BLASTX nr result

ID: Coptis23_contig00014241 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014241
         (543 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ33518.1| WD-repeats transcriptional factor [Dahlia pinnata]    139   1e-63
ref|XP_004145624.1| PREDICTED: WD repeat-containing protein LWD1...   139   1e-63
ref|XP_002334240.1| predicted protein [Populus trichocarpa] gi|2...   139   1e-63
ref|XP_002301564.1| predicted protein [Populus trichocarpa] gi|2...   139   1e-63
ref|XP_003553993.1| PREDICTED: WD repeat-containing protein LWD1...   139   1e-63

>dbj|BAJ33518.1| WD-repeats transcriptional factor [Dahlia pinnata]
          Length = 369

 Score =  139 bits (351), Expect(2) = 1e-63
 Identities = 69/69 (100%), Positives = 69/69 (100%)
 Frame = +1

Query: 1   VGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKV 180
           VGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKV
Sbjct: 212 VGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKV 271

Query: 181 VVLDIRFPT 207
           VVLDIRFPT
Sbjct: 272 VVLDIRFPT 280



 Score =  129 bits (324), Expect(2) = 1e-63
 Identities = 62/64 (96%), Positives = 64/64 (100%)
 Frame = +3

Query: 285 ICTAGDDSQALIWDLSSMGQPVEGGLDPILAYTAGSEIEQLQWSSSQPDWVAIAFSSKLQ 464
           ICTAGDDSQALIWDLSSMGQPVEGGLDPILAYTAG+EIEQLQWSSSQPDWVAIAF+SKLQ
Sbjct: 306 ICTAGDDSQALIWDLSSMGQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFASKLQ 365

Query: 465 ILRV 476
           ILRV
Sbjct: 366 ILRV 369


>ref|XP_004145624.1| PREDICTED: WD repeat-containing protein LWD1-like [Cucumis sativus]
           gi|449501305|ref|XP_004161333.1| PREDICTED: WD
           repeat-containing protein LWD1-like [Cucumis sativus]
          Length = 346

 Score =  139 bits (351), Expect(2) = 1e-63
 Identities = 69/69 (100%), Positives = 69/69 (100%)
 Frame = +1

Query: 1   VGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKV 180
           VGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKV
Sbjct: 189 VGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKV 248

Query: 181 VVLDIRFPT 207
           VVLDIRFPT
Sbjct: 249 VVLDIRFPT 257



 Score =  129 bits (324), Expect(2) = 1e-63
 Identities = 62/64 (96%), Positives = 64/64 (100%)
 Frame = +3

Query: 285 ICTAGDDSQALIWDLSSMGQPVEGGLDPILAYTAGSEIEQLQWSSSQPDWVAIAFSSKLQ 464
           ICTAGDDSQALIWDLSSMGQPVEGGLDPILAYTAG+EIEQLQWSSSQPDWVAIAFS+KLQ
Sbjct: 283 ICTAGDDSQALIWDLSSMGQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQ 342

Query: 465 ILRV 476
           ILRV
Sbjct: 343 ILRV 346


>ref|XP_002334240.1| predicted protein [Populus trichocarpa]
           gi|224131364|ref|XP_002321066.1| predicted protein
           [Populus trichocarpa] gi|222861839|gb|EEE99381.1|
           predicted protein [Populus trichocarpa]
           gi|222870324|gb|EEF07455.1| predicted protein [Populus
           trichocarpa]
          Length = 346

 Score =  139 bits (351), Expect(2) = 1e-63
 Identities = 69/69 (100%), Positives = 69/69 (100%)
 Frame = +1

Query: 1   VGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKV 180
           VGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKV
Sbjct: 189 VGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKV 248

Query: 181 VVLDIRFPT 207
           VVLDIRFPT
Sbjct: 249 VVLDIRFPT 257



 Score =  129 bits (324), Expect(2) = 1e-63
 Identities = 62/64 (96%), Positives = 64/64 (100%)
 Frame = +3

Query: 285 ICTAGDDSQALIWDLSSMGQPVEGGLDPILAYTAGSEIEQLQWSSSQPDWVAIAFSSKLQ 464
           ICTAGDDSQALIWDLSSMGQPVEGGLDPILAYTAG+EIEQLQWSSSQPDWVAIAFS+KLQ
Sbjct: 283 ICTAGDDSQALIWDLSSMGQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQ 342

Query: 465 ILRV 476
           ILRV
Sbjct: 343 ILRV 346


>ref|XP_002301564.1| predicted protein [Populus trichocarpa] gi|222843290|gb|EEE80837.1|
           predicted protein [Populus trichocarpa]
          Length = 346

 Score =  139 bits (351), Expect(2) = 1e-63
 Identities = 69/69 (100%), Positives = 69/69 (100%)
 Frame = +1

Query: 1   VGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKV 180
           VGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKV
Sbjct: 189 VGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKV 248

Query: 181 VVLDIRFPT 207
           VVLDIRFPT
Sbjct: 249 VVLDIRFPT 257



 Score =  129 bits (324), Expect(2) = 1e-63
 Identities = 62/64 (96%), Positives = 64/64 (100%)
 Frame = +3

Query: 285 ICTAGDDSQALIWDLSSMGQPVEGGLDPILAYTAGSEIEQLQWSSSQPDWVAIAFSSKLQ 464
           ICTAGDDSQALIWDLSSMGQPVEGGLDPILAYTAG+EIEQLQWSSSQPDWVAIAFS+KLQ
Sbjct: 283 ICTAGDDSQALIWDLSSMGQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQ 342

Query: 465 ILRV 476
           ILRV
Sbjct: 343 ILRV 346


>ref|XP_003553993.1| PREDICTED: WD repeat-containing protein LWD1-like [Glycine max]
          Length = 344

 Score =  139 bits (351), Expect(2) = 1e-63
 Identities = 69/69 (100%), Positives = 69/69 (100%)
 Frame = +1

Query: 1   VGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKV 180
           VGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKV
Sbjct: 187 VGVFASVSADGSVRVFDLRDKEHSTIIYESSEPDTPLVRLGWNKQDPRYMATIIMDSAKV 246

Query: 181 VVLDIRFPT 207
           VVLDIRFPT
Sbjct: 247 VVLDIRFPT 255



 Score =  129 bits (324), Expect(2) = 1e-63
 Identities = 62/64 (96%), Positives = 64/64 (100%)
 Frame = +3

Query: 285 ICTAGDDSQALIWDLSSMGQPVEGGLDPILAYTAGSEIEQLQWSSSQPDWVAIAFSSKLQ 464
           ICTAGDDSQALIWDLSSMGQPVEGGLDPILAYTAG+EIEQLQWSSSQPDWVAIAFS+KLQ
Sbjct: 281 ICTAGDDSQALIWDLSSMGQPVEGGLDPILAYTAGAEIEQLQWSSSQPDWVAIAFSTKLQ 340

Query: 465 ILRV 476
           ILRV
Sbjct: 341 ILRV 344


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