BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014226
         (1368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]   226   1e-56
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...   174   4e-41
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]   173   1e-40
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...   165   2e-38
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...   160   6e-37

>emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]
          Length = 1290

 Score =  226 bits (575), Expect = 1e-56
 Identities = 137/377 (36%), Positives = 200/377 (53%), Gaps = 8/377 (2%)
 Frame = -1

Query: 1350 FSGLHEDILRLIAEKIDLIVDFIRFGAVCKSWRSVTLDKRHFSLFLKPLPWLMLTADDGE 1171
            +S + +D L+LIAEK+  + D++RFG VCKSW S+  DK       K  PWLML   +  
Sbjct: 922  WSKMPDDPLKLIAEKLHSVEDYVRFGGVCKSWYSIFEDKECCCPSSKS-PWLMLAEKENS 980

Query: 1170 EIRSFFSPFENKIYRLNLPKASGCHCWGSPFGWVVTVAFDHKVHMLNXXXXXXXXXXXXX 991
            EIR F+SP   K+Y + LP+  G  CWGSP+GW+VT+  D  + +LN             
Sbjct: 981  EIRGFYSPLSGKVYEIRLPEVVGKWCWGSPYGWLVTIGTDLDMCLLNPLTRVQILLPSLR 1040

Query: 990  SFND--RYFDAKSPG-KNRMSYITKAXXXXXXXXSIAEEQFLVLIIYGGCNSLAFARPGD 820
            +  +     D+ + G +++  +I KA          +     V+IIY     LAF +PG 
Sbjct: 1041 ACPNLNTLIDSSTQGSRSKDIFIYKAVLSSAP----SSPDCAVMIIYSDYGRLAFTKPGH 1096

Query: 819  ETWTPMLCHTKTVFDALYFNGQFYAVNSWGFVHLCDTYGLPSSQSTIFARPPPNVKGVDR 640
            +TWT +   +  V D +YFNG F AVN    V +CD  G  S   TI     P ++ VD 
Sbjct: 1097 QTWTLLESESGPVDDIIYFNGSFLAVNLSWEVWICDISG--SQLKTIRFAAAPALQDVDE 1154

Query: 639  F-----YILELQGELHLVVRVLDFGTDMPAIEFQHLLKTKLIEVYKCDFCTRKWEKLQNL 475
                  Y++E  GE+++V R L + T    I +   ++T    V K D C ++WE+++NL
Sbjct: 1155 IEYEAKYLVESGGEIYMVTRNL-YDTARRDIPY---MRTWTFSVLKLDMCNKRWEEVENL 1210

Query: 474  GDHAIFIGSNNSVSLKASDYPGCKPSCIYFTDDHNEASGRLVGHDMGIFNMDTVEIERLY 295
               + F+G+N+S S  ASDYP  + + IYFTDD+          DMGI+N    +IE   
Sbjct: 1211 DHCSFFLGNNHSFSTWASDYPEFRKNSIYFTDDYCGFLNIPRNFDMGIYNFQNTQIEHYP 1270

Query: 294  EGHDSLSRYSPPVWISP 244
             GHD+LS +S P+WI P
Sbjct: 1271 VGHDALSMFSAPLWIRP 1287


>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score =  174 bits (442), Expect = 4e-41
 Identities = 126/394 (31%), Positives = 187/394 (47%), Gaps = 24/394 (6%)
 Frame = -1

Query: 1350 FSGLHEDILRLIAEKIDLIVDFIRFGAVCKSWR-SVTLDKRHFSLFLKPLPWLMLTADDG 1174
            +S LH ++L  IA+K  +  D++RF AVC +WR SV     H       LPWLML     
Sbjct: 4    WSQLHPELLDFIAKKFKIYTDYVRFRAVCHNWRASVPKTPHHLPT---QLPWLMLPQSQP 60

Query: 1173 EEI-RSFFSPFENKIYRLNLPKASGCHCW-GSPFGWVVTVAFDHKVHMLNXXXXXXXXXX 1000
                R FFS   NK + L LP+AS      GS  GW++ +    ++ +LN          
Sbjct: 61   HHTHRPFFSLSLNKFHFLQLPEASHRRRRRGSSHGWLLILDEAPEIFLLNPLTRSKVHLP 120

Query: 999  XXXSFND-----------RYFDAKSPG--------KNRMSYITKAXXXXXXXXSIAEEQF 877
               +F +            Y    S G        K R S+I K               F
Sbjct: 121  PLSTFPNVVRFNFADVGREYALRTSSGDVYTRSLKKMRDSFIKKTILSSSPANG---SDF 177

Query: 876  LVLIIYGGCNSLAFARPGDETWTPMLCHTKTVFDALYFNGQFYAVNSWGFVHLCDTYGLP 697
            + ++I      LA  R  D++WT +        D ++  G FYAVN +G + +CD  G  
Sbjct: 178  IAVVILNQTGDLALCRKSDDSWTFLEDAQSYAEDVIFHRGLFYAVNKYGSIAVCDVSGSS 237

