BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014229
         (641 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medica...    85   1e-14
gb|ABD28730.1| Ribonuclease H [Medicago truncatula]                    79   5e-13
ref|XP_003616058.1| hypothetical protein MTR_5g075660 [Medicago ...    74   2e-11
ref|XP_003605842.1| Glycerol-3-phosphate dehydrogenase [Medicago...    73   4e-11
emb|CCA66140.1| hypothetical protein [Beta vulgaris subsp. vulga...    67   3e-09

>ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medicago truncatula]
           gi|355496705|gb|AES77908.1| Cytochrome c biogenesis
           protein ccsA [Medicago truncatula]
          Length = 666

 Score = 85.1 bits (209), Expect = 1e-14
 Identities = 59/215 (27%), Positives = 99/215 (46%), Gaps = 4/215 (1%)
 Frame = +3

Query: 3   QKLGVHMASCCRLCRQCPETHGHLFWLCCFSQKLWQWIAKAFNTSHIV----CLDDALKV 170
           +K G  + S C  C +  E+  H+F+ C  + +LW W+ K   T  ++    CL   ++ 
Sbjct: 68  RKRGCLIVSICCFCMKSAESSQHIFFECHVTSRLWDWLGKG--TDKLLDCSSCLQLLIRN 125

Query: 171 NNQWSPRLKQLWHACIVATLTSIWKQRNLVHFEGRTGNIRDCKYYIRTQVKLSGHLAKHH 350
               S  +  + ++ I+ T+ SIW +RN   F  +   +      I  +VK+S  L    
Sbjct: 126 WGSGSKLVNNILNSAIIHTIWSIWIERNQRCFHNKHQAMTTLFNIILAEVKMSFSLCMIK 185

Query: 351 NFRSQFETGVIKFWDVASKIKNAPTVKQCIWIPPAPNILKLNTDGASLGNPGPAGIGISY 530
              +  +  V K +++  K+K        IW PP  +I+K+N DG+S+G      IGI  
Sbjct: 186 GNSAMQDYKVAKLFNIPFKVKRVTPHLDIIWKPPIGDIVKINCDGSSVGRHPCGSIGIVI 245

Query: 531 RDNMGGFKLTVWKSIGVGTNFWAECMAILEGVEIA 635
           RD+   F   +  +IG  T   AE  A +  +E A
Sbjct: 246 RDSNHHFLGAISSNIGNATPLEAEFCAGMMAMEKA 280


>gb|ABD28730.1| Ribonuclease H [Medicago truncatula]
          Length = 409

 Score = 79.3 bits (194), Expect = 5e-13
 Identities = 56/213 (26%), Positives = 99/213 (46%), Gaps = 2/213 (0%)
 Frame = +3

Query: 3   QKLGVHMAS-CCRLCRQCPETHGHLFWLCCFSQKLWQWIAKAFNTSHIVCLDDALKVNNQ 179
           +K G ++ S CC  CR+  ET  H+F  C  + +LW W+ KA  T   +     L ++  
Sbjct: 103 RKRGCYIVSICCCFCRKQAETSSHIFLQCPVTLQLWDWLLKA--TDQHLDFSSILNISRM 160

Query: 180 WSPRLKQLWHACIVATLTSIWKQRNLVHFEGRTGNIRDCKYYIRTQV-KLSGHLAKHHNF 356
               ++ + ++ IV  + SIW + N  +F+G    +      I  +V +LS  L      
Sbjct: 161 ----VQHVMNSAIVHIMWSIWLECNNKYFDGVQKPMSTLFNTILAEVLRLSFMLDIVKGA 216

Query: 357 RSQFETGVIKFWDVASKIKNAPTVKQCIWIPPAPNILKLNTDGASLGNPGPAGIGISYRD 536
            S  +  + + + +  K       ++ IW+PP    +K+N DG+ +G+P    IG+ +R 
Sbjct: 217 SSMQDFKLARLFSIPFKTNRVNPCREIIWVPPHGGCMKINCDGSVVGSPSCGSIGVIFRA 276

Query: 537 NMGGFKLTVWKSIGVGTNFWAECMAILEGVEIA 635
           +   F     ++IG  T   AE  A +  +E A
Sbjct: 277 SQTMFCGAFAQNIGYATALEAEYSACMFAIEKA 309


>ref|XP_003616058.1| hypothetical protein MTR_5g075660 [Medicago truncatula]
           gi|355517393|gb|AES99016.1| hypothetical protein
           MTR_5g075660 [Medicago truncatula]
          Length = 219

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 56/200 (28%), Positives = 93/200 (46%), Gaps = 10/200 (5%)
 Frame = +3

