... 243 3e-62 ref|XP_003623229.1| Pentatricopeptide repeat-containing protein ... 241 1e-61 ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containi... 240 2e-61 >emb|CBI24253.3| unnamed protein product [Vitis vinifera] Length = 582 Score = 266 bits (681), Expect = 3e-69 Identities = 127/238 (53%), Positives = 173/238 (72%) Frame = +3 Query: 12 NVVTFNLLIGGFLKARNVSKAREIWQDTLVAGVMPNAFTYSIMINGLCKMNMLDSAKEVL 191 N+VT+N+L+GG LKA + +A E+W+ L G +PN+FTYSI+I+G CKM ML+ AK + Sbjct: 314 NLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLF 373 Query: 192 CEMKTSGHTPTAYVYNPFLESLCKDGNLEQAMNLLGEMKDANCKPDVVSFNILINGMLND 371 CEM+T G P + YN + SLCK+G+LEQA +L EM +ANC+PD++SFN +I+G L Sbjct: 374 CEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKA 433 Query: 372 GNLQTAKELLEDMVQSGLNPDIVTYSTIIDRYSKIGQLNEAMTFFNYMIARGFAPDAIVC 551 G+ Q KEL MV+ GL PD +T+ST+I+R SK+G+L+EA + M+A GF PDA+V Sbjct: 434 GDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVY 493 Query: 552 DSLIKGFGARGQRKEVIDLLHQMAAKGVVLDVNIVSTILDCLCRDGESPDFLKLLPTF 725 DSL+KG ++G E+I+LLHQMAAKG VLD IVSTIL CLC + D ++LLPTF Sbjct: 494 DSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVMELLPTF 551 Score = 140 bits (353), Expect = 3e-31 Identities = 77/230 (33%), Positives = 121/230 (52%) Frame = +3 Query: 27 NLLIGGFLKARNVSKAREIWQDTLVAGVMPNAFTYSIMINGLCKMNMLDSAKEVLCEMKT 206 N+++ G + V +A + ++ V P+ +Y+ +INGLCK L A +L EM+ Sbjct: 2 NIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEA 61 Query: 207 SGHTPTAYVYNPFLESLCKDGNLEQAMNLLGEMKDANCKPDVVSFNILINGMLNDGNLQT 386 +G P + ++ LCKDG +++AM LL MK DVV + LI+G N+GNL Sbjct: 62 AGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDR 121 Query: 387 AKELLEDMVQSGLNPDIVTYSTIIDRYSKIGQLNEAMTFFNYMIARGFAPDAIVCDSLIK 566 KEL ++M+ G++ ++VTYS ++ ++GQ EA T N M G PD + LI Sbjct: 122 GKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLID 181 Query: 567 GFGARGQRKEVIDLLHQMAAKGVVLDVNIVSTILDCLCRDGESPDFLKLL 716 G G+ +DLL+ M KG + +L LC++G D K+L Sbjct: 182 GLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKIL 231 Score = 136 bits (342), Expect = 5e-30 Identities = 72/234 (30%), Positives = 121/234 (51%) Frame = +3 Query: 12 NVVTFNLLIGGFLKARNVSKAREIWQDTLVAGVMPNAFTYSIMINGLCKMNMLDSAKEVL 191 ++V++N LI G KA+ + +A + + AG PN+ T + +++GLCK +D A E+L Sbjct: 32 DIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELL 91 Query: 192 CEMKTSGHTPTAYVYNPFLESLCKDGNLEQAMNLLGEMKDANCKPDVVSFNILINGMLND 371 MK G +Y + C +GNL++ L EM +VV+++ L++G+ Sbjct: 92 EAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRL 151 Query: 372 GNLQTAKELLEDMVQSGLNPDIVTYSTIIDRYSKIGQLNEAMTFFNYMIARGFAPDAIVC 551 G + A +L M + G++PD+VTY+ +ID K G+ AM N M+ +G P + Sbjct: 152 GQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTY 211 Query: 552 DSLIKGFGARGQRKEVIDLLHQMAAKGVVLDVNIVSTILDCLCRDGESPDFLKL 713 + L+ G G + +L M KG DV +T++ LC G+ + LKL Sbjct: 212 NVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKL 265 Score = 119 bits (299), Expect = 5e-25 Identities = 66/236 (27%), Positives = 121/236 (51%), Gaps = 2/236 (0%) Frame = +3 Query: 12 NVVTFNLLIGGFLKARNVSKAREIWQDTLVAGVMPNAFTYSIMINGLCKMNMLDSAKEVL 