Query: 696  SSQSTIFARPPPNVKGVDRFYILELQGELHLVVRVLDFGTDMPAIEFQHLLKTKLIEVYK 517
               S I     P   G D  Y++E   EL LV R LD   D+   +   + +T   +V +
Sbjct: 238  PRVSII---EMPQQFGGDLQYLVESGEELLLVTRYLDLTYDVEPDQTSLIYRTTRFQVCR 294

Query: 516  CDFCTRKWEKLQNLGDHAIFIGSNNSVSLKASDYPGCKPSCIYFTDDHNEASGRLVG--H 343
             D    +WE + +LGD A+F+G N S+SL + D+PGCK +CIY+TDD++E +   +G   
Sbjct: 295  LDLKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSEDNYDGIGGEQ 354

Query: 342  DMGIFNMDTVEIERLYEGHDSLSRYSPPVWISPH 241
            D+GIFN++   IE L   H  + R+ PP+W++P+
Sbjct: 355  DLGIFNLEDGSIEPLPCSHFRI-RWPPPLWVTPN 387


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score =  173 bits (438), Expect = 1e-40
 Identities = 126/394 (31%), Positives = 187/394 (47%), Gaps = 24/394 (6%)
 Frame = -1

Query: 1350 FSGLHEDILRLIAEKIDLIVDFIRFGAVCKSWR-SVTLDKRHFSLFLKPLPWLMLTADDG 1174
            +S LH ++L  IA+K  +  D++RF AVC +WR SV     H       LPWLML     
Sbjct: 4    WSQLHPELLDFIAKKFKIYTDYVRFRAVCHNWRASVPKTPHHLPT---QLPWLMLPQSQP 60

Query: 1173 EEI-RSFFSPFENKIYRLNLPKASGCHCW-GSPFGWVVTVAFDHKVHMLNXXXXXXXXXX 1000
                R FFS   NK + L LP+AS      GS  GW++ +    ++ +LN          
Sbjct: 61   HHTHRPFFSLSLNKFHFLQLPEASHRRRRRGSSHGWLLILDEAPEIFLLNPLTRSKVHLP 120

Query: 999  XXXSFND-----------RYFDAKSPG--------KNRMSYITKAXXXXXXXXSIAEEQF 877
               +F +            Y    S G        K R S+I K               F
Sbjct: 121  PLSTFPNVVRFNFADVGREYALRTSSGDVYTRSLKKMRDSFIKKTILSSSPANG---SDF 177

Query: 876  LVLIIYGGCNSLAFARPGDETWTPMLCHTKTVFDALYFNGQFYAVNSWGFVHLCDTYGLP 697
            + ++I      LA  R  D++WT +        D ++  G FYAVN +G + +CD  G  
Sbjct: 178  IAVVILNQTGDLALCRKSDDSWTFLEDAQSYSEDVIFHRGLFYAVNKYGSIAVCDVSGSS 237

Query: 696  SSQSTIFARPPPNVKGVDRFYILELQGELHLVVRVLDFGTDMPAIEFQHLLKTKLIEVYK 517
               S I     P   G D  Y++E   EL LV R LD   D+   +   + +T   +V +
Sbjct: 238  PRVSII---EMPQQFGGDLQYLVESGEELLLVTRYLDLTYDVEXDQTSLIYRTTRFQVCR 294

Query: 516  CDFCTRKWEKLQNLGDHAIFIGSNNSVSLKASDYPGCKPSCIYFTDDHNEASGRLVG--H 343
             D    +WE + +LGD A+F+G N S+SL + D+PGCK +CIY+TDD++E +   +G   
Sbjct: 295  LDSKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSEDNYDGIGGEQ 354

Query: 342  DMGIFNMDTVEIERLYEGHDSLSRYSPPVWISPH 241
            D+GIFN++   IE L   H  + R+ PP+W++P+
Sbjct: 355  DLGIFNLEDGSIEPLPCSHFRI-RWPPPLWVTPN 387


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 398

 Score =  165 bits (418), Expect = 2e-38
 Identities = 122/402 (30%), Positives = 196/402 (48%), Gaps = 32/402 (7%)
 Frame = -1

Query: 1350 FSGLHEDILRLIAEKIDLIVDFIRFGAVCKSWR-SVTLDKRHFSLFLKPLPWLMLT---A 1183
            +S L  +++ +I++ + +  D++   AVC +WR S+     H       LPWLML    +
Sbjct: 5    WSQLPPELIEIISKGLTIYSDYLYSRAVCHAWRFSIPKTPNHLP---PQLPWLMLPQSQS 61

Query: 1182 DDGEEIRSFFSPFENKIYRLNLPKAS--GCHCWGSPFGWVVTVAFDHKVHMLNXXXXXXX 1009
               +  R+FFS   NK + LNLP+ S    HC GS  GW++ +     + ++N       
Sbjct: 62   QSNQSRRAFFSLSTNKFHFLNLPEVSYRKRHC-GSSHGWLMILDDTPTILLINPLTRAKL 120

