BLASTX nr result
ID: Coptis23_contig00014248
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00014248
(1518 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004163582.1| PREDICTED: protein BREAST CANCER SUSCEPTIBIL... 375 e-101
ref|XP_004151994.1| PREDICTED: protein BREAST CANCER SUSCEPTIBIL... 374 e-101
ref|XP_003625346.1| PHD finger protein 11-like protein [Medicago... 355 2e-95
ref|XP_003520608.1| PREDICTED: protein BREAST CANCER SUSCEPTIBIL... 342 2e-91
ref|XP_002889488.1| ATBARD1/BARD1 [Arabidopsis lyrata subsp. lyr... 327 5e-87
>ref|XP_004163582.1| PREDICTED: protein BREAST CANCER SUSCEPTIBILITY 1 homolog [Cucumis
sativus]
Length = 679
Score = 375 bits (962), Expect = e-101
Identities = 204/533 (38%), Positives = 296/533 (55%), Gaps = 52/533 (9%)
Frame = -3
Query: 1444 SGSYSHVVNFWMLHFQKMGLELKCSLCLNMLNKPMLLPCDHMFCSTCIPNSTELGSDCPI 1265
S + + +N W+LHFQKMGLELKC LCLN + P+LLPC+H+FC +C+P + ++GS CP+
Sbjct: 7 SANTTRFLNPWLLHFQKMGLELKCPLCLNFFDDPILLPCNHLFCKSCMPFAAQIGSVCPL 66
Query: 1264 CYRHYTDKDMRRPSYMENILSIYKSMEATLGTSFFQTSLLQSDITGLQKNGDQNQELNS- 1088
C + D+DMR +M+ ++SIY+S++AT T+ + L+ +D+ + Q ++
Sbjct: 67 CKAGFVDRDMRPAPFMDKMVSIYRSLDATFSTNM--SKLVSTDVGAAVEQSRFGQSVSYV 124
Query: 1087 -----------------------------------------SQLAQASPCSPPSFGETKD 1031
SQ Q S SPPSFG+ K
Sbjct: 125 ANNCKEFEGCSMPVDSKRQHLGIEGRKGEHGRHEDCVMPPVSQTDQLSSGSPPSFGDGKV 184
Query: 1030 SDDDHSDRSGERSAKRSPAEGTVKKEYEVGKRAKLCGRPNSAVEDQARNTKRQKLDFELR 851
SDD + G S S + + + C S E R+ KRQKL++
Sbjct: 185 SDDSSDEYRGHGSKNTSDWISVITSADDKKLQLSKCTSSASEEEGHLRDLKRQKLNYGQL 244
Query: 850 DMAPTSGI----------NDQSNNLDAENKLEIPPFDAQPRTSYNLCEDPVFTCGFCQSS 701
+S N +++N E+K ++ + P + C FCQSS
Sbjct: 245 KFRISSADQTHPPVSEPGNSETSNSGMEHKSQVTNASSMPLADADDTIVRNVKCAFCQSS 304
Query: 700 IVSEVSGPMVHYLKGKPVEGDKLTQPXXXXXXXXXRCVDWAPQVFFKEGTDNLVNLDAEL 521
V+E +G ++HY+ G+ V+G + P CV+WAPQ +F+ D++ NL AE+
Sbjct: 305 KVTEDTGAVLHYMNGRLVDGVEAASPNVIHVHKL--CVEWAPQAYFQG--DDVHNLKAEV 360
Query: 520 ARAAKLKCSKCRVKGAALGCFIGSCKKTYHVPCAVYIDDCRWDAEDGLMLCPTHSLQKFP 341
AR +KLKCSKC +KGAALGC++ SC+K+YHVPCA+ ID+CRWD ++ L+LCP+H+ +FP
Sbjct: 361 ARGSKLKCSKCGLKGAALGCYLRSCQKSYHVPCALEIDECRWDMDNFLVLCPSHTSARFP 420