191 +VV + LI GF N+ + +E++ + L G+ N TYS +++GLC++ A VL Sbjct: 102 DVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVL 161 Query: 192 CEMKTSGHTPTAYVYNPFLESLCKDGNLEQAMNLLGEMKDANCKPDVVSFNILINGMLND 371 M G P Y ++ LCKDG AM+LL M + +P V++N+L++G+ + Sbjct: 162 NAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKE 221 Query: 372 GNLQTAKELLEDMVQSGLNPDIVTYSTIIDRYSKIGQLNEAMTFFNYMI--ARGFAPDAI 545 G + A ++L M++ G D+VTY+T++ G+++EA+ FN M P+ Sbjct: 222 GLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVF 281 Query: 546 VCDSLIKGFGARGQRKEVIDLLHQMAAKGVVLDVNIVSTILDCLCRDGESPDFLKL 713 + LI G G+ + + + +M KG ++ + +L + G+ + ++L Sbjct: 282 TFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMEL 337 >ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g28010-like [Vitis vinifera] Length = 728 Score = 266 bits (681), Expect = 3e-69 Identities = 127/238 (53%), Positives = 173/238 (72%) Frame = +3 Query: 12 NVVTFNLLIGGFLKARNVSKAREIWQDTLVAGVMPNAFTYSIMINGLCKMNMLDSAKEVL 191 N+VT+N+L+GG LKA + +A E+W+ L G +PN+FTYSI+I+G CKM ML+ AK + Sbjct: 460 NLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLF 519 Query: 192 CEMKTSGHTPTAYVYNPFLESLCKDGNLEQAMNLLGEMKDANCKPDVVSFNILINGMLND 371 CEM+T G P + YN + SLCK+G+LEQA +L EM +ANC+PD++SFN +I+G L Sbjct: 520 CEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKA 579 Query: 372 GNLQTAKELLEDMVQSGLNPDIVTYSTIIDRYSKIGQLNEAMTFFNYMIARGFAPDAIVC 551 G+ Q KEL MV+ GL PD +T+ST+I+R SK+G+L+EA + M+A GF PDA+V Sbjct: 580 GDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVY 639 Query: 552 DSLIKGFGARGQRKEVIDLLHQMAAKGVVLDVNIVSTILDCLCRDGESPDFLKLLPTF 725 DSL+KG ++G E+I+LLHQMAAKG VLD IVSTIL CLC + D ++LLPTF Sbjct: 640 DSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVMELLPTF 697 Score = 143 bits (361), Expect = 3e-32 Identities = 79/235 (33%), Positives = 123/235 (52%) Frame = +3 Query: 12 NVVTFNLLIGGFLKARNVSKAREIWQDTLVAGVMPNAFTYSIMINGLCKMNMLDSAKEVL 191 NV N+++ G + V +A + ++ V P+ +Y+ +INGLCK L A +L Sbjct: 143 NVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLL 202 Query: 192 CEMKTSGHTPTAYVYNPFLESLCKDGNLEQAMNLLGEMKDANCKPDVVSFNILINGMLND 371 EM+ +G P + ++ LCKDG +++AM LL MK DVV + LI+G N+ Sbjct: 203 LEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNN 262 Query: 372 GNLQTAKELLEDMVQSGLNPDIVTYSTIIDRYSKIGQLNEAMTFFNYMIARGFAPDAIVC 551 GNL KEL ++M+ G++ ++VTYS ++ ++GQ EA T N M G PD + Sbjct: 263 GNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTY 322 Query: 552 DSLIKGFGARGQRKEVIDLLHQMAAKGVVLDVNIVSTILDCLCRDGESPDFLKLL 716 LI G G+ +DLL+ M KG + +L LC++G D K+L Sbjct: 323 TGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKIL 377 Score = 136 bits (342), Expect = 5e-30 Identities = 72/234 (30%), Positives = 121/234 (51%) Frame = +3 Query: 12 NVVTFNLLIGGFLKARNVSKAREIWQDTLVAGVMPNAFTYSIMINGLCKMNMLDSAKEVL 191 ++V++N LI G KA+ + +A + + AG PN+ T + +++GLCK +D A E+L Sbjct: 178 DIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELL 237 Query: 192 CEMKTSGHTPTAYVYNPFLESLCKDGNLEQAMNLLGEMKDANCKPDVVSFNILINGMLND 371 MK G +Y + C +GNL++ L EM +VV+++ L++G+ Sbjct: 238 EAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRL 297 Query: 372 GNLQTAKELLEDMVQSGLNPDIVTYSTIIDRYSKIGQLNEAMTFFNYMIARGFAPDAIVC 551 G + A +L M + G++PD+VTY+ +ID K G+ AM N M+ +G P + Sbjct: 298 GQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTY 357 Query: 552 DSLIKGFGARGQRKEVIDLLHQMAAKGVVLDVNIVSTILDCLCRDGESPDFLKL 713 + L+ G G + +L M KG DV +T++ LC G+ + LKL Sbjct: 358 NVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKL 411 Score = 122 bits (305), Expect = 1e-25 Identities = 67/207 (32%), Positives = 108/207 (52%) Frame = +3 Query: 96 LVAGVMPNAFTYSIMINGLCKMNMLDSAKEVLCEMKTSGHTPTAYVYNPFLESLCKDGNL 275 L G N F +I++ GLC+ + A ++ EM +P YN + LCK L Sbjct: 136 LKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKL 195 Query: 276 EQAMNLLGEMKDANCKPDVVSFNILINGMLNDGNLQTAKELLEDMVQSGLNPDIVTYSTI 455 ++A+ LL EM+ A C P+ V+ L++G+ DG + A ELLE M + G + D+V Y T+ Sbjct: 196 KEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTL 255 Query: 456 IDRYSKIGQLNEAMTFFNYMIARGFAPDAIVCDSLIKGFGARGQRKEVIDLLHQMAAKGV 635 I + G L+ F+ M+ +G + + + L+ G GQ KE +L+ MA G+ Sbjct: 256 ISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGI 315 Query: 636 VLDVNIVSTILDCLCRDGESPDFLKLL 716 DV + ++D LC+DG + + LL Sbjct: 316 HPDVVTYTGLIDGLCKDGRATHAMDLL 342 Score = 119 bits (299), Expect = 5e-25 Identities = 66/236 (27%), Positives = 121/236 (51%), Gaps = 2/236 (0%) Frame = +3 Query: 12 NVVTFNLLIGGFLKARNVSKAREIWQDTLVAGVMPNAFTYSIMINGLCKMNMLDSAKEVL 191 +VV + LI GF N+ + +E++ + L G+ N TYS +++GLC++ A VL Sbjct: 248 DVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVL 307 Query: 192 CEMKTSGHTPTAYVYNPFLESLCKDGNLEQAMNLLGEMKDANCKPDVVSFNILINGMLND 371 M G P Y ++ LCKDG AM+LL M + +P V++N+L++G+ + Sbjct: 308 NAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKE 367 Query: 372 GNLQTAKELLEDMVQSGLNPDIVTYSTIIDRYSKIGQLNEAMTFFNYMI--ARGFAPDAI 545 G + A ++L M++ G D+VTY+T++ G+++EA+ FN M P+ Sbjct: 368 GLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVF 427 Query: 546 VCDSLIKGFGARGQRKEVIDLLHQMAAKGVVLDVNIVSTILDCLCRDGESPDFLKL 713 + LI G G+ + + + +M KG ++ + +L + G+ + ++L Sbjct: 428 TFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMEL 483 >ref|XP_002313262.1| predicted protein [Populus trichocarpa] gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa] Length = 559 Score = 243 bits (620), Expect = 3e-62 Identities = 122/243 (50%), Positives = 169/243 (69%) Frame = +3 Query: 12 NVVTFNLLIGGFLKARNVSKAREIWQDTLVAGVMPNAFTYSIMINGLCKMNMLDSAKEVL 191 N+ T ++LIG ++K+ + KA E+W+ G++P++ TYS+MI+G CKM+ML+ AK + Sbjct: 291 NLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLF 350 Query: 192 CEMKTSGHTPTAYVYNPFLESLCKDGNLEQAMNLLGEMKDANCKPDVVSFNILINGMLND 371 MK SG +PT + YN + SLCK+ +LEQA L EMK++NC+PD +SFNI+I+G L Sbjct: 351 SRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKA 410 Query: 372 GNLQTAKELLEDMVQSGLNPDIVTYSTIIDRYSKIGQLNEAMTFFNYMIARGFAPDAIVC 551 G++ +AKELL DM Q GL PD TYS+ I+R SK+GQ+ EA F+ MIA G PD V Sbjct: 411 GDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVY 470 Query: 552 DSLIKGFGARGQRKEVIDLLHQMAAKGVVLDVNIVSTILDCLCRDGESPDFLKLLPTFSS 731 DSLIKGFG + +EVI+LL QMA