Query: 1008 XXXXXXSF-NDRYFDAKSPGKN------------------RMSYITKAXXXXXXXXSIAE 886
                  SF N   F+    G+                   R S+I K          + +
Sbjct: 121  SLPPLSSFPNVISFNYSDIGREYALRNLLGERVTVSLRQMRDSFIRKVVLSSSP---LKD 177

Query: 885  EQFLVLIIYGGCNSLAFARPGDETWTPMLCHTKTVFDALYFNGQFYAVNSWGFVHLCDTY 706
              F+V+ I    + LA+ R GD++W+ +        D ++ NG FYAVN  G + +CD  
Sbjct: 178  NNFVVIAILNQTDDLAYCRNGDKSWSLVENARSFCEDVIFVNGMFYAVNKAGQIVICD-- 235

Query: 705  GLPSSQSTIFARPPPNVKGVDRFYILELQGELHLVVRVLD--FGTDMPAIEFQHLLKTKL 532
             + S    +     P   G D  Y++    EL LV R LD  +  D P +E   + +T  
Sbjct: 236  -ISSDSPRVSFMETPRQAGGDMQYLVNSGDELLLVTRYLDLEYEFDHPDMEPHLIYRTIR 294

Query: 531  IEVYKCDFCTRKWEKLQNLGDHAIFIGSNNSVSLKASDYPGCKPSCIYFTDDHNEAS--G 358
             EV++ D+   +W ++  LGD A+FIG N+S+SL A+D+ GC  +CIY+TDD+ +A+  G
Sbjct: 295  FEVFRLDWNGPQWLRMSTLGDKALFIGENSSLSLSATDFSGCMGNCIYYTDDYLDANYDG 354

Query: 357  RLVGHDMGIFNM--DTVEIERLY-EGHDSLSRYSPPVWISPH 241
                HD+GIF +  +T+E    Y     S  ++SPP+W+SP+
Sbjct: 355  HFGDHDLGIFKLCDETIEPLPCYPRNFTSPLQWSPPLWVSPN 396


>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
            predicted protein [Populus trichocarpa]
          Length = 393

 Score =  160 bits (406), Expect = 6e-37
 Identities = 123/396 (31%), Positives = 183/396 (46%), Gaps = 29/396 (7%)
 Frame = -1

Query: 1341 LHEDILRLIAEKIDLIVDFIRFGAVCKSWRS-VTLDKRHFSLFLKPLPWLMLTADDGEE- 1168
            L  +++ +I++KI +  D++ F AVC +W+S +     H       LPWL+L      + 
Sbjct: 8    LPPELIEIISKKITIYSDYLHFQAVCHAWKSSIPKTPNHLP---PQLPWLLLPQSQSNQS 64

Query: 1167 -IRSFFSPFENKIYRLNLPKASGC--HCWGSPFGWVVTVAFDHKVHMLNXXXXXXXXXXX 997
              R+FF+    K + LNLP+AS    HC GS  GW++ +     + ++N           
Sbjct: 65   SYRAFFNLSTYKFHSLNLPEASHRKKHC-GSSHGWLIILDDSPSILVINPLTRRKIHLPA 123

Query: 996  XXSF-NDRYFDAKSPGKN------------------RMSYITKAXXXXXXXXSIAEEQFL 874
              SF N   FD  + G+                   R  +I K            +  F+
Sbjct: 124  ISSFPNVVSFDYANVGREYLLVNPQGERNTASLRQMRDGFIKKVVMSSSPLEKKGDF-FV 182

Query: 873  VLIIYGGCNSLAFARPGDETWTPMLCHTKTVFDALYFNGQFYAVNSWGFVHLCDTYGLPS 694
             + I      LA+ + GDE W  +        D +YFNG FYAVN  G + +CD  G  +
Sbjct: 183  AMAILCSTGDLAYCKNGDECWNIVENSRSFSEDVIYFNGLFYAVNKAGQIVVCDVNG--N 240

Query: 693  SQSTIFARPPPNVKGVDRFYILELQGELHLVVRVLDFGTDMPAIEFQHLLKTKLIEVYKC 514
            S    F   P  + G D  Y++     L LV R LD   +        + KT   EV+K 
Sbjct: 241  SPKVSFIETPRQIGG-DMQYLVSSGDGLLLVTRYLDLDVEFDIF----IYKTARFEVFKL 295

Query: 513  DFCTRKWEKLQNLGDHAIFIGSNNSVSLKASDYPGCKPSCIYFTDDH--NEASGRLVGHD 340
            D    +WE++ +LGD  +FIG N+S++L AS   GC   CIY+TDD+  N   G +  HD
Sbjct: 296  DLNGPRWERVTSLGDMMLFIGENSSLALSASGLSGCMGDCIYYTDDYSANNYDGHIGEHD 355

Query: 339  MGIFNMDTVEIERL-YEGHDSLSR--YSPPVWISPH 241
            +GIF +    IE L     +S SR  + PP+WISP+
Sbjct: 356  LGIFKLSDGSIEPLPCYPRNSYSRLQWPPPLWISPN 391