Query: 340 RERSTSEKKHGNNYHSTTKIAIQQPDKVWAASPGTTKEWVICGSSLSSAEKNFLAKFAKL 161
ERS K + + ++ + Q+ WA++ +W CGS+LS+ E+N L KFAKL
Sbjct: 421 DERSKPRKNNFDVFNIVSS-RNQKDLSNWASASDGVNKWTFCGSALSAEERNILVKFAKL 479
Query: 160 TGATVSKDWNPKVTHVIAQTDEKGAFSRTLKALMAILNGSWILKIDWIKACME 2
TGATVSK W P VTHVIA TDE GA +RT K LM ILNG WIL +DW+K CM+
Sbjct: 480 TGATVSKLWKPDVTHVIASTDENGACTRTYKVLMGILNGIWILNMDWVKDCMK 532
>ref|XP_004151994.1| PREDICTED: protein BREAST CANCER SUSCEPTIBILITY 1 homolog [Cucumis
sativus]
Length = 679
Score = 374 bits (959), Expect = e-101
Identities = 203/526 (38%), Positives = 293/526 (55%), Gaps = 52/526 (9%)
Frame = -3
Query: 1423 VNFWMLHFQKMGLELKCSLCLNMLNKPMLLPCDHMFCSTCIPNSTELGSDCPICYRHYTD 1244
+N W+LHFQKMGLELKC LCLN + P+LLPC+H+FC +C+P + ++GS CP+C + D
Sbjct: 14 LNPWLLHFQKMGLELKCPLCLNFFDDPILLPCNHLFCKSCMPFAAQIGSVCPLCKAGFVD 73
Query: 1243 KDMRRPSYMENILSIYKSMEATLGTSFFQTSLLQSDITGLQKNGDQNQELNS-------- 1088
+DMR +M+ ++SIY+S++AT T+ + L+ +D+ + Q ++
Sbjct: 74 RDMRPAPFMDKMVSIYRSLDATFSTNM--SKLVSTDVGAAVEQSRFGQSVSYVANNCKEF 131
Query: 1087 ----------------------------------SQLAQASPCSPPSFGETKDSDDDHSD 1010
SQ Q S SPPSFG+ K SDD +
Sbjct: 132 EGCSMPVDSKRQHLGIEGRKGEHGRHEDCVMPPVSQTDQLSSGSPPSFGDGKVSDDSSDE 191
Query: 1009 RSGERSAKRSPAEGTVKKEYEVGKRAKLCGRPNSAVEDQARNTKRQKLDFELRDMAPTSG 830
G S S + + + C S E R+ KRQKL++ +S
Sbjct: 192 YRGHGSKNTSDWISVITSADDKKLQLSKCTSSASEEEGHLRDLKRQKLNYGQLKFRISSA 251
Query: 829 I----------NDQSNNLDAENKLEIPPFDAQPRTSYNLCEDPVFTCGFCQSSIVSEVSG 680
N +++N E+K ++ + P + C FCQSS V+E +G
Sbjct: 252 DQTHPPVSEPGNSETSNSGMEHKSQVTNASSMPLADADDTIVRNVKCAFCQSSKVTEDTG 311
Query: 679 PMVHYLKGKPVEGDKLTQPXXXXXXXXXRCVDWAPQVFFKEGTDNLVNLDAELARAAKLK 500
++HY+ G+ V+G + P CV+WAPQ +F+ D++ NL AE+AR +KLK
Sbjct: 312 AVLHYMNGRLVDGVEAASPNVIHVHKL--CVEWAPQAYFQG--DDVHNLKAEVARGSKLK 367
Query: 499 CSKCRVKGAALGCFIGSCKKTYHVPCAVYIDDCRWDAEDGLMLCPTHSLQKFPRERSTSE 320
CSKC +KGAALGC++ SC+K+YHVPCA+ ID+CRWD ++ L+LCP+H+ +FP ERS
Sbjct: 368 CSKCGLKGAALGCYLRSCQKSYHVPCALEIDECRWDMDNFLVLCPSHTSARFPDERSKPR 427
Query: 319 KKHGNNYHSTTKIAIQQPDKVWAASPGTTKEWVICGSSLSSAEKNFLAKFAKLTGATVSK 140
K + + ++ + Q+ WA++ +W CGS+LS+ E+N L KFAKLTGATVSK
Sbjct: 428 KNNFDVFNIVSS-RNQKDLSNWASASDGVNKWTFCGSALSAEERNILVKFAKLTGATVSK 486