GV+LD+ I ++IL LC E ++LLP FSS Sbjct: 471 DSLIKGFGLNDEIEEVINLLRQMADMGVILDLEITNSILTFLCNSAEHLHVMELLPNFSS 530 Query: 732 EAS 740 E+S Sbjct: 531 ESS 533 Score = 136 bits (342), Expect = 5e-30 Identities = 69/205 (33%), Positives = 115/205 (56%) Frame = +3 Query: 108 VMPNAFTYSIMINGLCKMNMLDSAKEVLCEMKTSGHTPTAYVYNPFLESLCKDGNLEQAM 287 ++P+ +Y+ +INGLCK L+ A ++L EM+ S P ++ Y ++ LCK+G +E+AM Sbjct: 6 ILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAM 65 Query: 288 NLLGEMKDANCKPDVVSFNILINGMLNDGNLQTAKELLEDMVQSGLNPDIVTYSTIIDRY 467 LLGEMK + DVV ++ LI+G + G L K L ++M++ G++P++V YS +I+ + Sbjct: 66 RLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGF 125 Query: 468 SKIGQLNEAMTFFNYMIARGFAPDAIVCDSLIKGFGARGQRKEVIDLLHQMAAKGVVLDV 647 K G EA + M RG PD +I G G+ ++ +DL M KG Sbjct: 126 CKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPST 185 Query: 648 NIVSTILDCLCRDGESPDFLKLLPT 722 + +++ LC++G D K+ T Sbjct: 186 VTYNVLINGLCKEGCIGDAFKIFET 210 Score = 130 bits (328), Expect = 2e-28 Identities = 71/245 (28%), Positives = 124/245 (50%) Frame = +3 Query: 6 LCNVVTFNLLIGGFLKARNVSKAREIWQDTLVAGVMPNAFTYSIMINGLCKMNMLDSAKE 185 L ++V++N +I G K + + KA ++ + + PN+FTY I+++GLCK ++ A Sbjct: 7 LPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMR 66 Query: 186 VLCEMKTSGHTPTAYVYNPFLESLCKDGNLEQAMNLLGEMKDANCKPDVVSFNILINGML 365 +L EMK G VY+ + C G L++ L EM + P+VV ++ LING Sbjct: 67 LLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFC 126 Query: 366 NDGNLQTAKELLEDMVQSGLNPDIVTYSTIIDRYSKIGQLNEAMTFFNYMIARGFAPDAI 545 G + A +L M + G+ PD+ TY+ +I K G+ +A+ F+ M +G P + Sbjct: 127 KKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTV 186 Query: 546 VCDSLIKGFGARGQRKEVIDLLHQMAAKGVVLDVNIVSTILDCLCRDGESPDFLKLLPTF 725 + LI G G + + M KG L+V +T++ LC +G+ + +KL + Sbjct: 187 TYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSL 246 Query: 726 SSEAS 740 + + Sbjct: 247 LEDGN 251 Score = 115 bits (287), Expect = 1e-23 Identities = 58/172 (33%), Positives = 98/172 (56%) Frame = +3 Query: 198 MKTSGHTPTAYVYNPFLESLCKDGNLEQAMNLLGEMKDANCKPDVVSFNILINGMLNDGN 377 MK P YN + LCK+ LE+A++LL EM+ ++C+P+ ++ IL++G+ +G Sbjct: 1 MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60 Query: 378 LQTAKELLEDMVQSGLNPDIVTYSTIIDRYSKIGQLNEAMTFFNYMIARGFAPDAIVCDS 557 ++ A LL +M + GL D+V YST+I + G L+ F+ M+ +G +P+ +V Sbjct: 61 VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSC 120 Query: 558 LIKGFGARGQRKEVIDLLHQMAAKGVVLDVNIVSTILDCLCRDGESPDFLKL 713 LI GF +G +E +LH M +G+ DV + ++ LC+DG + L L Sbjct: 121 LINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDL 172 Score = 112 bits (279), Expect = 1e-22 Identities = 66/245 (26%), Positives = 114/245 (46%), Gaps = 2/245 (0%) Frame = +3 Query: 12 NVVTFNLLIGGFLKARNVSKAREIWQDTLVAGVMPNAFTYSIMINGLCKMNMLDSAKEVL 191 N T+ +L+ G K V +A + + G+ + YS +I+G C LD K + Sbjct: 44 NSFTYCILMDGLCKEGRVEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALF 103 Query: 192 CEMKTSGHTPTAYVYNPFLESLCKDGNLEQAMNLLGEMKDANCKPDVVSFNILINGMLND 371 EM G +P VY+ + CK G +A +L M + +PDV ++ +I G+ D Sbjct: 104 DEMLEKGISPNVVVYSCLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKD 163 Query: 372 GNLQTAKELLEDMVQSGLNPDIVTYSTIIDRYSKIGQLNEAMTFFNYMIARGFAPDAIVC 551 G + A +L + M + G P VTY+ +I+ K G + +A F M+ +G + + Sbjct: 164 GRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSY 223 Query: 552 DSLIKGFGARGQRKEVIDLLHQMAAKG--VVLDVNIVSTILDCLCRDGESPDFLKLLPTF 725 ++LI G G+ E + L + G V DV +T++ LC++G +++ T Sbjct: 224 NTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTM 283 Query: 726 SSEAS 740 S Sbjct: 284 IERGS 288 Score = 90.9 bits (224), Expect = 3e-16 Identities = 60/237 (25%), Positives = 109/237 (45%), Gaps = 2/237 (0%) Frame = +3 Query: 12 NVVTFNLLIGGFLKARNVSKAREIWQDTLVAGVMPNAFTYSIMINGLCKMNMLDSAKEVL 191 + VT+N+LI G K + A +I++ L G +Y+ +I GLC LD A ++ Sbjct: 184 STVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLF 243 Query: 192 CEMKTSGH--TPTAYVYNPFLESLCKDGNLEQAMNLLGEMKDANCKPDVVSFNILINGML 365 + G+ P +N ++ LCK+G L++A+ + M + ++ + +ILI + Sbjct: 244 SSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYI 303 Query: 366 NDGNLQTAKELLEDMVQSGLNPDIVTYSTIIDRYSKIGQLNEAMTFFNYMIARGFAPDAI 545 G + A EL + + + GL P TYS +ID + K+ LN A F+ M G +P Sbjct: 304 KSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLF 363 Query: 546 VCDSLIKGFGARGQRKEVIDLLHQMAAKGVVLDVNIVSTILDCLCRDGESPDFLKLL 716 ++L+ ++ L +M D + ++D + G+ +LL Sbjct: 364 DYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELL 420 >ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] Length = 770 Score = 241 bits (615), Expect = 1e-61 Identities = 115/243 (47%), Positives = 171/243 (70%) Frame = +3 Query: 12 NVVTFNLLIGGFLKARNVSKAREIWQDTLVAGVMPNAFTYSIMINGLCKMNMLDSAKEVL 191 N+VT+N+LI G+L A ++KA E+W+D + +G+ PNA TY+++INGLCKM ML AK + Sbjct: 445 NIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLF 504 Query: 192 CEMKTSGHTPTAYVYNPFLESLCKDGNLEQAMNLLGEMKDANCKPDVVSFNILINGMLND 371 + + SG PT YN + SLC++ ++EQA NL EM++AN PDVVSFNI+I+G L Sbjct: 505 NKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKA 564 Query: 372 GNLQTAKELLEDMVQSGLNPDIVTYSTIIDRYSKIGQLNEAMTFFNYMIARGFAPDAIVC 551 G++++AKELL +M+ L PD +T+S +I+R+ K+GQL+EA + + M++ G PDA++ Sbjct: 565 GDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLF 624 Query: 552 DSLIKGFGARGQRKEVIDLLHQMAAKGVVLDVNIVSTILDCLCRDGESPDFLKLLPTFSS 731 DSL+KG+ +G+ ++V+ +L QMA K VVLD + STIL CLC + D K+LP FS Sbjct: 625 DSLLKGYSLKGKTEKVVSMLQQMADKDVVLDSKLTSTILACLCNMSKDVDIEKILPKFSQ 684 Query: 732 EAS 740 S Sbjct: 685 HTS 687 Score = 128 bits (322), Expect = 1e-27 Identities = 70/241 (29%), Positives = 127/241 (52%) Frame = +3 Query: 12 NVVTFNLLIGGFLKARNVSKAREIWQDTLVAGVMPNAFTYSIMINGLCKMNMLDSAKEVL 191 NV FNLL+ GF ++ + KA +++ ++P+ +Y+ +INGLCK L AKE+ Sbjct: 128 NVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCKGKRLVEAKELF 187 Query: 192 CEMKTSGHTPTAYVYNPFLESLCKDGNLEQAMNLLGEMKDANCKPDVVSFNILINGMLND 371 EMK P + ++ ++ CK+G++E+ LL EM+ + DV ++ LI+G + Sbjct: 188 KEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSK 247 Query: 372 GNLQTAKELLEDMVQSGLNPDIVTYSTIIDRYSKIGQLNEAMTFFNYMIARGFAPDAIVC 551 G+++ KEL +M++ + P++VTYS +++ K + EA + M PD + Sbjct: 248 GDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAY 307 Query: 552 DSLIKGFGARGQRKEVIDLLHQMAAKGVVLDVNIVSTILDCLCRDGESPDFLKLLPTFSS 731 L G G+ + I +L M +G + + I++ LC++G D L +L T + Sbjct: 308 TVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAK 367 Query: 732 E 734 + Sbjct: 368 K 368 Score = 127 bits (320), Expect = 2e-27 Identities = 69/236 (29%), Positives = 126/236 (53%), Gaps = 3/236 (1%) Frame = +3 Query: 18 VTFNLLIGGFLKARNVSKAREIWQDTLVAGVMPNAFTYSIMINGLCKMNMLDSAKEVLCE 197 V++N +I G K + + +A+E++++ PN+ T+S +I+G CK ++ +L E Sbjct: 165 VSYNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEE 224 Query: 198 MKTSGHTPTAYVYNPFLESLCKDGNLEQAMNLLGEMKDANCKPDVVSFNILINGMLNDGN 377 M+ G +VY+ + C G++E+ L EM N P+VV+++ L+N + Sbjct: 225 MEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQK 284 Query: 378 LQTAKELLEDMVQSGLNPDIVTYSTIIDRYSKIGQLNEAMTFFNYMIARGFAPDAIVCDS 557 + A ++L+ M + PD+V Y+ + D SK G+ ++A+ + M+ RG P+ + ++ Sbjct: 285 WKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNA 344 Query: 558 LIKGFGARGQRKEVIDLLHQMAAKGVVLDVNIVSTILDCLCRDG---ESPDFLKLL 716 +I G G+ + + +L MA KG DV ST++ LC G E+ D L LL Sbjct: 345 IINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLL 400 Score = 122 bits (306), Expect = 8e-26 Identities = 68/226 (30%), Positives = 120/226 (53%), Gaps = 2/226 (0%) Frame = +3 Query: 12 NVVTFNLLIGGFLKARNVSKAREIWQDTLVAGVMPNAFTYSIMINGLCKMNMLDSAKEVL 191 N VTF+ LI GF K +V + + ++ G+ + F YS +I+G C ++ KE+ Sbjct: 198 NSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELF 257 Query: 192 CEMKTSGHTPTAYVYNPFLESLCKDGNLEQAMNLLGEMKDANCKPDVVSFNILINGMLND 371 EM TP Y+ + +LCK ++A +L M +PDVV++ +L +G+ + Sbjct: 258 NEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKN 317 Query: 372 GNLQTAKELLEDMVQSGLNPDIVTYSTIIDRYSKIGQLNEAMTFFNYMIARGFAPDAIVC 551 G A ++L+ MV+ G P+ VTY+ II+ K G++++A+ M +G PD + Sbjct: 318 GRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTY 377 Query: 552 DSLIKGFGARGQRKEVIDLLHQMAAK--GVVLDVNIVSTILDCLCR 683 +L+KG G+ E +DLL+ + +K + DV + ++ LC+ Sbjct: 378 STLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCK 423 Score = 112 bits (281), Expect = 6e-23 Identities = 63/232 (27%), Positives = 110/232 (47%) Frame = +3 Query: 21 TFNLLIGGFLKARNVSKAREIWQDTLVAGVMPNAFTYSIMINGLCKMNMLDSAKEVLCEM 200 + + LI F+ + S A + + G N + +++++ G C+ A ++ C M Sbjct: 96 SLSALIESFVNTQKPSFAFGVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMM 155 Query: 201 KTSGHTPTAYVYNPFLESLCKDGNLEQAMNLLGEMKDANCKPDVVSFNILINGMLNDGNL 380 K + P YN + LCK L +A L EMK CKP+ V+F+ LI+G +G++ Sbjct: 156 KRNCLIPDCVSYNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDV 215 Query: 381 QTAKELLEDMVQSGLNPDIVTYSTIIDRYSKIGQLNEAMTFFNYMIARGFAPDAIVCDSL 560 + LLE+M + GL D+ YS +I + G + FN M+ + P+ + L Sbjct: 216 EEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCL 275 Query: 561 IKGFGARGQRKEVIDLLHQMAAKGVVLDVNIVSTILDCLCRDGESPDFLKLL 716 + + + KE +L M V DV + + D L ++G + D +K+L Sbjct: 276 MNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVL 327 Score = 102 bits (255), Expect = 6e-20 Identities = 69/237 (29%), Positives = 112/237 (47%), Gaps = 2/237 (0%) Frame = +3 Query: 12 