Query: 12  GVHMASCCRLCRQCPETHGHLFWLCCFSQKLWQWIAKAFNTSHIVCLDDALKVNNQWSPR 191
           G  + S C LC +  E+  HLF  C FS++LW WI    N      + D  +V++  S R
Sbjct: 9   GCIVVSICNLCLKTDESSEHLFLRCQFSKQLWDWIGAKLNR-----VIDCSRVDSLISCR 63

Query: 192 L-------KQLWHACIVATLTSIWKQRNLVHFEGRTGNIRDCKYYIRTQVKLSGHLAKHH 350
           L         ++ A I+ TL +IW  RN + F   T  +   K  I + + +SG+++K  
Sbjct: 64  LVKCSSQVSDIFLAAILHTLHTIWWARNSLRFTTVTPTLHSTKVRIHSFIAMSGNISKGK 123

Query: 351 NFRSQFETGVIKFWD---VASKIKNAPTVKQCIWIPPAPNILKLNTDGASLGNPGPAGIG 521
              S      + F+D   V+   +    +   +W  P  + LK+NTDG+ +     A  G
Sbjct: 124 CLPSD-----LAFFDSFAVSPHCRRVKDIIMVLWKAPTTSWLKVNTDGSVISE--HAACG 176

Query: 522 ISYRDNMGGFKLTVWKSIGV 581
             +RD++  F+     +IG+
Sbjct: 177 GLFRDHLSTFRGAFSCNIGL 196


>ref|XP_003605842.1| Glycerol-3-phosphate dehydrogenase [Medicago truncatula]
           gi|355506897|gb|AES88039.1| Glycerol-3-phosphate
           dehydrogenase [Medicago truncatula]
          Length = 866

 Score = 73.2 bits (178), Expect = 4e-11
 Identities = 50/175 (28%), Positives = 80/175 (45%), Gaps = 2/175 (1%)
 Frame = +3

Query: 33  CRLCRQCPETHGHLFWLCCFSQKLWQWIAKAFNTS-HIVCLDDALKVNNQ-WSPRLKQLW 206
           C LC    E+  HLF+ C ++  LW W+A   N S H + L++   ++ + WSP+     
Sbjct: 85  CSLCMTAEESSFHLFFECSYAVHLWCWLASILNQSLHFLALEEIWSLSARGWSPQFTLAI 144

Query: 207 HACIVATLTSIWKQRNLVHFEGRTGNIRDCKYYIRTQVKLSGHLAKHHNFRSQFETGVIK 386
            + ++  L++IW  RN   F+ R  +       I   V LS   +K        E  ++K
Sbjct: 145 TSTVINILSAIWNARNTYRFKNRKIHWESVISQIIVNVSLSASNSKLSASSGIREFSILK 204

Query: 387 FWDVASKIKNAPTVKQCIWIPPAPNILKLNTDGASLGNPGPAGIGISYRDNMGGF 551
            ++V+        VK+ I  PP    +K N DGA     G A  G  +R++ G F
Sbjct: 205 AFNVSIHPLKLLIVKEVISSPPISGWIKGNCDGAFAA--GKAACGAIFRNSKGQF 257


>emb|CCA66140.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1381

 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 53/215 (24%), Positives = 90/215 (41%), Gaps = 12/215 (5%)
 Frame = +3

Query: 33   CRLCRQCPETHGHLFWLCCFSQKLWQWIAKAFNTSHIV--CLDDALKVNNQWSPR----- 191
            C LC    ET  HL   C F++ LW W    +N   +    L +A    +QW  R     
Sbjct: 1090 CILCSNSSETSDHLLLHCNFARSLWHWWFSLWNIQWVFPHTLREAF---DQWQTRSRCVF 1146

Query: 192  LKQLWHACIVATLTSIWKQRNLVHFEGRTGNIRDCKYYIRTQVK--LSGHLAKH-HNFRS 362
             K+ W       + S+WK+RN   FE    +++D +  I  ++   + G   +  ++   
Sbjct: 1147 FKKAWLTIFFIIVWSVWKERNSRIFEKSESSVKDIQDLILLRLGWWIKGWCDEFPYSPND 1206

Query: 363  QFETGVIKFWDVASKIKNAPTVKQC--IWIPPAPNILKLNTDGASLGNPGPAGIGISYRD 536
               +     W+ A+ +   P ++ C  +W PP  N LK N D ++      + +G   R+
Sbjct: 1207 VLRSPSCLIWNGANSLMQYPKLQPCPIVWTPPIENFLKWNVDASANPLLSTSAMGGVLRN 1266

Query: 537  NMGGFKLTVWKSIGVGTNFWAECMAILEGVEIAMS 641
            + G F       I       AE + I   V+I++S
Sbjct: 1267 SQGNFMCLFSSPIPFMEINCAEILGIYRAVKISIS 1301