Query: 139 DWNPKVTHVIAQTDEKGAFSRTLKALMAILNGSWILKIDWIKACME 2
W P VTHVIA TDE GA +RT K LM ILNG WIL +DW+K CM+
Sbjct: 487 LWKPDVTHVIASTDENGACTRTYKVLMGILNGIWILNMDWVKDCMK 532
>ref|XP_003625346.1| PHD finger protein 11-like protein [Medicago truncatula]
gi|355500361|gb|AES81564.1| PHD finger protein 11-like
protein [Medicago truncatula]
Length = 687
Score = 355 bits (911), Expect = 2e-95
Identities = 216/556 (38%), Positives = 297/556 (53%), Gaps = 81/556 (14%)
Frame = -3
Query: 1426 VVNFWMLHFQKMGLELKCSLCLNMLNKPMLLPCDHMFCSTCIPNSTELGSDCPICYRHYT 1247
++N WMLHFQK+ LELKC LCLN+ KP+LLPC+H+FCS+C+ +ST + S+C +C +
Sbjct: 15 LLNPWMLHFQKLALELKCPLCLNLFKKPVLLPCNHLFCSSCLADSTSIRSECALCNTKCS 74
Query: 1246 DKDMRRPSYMENILSIYKSMEATLGTSFFQ------------------------------ 1157
KD+R ++E+I++IYKS++AT + FQ
Sbjct: 75 QKDIRHLPFVESIVTIYKSLDATFCANAFQQRSSDNTRVLEQCQTLHNSAFSNKVDKVLQ 134
Query: 1156 TSLLQSDI-------TGLQKNG------------------DQNQELNSSQLAQASPCSPP 1052
S + +++ +G++ NG ++ +N +Q Q+ P SPP
Sbjct: 135 NSCMSNEVGVGKNHQSGIKMNGKAKEVEMSCKRGADNHIAEKPDSMNLNQATQSEPDSPP 194
Query: 1051 SFGETKDSDDDHSDRSGERSAKRSPAEGTVKKEYEVGKRAKLCGR--------PNSAVED 896
F +TK SD+ SD + E+ +E + K + L R S ED
Sbjct: 195 -FCDTKGSDNGCSDLNSEKPLSLGRSESSSFKRSSTTGKGNLKERMPHFWSESSASENED 253
Query: 895 QARNTKRQKLDFELRDMAPTSGINDQSNN-----LDAENKLEIP-------------PFD 770
R+ KRQK ++ GI QS + +D+ LEI P D
Sbjct: 254 LTRDLKRQK------NLTNEDGIVQQSTSYHNKLVDSRCDLEIKSDKDTGALVPSNAPSD 307
Query: 769 AQPRTSYNLCEDPVFTCGFCQSSIVSEVSGPMVHYLKGKPVEGDKLTQPXXXXXXXXXRC 590
P TS C FCQSS +SE +G M+HY G V G+ +P C
Sbjct: 308 LYPSTSI---------CSFCQSSKISEATGSMLHYASGISVTGEAAMEPNVVHVHKV--C 356
Query: 589 VDWAPQVFFKEGTDNLVNLDAELARAAKLKCSKCRVKGAALGCFIGSCKKTYHVPCAVYI 410
+DWAPQV+F T + NL AE+AR AKLKC+KC KGAALGC++ SC++TYHVPCA+ I
Sbjct: 357 IDWAPQVYFVGET--VKNLKAEVARGAKLKCTKCGKKGAALGCYVKSCRRTYHVPCAMDI 414
Query: 409 DDCRWDAEDGLMLCPTHSLQKFPRERSTSEKKHGNNYHSTTKIAIQQPDKVWAASPGTTK 230
CRWD D L+LCP+HS KFP E+S +K+ + ++ + QQ +++ A G K
Sbjct: 415 SACRWDHVDYLLLCPSHSNVKFPNEKSNLDKQATQKHPVSSHLPSQQSNQLGAVQ-GDGK 473
Query: 229 EWVICGSSLSSAEKNFLAKFAKLTGATVSKDWNPKVTHVIAQTDEKGAFSRTLKALMAIL 50
+ V CGS+LS+ EK L FA GATVSK W VTHVIA TD GA SRTLK L AIL