NVVTFNLLIGGFLKARNVSKAREIWQDTLVAGVMPNAFTYSIMINGLCKMNMLDSAKEVL 191 N VT+N +I G K V A I + G P+ TYS ++ GLC + +D A ++L Sbjct: 338 NNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLL 397 Query: 192 -CEMKTSGHT-PTAYVYNPFLESLCKDGNLEQAMNLLGEMKDANCKPDVVSFNILINGML 365 M H P + +N ++ LCK L A + M + ++V++NILI+G L Sbjct: 398 NLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYL 457 Query: 366 NDGNLQTAKELLEDMVQSGLNPDIVTYSTIIDRYSKIGQLNEAMTFFNYMIARGFAPDAI 545 + G L A EL +D V SG++P+ TY+ +I+ K+ L+ A FN A G P Sbjct: 458 SAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVS 517 Query: 546 VCDSLIKGFGARGQRKEVIDLLHQMAAKGVVLDVNIVSTILDCLCRDGESPDFLKLL 716 ++L+ ++ +L +M DV + I+D + G+ +LL Sbjct: 518 EYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELL 574 Score = 96.7 bits (239), Expect = 5e-18 Identities = 65/234 (27%), Positives = 104/234 (44%) Frame = +3 Query: 27 NLLIGGFLKARNVSKAREIWQDTLVAGVMPNAFTYSIMINGLCKMNMLDSAKEVLCEMKT 206 N LI KA++ + V P + S +I A VL + Sbjct: 63 NTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFAFGVLGLIMK 122 Query: 207 SGHTPTAYVYNPFLESLCKDGNLEQAMNLLGEMKDANCKPDVVSFNILINGMLNDGNLQT 386 G Y +N L+ C+ G+ +AM+L MK PD VS+N +ING+ L Sbjct: 123 RGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCKGKRLVE 182 Query: 387 AKELLEDMVQSGLNPDIVTYSTIIDRYSKIGQLNEAMTFFNYMIARGFAPDAIVCDSLIK 566 AKEL ++M P+ VT+S +ID + K G + E M G D V +LI Sbjct: 183 AKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALIS 242 Query: 567 GFGARGQRKEVIDLLHQMAAKGVVLDVNIVSTILDCLCRDGESPDFLKLLPTFS 728 GF ++G + +L ++M K V +V S +++ LC+ + + ++L T + Sbjct: 243 GFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMT 296 Score = 70.5 bits (171), Expect = 3e-10 Identities = 51/194 (26%), Positives = 87/194 (44%) Frame = +3 Query: 111 MPNAFTYSIMINGLCKMNMLDSAKEVLCEMKTSGHTPTAYVYNPFLESLCKDGNLEQAMN 290 +P+ + + +I+ L K D V +M + P + +ES A Sbjct: 56 IPSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFAFG 115 Query: 291 LLGEMKDANCKPDVVSFNILINGMLNDGNLQTAKELLEDMVQSGLNPDIVTYSTIIDRYS 470 +LG + +V +FN+L+ G G+ A +L M ++ L PD V+Y+T+I+ Sbjct: 116 VLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLC 175 Query: 471 KIGQLNEAMTFFNYMIARGFAPDAIVCDSLIKGFGARGQRKEVIDLLHQMAAKGVVLDVN 650 K +L EA F M P+++ +LI GF G +E LL +M G+ DV Sbjct: 176 KGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVF 235 Query: 651 IVSTILDCLCRDGE 692 + S ++ C G+ Sbjct: 236 VYSALISGFCSKGD 249 >ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein At4g28010-like [Glycine max] Length = 703 Score = 240 bits (613), Expect = 2e-61 Identities = 117/242 (48%), Positives = 168/242 (69%) Frame = +3 Query: 12 NVVTFNLLIGGFLKARNVSKAREIWQDTLVAGVMPNAFTYSIMINGLCKMNMLDSAKEVL 191 N+VT+N LI G+L AR + +A ++W+ + +G PN+ TYS+MINGLCKM ML A+ + Sbjct: 431 NIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLF 490 Query: 192 CEMKTSGHTPTAYVYNPFLESLCKDGNLEQAMNLLGEMKDANCKPDVVSFNILINGMLND 371 C+MK SG PT YN + SLC++ +LEQA +L EM++ N DVVSFNI+I+G L Sbjct: 491 CKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKA 550 Query: 372 GNLQTAKELLEDMVQSGLNPDIVTYSTIIDRYSKIGQLNEAMTFFNYMIARGFAPDAIVC 551 G++++AKELL +M L