Sbjct: 474 KMVFCGSALSNEEKVLLINFASKVGATVSKCWTSDVTHVIAATDANGACSRTLKVLRAIL 533
Query: 49 NGSWILKIDWIKACME 2
NG WILK+DWI+ACM+
Sbjct: 534 NGQWILKMDWIRACMK 549
>ref|XP_003520608.1| PREDICTED: protein BREAST CANCER SUSCEPTIBILITY 1 homolog [Glycine
max]
Length = 678
Score = 342 bits (876), Expect = 2e-91
Identities = 216/559 (38%), Positives = 288/559 (51%), Gaps = 75/559 (13%)
Frame = -3
Query: 1453 MAESGSYSHVVNFWMLHFQKMGLELKCSLCLNMLNKPMLLPCDHMFCSTCIPNSTELGSD 1274
M +SGS + ++N WMLHFQK+ LELKC LCL++ +P+LLPC+H+FC++C+ + GS+
Sbjct: 1 MDDSGSKTKLLNPWMLHFQKLALELKCPLCLSLFKRPVLLPCNHLFCNSCLADCITAGSE 60
Query: 1273 CPICYRHYTDKDMRRPSYMENIL------------SIYKSMEATLG-------------T 1169
C +C Y D+R ++EN++ S+++S + G +
Sbjct: 61 CAVCKTTYAQTDVRHIPFVENVVAIYRSLDATFCASLFQSRSSGGGRVLEPCQTILNSTS 120
Query: 1168 SFFQTSLLQSDITGLQKNG------------DQNQELNSS-------------------- 1085
S +T L ++T L + G D+ +EL S
Sbjct: 121 SSLKTGKLPRNLTNLNEVGVGQTFKSKSVVHDKAEELELSCGRGKPNPMQSSQMGLGGRE 180
Query: 1084 ----------QLAQASPCSPPSFGETKDSDDDHSDRSGERSAKRSPAEGTVKKEYEVG-- 941
Q+ Q++P SPP F +TK SD+D SD+ E E + G
Sbjct: 181 QCGVMEMDVNQVTQSAPDSPP-FCDTKGSDNDCSDQDSEHPLPPGRLENSSLNRASAGNG 239
Query: 940 ----KRAKLCGRPN-SAVEDQARNTKRQKLDFELRDMAPTSGINDQSNNLDAENKLEIPP 776
+ +L + S E AR+ KRQK NLD + + P
Sbjct: 240 NLKERMGQLRSESSVSETEGLARDLKRQK-------------------NLDFKPGKD-PG 279
Query: 775 FDAQPRTSYNLCEDPVFT-CGFCQSSIVSEVSGPMVHYLKGKPVEGDKLTQPXXXXXXXX 599
S +LC P+ C FCQSS +SEV+GPM+HY G V GD +P
Sbjct: 280 APLPTNASIDLC--PIGRICSFCQSSKISEVTGPMLHYANGNLVTGDAAMKPNVVPVHRI 337
Query: 598 XRCVDWAPQVFFKEGTDNLVNLDAELARAAKLKCSKCRVKGAALGCFIGSCKKTYHVPCA 419
C+DWAPQV+F + + NL AE+AR AKLKCSKC +KGAALGC++ SC++TYHVPCA
Sbjct: 338 --CIDWAPQVYFDG--EVVKNLKAEVARGAKLKCSKCNLKGAALGCYVKSCRRTYHVPCA 393
Query: 418 VYIDDCRWDAEDGLMLCPTHSLQKFPRERSTSEKKHGNNYHSTTKIAIQQPDKVWAASPG 239
+ I DCRWD ED L+LCP HS KFP E+ S KK H T AS
Sbjct: 394 MDISDCRWDHEDFLLLCPVHSNVKFPCEKIRS-KKQATQKHPTLSHLPSHHSNPLEASHD 452
Query: 238 TTKEWVICGSSLSSAEKNFLAKFAKLTGATVSKDWNPKVTHVIAQTDEKGAFSRTLKALM 59
+ V CGS+LS+ EK L +A GATV+K W VTHVIA TD GA SRTLK LM
Sbjct: 453 DDVKLVFCGSALSNEEKVLLINYASKVGATVTKFWTSNVTHVIAATDAHGACSRTLKVLM 512
Query: 58 AILNGSWILKIDWIKACME 2
AILNG W+LK+DWIKACME
Sbjct: 513 AILNGRWVLKMDWIKACME 531
>ref|XP_002889488.1| ATBARD1/BARD1 [Arabidopsis lyrata subsp. lyrata]
gi|297335330|gb|EFH65747.1| ATBARD1/BARD1 [Arabidopsis
lyrata subsp. lyrata]
Length = 708
Score = 327 bits (838), Expect = 5e-87
Identities = 196/562 (34%), Positives = 284/562 (50%), Gaps = 87/562 (15%)
Frame = -3
Query: 1426 VVNFWMLHFQKMGLELKCSLCLNMLNKPMLLPCDHMFCSTCIPNSTELGSDCPICYRHYT 1247
++N W+LH QK+ LEL C LCL +LN+P+LLPCDH+FC +C+ S+++ + CP+C ++
Sbjct: 8 LMNPWVLHLQKLELELNCPLCLKLLNRPVLLPCDHVFCDSCVHKSSQVETGCPVCKSKHS 67
Query: 1246 DKDMRRPSYMENILSIYKSMEATLGTSFFQTSLLQS---DITGLQKNGDQNQELNSSQLA 1076
K R +ME+++SIYKS+ A + Q + + G ++ E+ ++
Sbjct: 68 KKSRRNLQFMESVISIYKSLNAAVSVHLPQLQIPNDCNYKDDAPKHGGSEDSEMTDKDVS 127
Query: 1075 QAS-----PC---SPPSFGETKDSDDDHSDRSGER---------------SAKRSPAEGT 965
+ S C SP E D H D + E+ + +P T
Sbjct: 128 KRSGGTDSSCRDGSPLPTSEESDPRPKHQDWTAEQLRDHLLLYEFESENDAGNHTPESYT 187
Query: 964 VKKEYEV-----------GKRAKLCGRPNSAVEDQARNTKRQ-----KLDFELRDMAPTS 833
+ V R ++CG +S +++ N K Q +L LR PT
Sbjct: 188 GQTANNVRDISASEQPANAARKRICG--DSFIQESNPNPKTQDQTLLRLMESLRSDDPTD 245
Query: 832 GINDQSNN--------LDAENKLEIPPFDAQ------PRTSYNLCEDP------------ 731
+ Q + D + K +I +A P+ NL +
Sbjct: 246 YVKSQKHQPLPKSHTEQDTKRKRDITASEAMENHLKVPKREKNLMQKAADIDFNDKCSAN 305
Query: 730 -------------------VFTCGFCQSSIVSEVSGPMVHYLKGKPVEGDKLTQPXXXXX 608
+ CGFCQS++VSE +G M+HY +G+PV GD +
Sbjct: 306 SDDQLIEKISKASDKPPSNITICGFCQSAMVSEATGEMLHYSRGRPVVGDDIFHSNVIHV 365
Query: 607 XXXXRCVDWAPQVFFKEGTDNLVNLDAELARAAKLKCSKCRVKGAALGCFIGSCKKTYHV 428
C++WAPQV++ EG D + NL AELAR K+KC+KC +KGAALGC++ SC+++YHV
Sbjct: 366 HSA--CIEWAPQVYY-EG-DTVKNLKAELARGMKIKCTKCSLKGAALGCYVKSCRRSYHV 421
Query: 427 PCAVYIDDCRWDAEDGLMLCPTHSLQKFPRERSTSEKKHGNNYHSTTKIAIQQPDKVWAA 248
PCA I CRWD ED L+LCP HS KFP ++S T + +K
Sbjct: 422 PCAREISRCRWDYEDFLLLCPAHSSVKFPNDKSGHRVSRAEPLPKTNPAELCSLEK---- 477
Query: 247 SPGTTKEWVICGSSLSSAEKNFLAKFAKLTGATVSKDWNPKVTHVIAQTDEKGAFSRTLK 68
+P TKE V+CGS+LS ++KN + A AT+S+ WNP VTHVIA TDEKGA +RTLK
Sbjct: 478 TPAITKELVLCGSALSKSDKNLMESLAVKFNATISRYWNPSVTHVIASTDEKGACTRTLK 537
Query: 67 ALMAILNGSWILKIDWIKACME 2
LM ILNG WI+K DW+KA +E
Sbjct: 538 VLMGILNGKWIVKADWMKASLE 559