PD VT+S +I+R+SK+G L+EAM + M++ G P +V Sbjct: 551 GDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVF 610 Query: 552 DSLIKGFGARGQRKEVIDLLHQMAAKGVVLDVNIVSTILDCLCRDGESPDFLKLLPTFSS 731 DSL+KG+G +G+ +++I LLHQMA K VVLD + STIL CLC + D K+LP FS Sbjct: 611 DSLLKGYGLKGETEKIISLLHQMADKDVVLDSKLTSTILACLCHMSRNLDVEKILPKFSQ 670 Query: 732 EA 737 ++ Sbjct: 671 QS 672 Score = 124 bits (312), Expect = 2e-26 Identities = 69/237 (29%), Positives = 121/237 (51%), Gaps = 4/237 (1%) Frame = +3 Query: 18 VTFNLLIGGFLKARNVSKAREIWQDTLVAG-VMPNAFTYSIMINGLCKMNMLDSAKEVLC 194 VT+N L+ GF KA+ +++AR +++ G PN TYS++I+ CK + +L Sbjct: 150 VTYNTLVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLE 209 Query: 195 EMKTSGHTPTAYVYNPFLESLCKDGNLEQAMNLLGEMKDANCKPDVVSFNILINGMLNDG 374 EM+ G +VY+ + + C +G++E L EM P+VV+++ L+ G+ G Sbjct: 210 EMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTG 269 Query: 375 NLQTAKELLEDMVQSGLNPDIVTYSTIIDRYSKIGQLNEAMTFFNYMIARGFAPDAIVCD 554 + A E+L+DM G+ PD+V Y+ + D K G+ +A+ + M+ +G P + + Sbjct: 270 RWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYN 329 Query: 555 SLIKGFGARGQRKEVIDLLHQMAAKGVVLDVNIVSTILDCLCRDG---ESPDFLKLL 716 ++ G + + ++ M KG D +T+L LC G E+ D KLL Sbjct: 330 VVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLL 386 Score = 110 bits (274), Expect = 4e-22 Identities = 62/235 (26%), Positives = 114/235 (48%), Gaps = 3/235 (1%) Frame = +3 Query: 21 TFNLLIGGFLKARNVSKAREIWQDTLVAGVMPNAFTYSIMINGLCKMNMLDSAKEVLCEM 200 + + L F+ + S A + G N + ++++ G C+ D A + +M Sbjct: 79 SLSALTESFVNTHHPSFAFSVLSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQM 138 Query: 201 KTSGH--TPTAYVYNPFLESLCKDGNLEQAMNLLGEM-KDANCKPDVVSFNILINGMLND 371 K + P YN + CK L +A L M K +C+P++V++++LI+ Sbjct: 139 KRNYDCVVPDCVTYNTLVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKS 198 Query: 372 GNLQTAKELLEDMVQSGLNPDIVTYSTIIDRYSKIGQLNEAMTFFNYMIARGFAPDAIVC 551 G + LLE+M + GL D+ YS++I + G + F+ M+ R +P+ + Sbjct: 199 GEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTY 258 Query: 552 DSLIKGFGARGQRKEVIDLLHQMAAKGVVLDVNIVSTILDCLCRDGESPDFLKLL 716 L++G G G+ +E ++L M A+GV DV + + D LC++G + D +K+L Sbjct: 259 SCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVL 313 Score = 85.5 bits (210), Expect = 1e-14 Identities = 58/235 (24%), Positives = 109/235 (46%), Gaps = 2/235 (0%) Frame = +3 Query: 18 VTFNLLIGGFLKARNVSKAREIWQDTLVAGVMPNAFTYSIMINGLCKMNMLDSAKEV--L 191 +T+N+++ G K + A + + + G P+A TY+ ++ GLC + A ++ L Sbjct: 326 LTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKL 385 Query: 192 CEMKTSGHTPTAYVYNPFLESLCKDGNLEQAMNLLGEMKDANCKPDVVSFNILINGMLND 371 + P + N ++ LCK+G + A + M + + ++V++N LI G L Sbjct: 386 LLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAA 445 Query: 372 GNLQTAKELLEDMVQSGLNPDIVTYSTIIDRYSKIGQLNEAMTFFNYMIARGFAPDAIVC 551 L A +L + V+SG +P+ +TYS +I+ K+ L+ A F M G P I Sbjct: 446 RKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDY 505 Query: 552 DSLIKGFGARGQRKEVIDLLHQMAAKGVVLDVNIVSTILDCLCRDGESPDFLKLL 716 ++L+ ++ L +M +DV + I+D + G+ +LL Sbjct: 506 NALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELL 560