BLASTX nr result
ID: Coptis23_contig00014207
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00014207
(1952 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002275400.2| PREDICTED: zinc finger protein MAGPIE-like [... 544 e-152
emb|CBI21907.3| unnamed protein product [Vitis vinifera] 517 e-144
emb|CAN60170.1| hypothetical protein VITISV_003666 [Vitis vinifera] 493 e-137
ref|XP_002327898.1| predicted protein [Populus trichocarpa] gi|2... 474 e-131
ref|XP_003541898.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger ... 457 e-126
>ref|XP_002275400.2| PREDICTED: zinc finger protein MAGPIE-like [Vitis vinifera]
Length = 450
Score = 544 bits (1402), Expect = e-152
Identities = 285/461 (61%), Positives = 334/461 (72%), Gaps = 5/461 (1%)
Frame = -3
Query: 1725 MDGETITNAFTIDAQVHLGINPPNIVKKKRNLPGTPDPDAEVIALSPTTLMATNRFLCEI 1546
M E I N F Q +G + P +KKKRNLPGTPDP+AEVIALSP TLMATNRFLCEI
Sbjct: 1 MAAEAIPNGFI---QNPIGGSNPPTIKKKRNLPGTPDPEAEVIALSPKTLMATNRFLCEI 57
Query: 1545 CGKGFQRDQNLQLHRRGHNVPWKLRQRSSEEPKKRVYVCPEKTCVHHQPIRALGDLTGIK 1366
CGKGFQRDQNLQLHRRGHN+PWKL+QRSS+EP+KRVYVCPEKTCVHH P RALGDLTGIK
Sbjct: 58 CGKGFQRDQNLQLHRRGHNLPWKLKQRSSKEPRKRVYVCPEKTCVHHHPSRALGDLTGIK 117
Query: 1365 KHFCRKHGEKKWKCVKCQKRYAVQSDWKAHLKTCGTREYKCDCGTIFSRRDSFLTHRAFC 1186
KHFCRKHGEKKWKC KC KRYAVQSDWKAH KTCGTREYKCDCGT+FSRRDSF+THRAFC
Sbjct: 118 KHFCRKHGEKKWKCEKCSKRYAVQSDWKAHTKTCGTREYKCDCGTLFSRRDSFITHRAFC 177
Query: 1185 DXXXXXXXXXXXTSNISSTVTTGNIDYHIMGTAVEPNMVQNFSSFPKPILSNNEAISQPR 1006
D SNI++ G I+YH MGT++ P+M Q+FSS KPI SN+EA Q R
Sbjct: 178 DALAEETARVTAASNINN----GTINYHFMGTSLAPSMPQHFSSIFKPISSNDEATDQTR 233
Query: 1005 PGCALWMVQGSQVSETTGKNL-SLSNTIGSLSFGTMYGDPYISCLNDQQADNRFDW-FGS 832
G +LWM QGSQ ET G NL + S+S G++Y DP +SC N + + W FGS
Sbjct: 234 RGLSLWMGQGSQGHETMGTNLQEIHQLRSSMSPGSVYADPLVSCSNPPPSSYQLSWVFGS 293
Query: 831 KLSTISTGE--LTSTSLPLSSIKEVTTSQLASIPSLYSTQKLVQQPSRADMSATALLQKA 658
K S+ +T + +STSLPLS++KE SQ+ S+PSLYS+Q Q +MSATALLQKA
Sbjct: 294 KQSSNNTEDQLTSSTSLPLSNVKEAAGSQIVSVPSLYSSQHHSHQTPLGNMSATALLQKA 353
Query: 657 AQMGATSSSPLLLNFGVKYNSN-AYDRNKYSESLTPNPKLNTLATNVEKSKNDISATNLW 481
AQMGATS+ P L +FG+K +S+ D NK+ T N L TN ++ D+S N
Sbjct: 354 AQMGATSADPFLGSFGLKCDSSLVQDGNKFCGLYT----ANQLPTNDMENPKDLSTFNQL 409
Query: 480 QMYPSKRRNIQMDDAKEGQTRDFLGVGGQTTVSASSINGYI 358
QMYP+KRRN Q DD+ GQTRDFLGVG QT SSING++
Sbjct: 410 QMYPAKRRNTQNDDSTGGQTRDFLGVGVQTICHPSSINGWM 450
>emb|CBI21907.3| unnamed protein product [Vitis vinifera]
Length = 427
Score = 517 bits (1331), Expect = e-144
Identities = 277/461 (60%), Positives = 320/461 (69%), Gaps = 1/461 (0%)
Frame = -3
Query: 1737 MLKKMDGETITNAFTIDAQVHLGINPPNIVKKKRNLPGTPDPDAEVIALSPTTLMATNRF 1558
ML+KM E I N F Q +G + P +KKKRNLPGTPDP+AEVIALSP TLMATNRF
Sbjct: 1 MLQKMAAEAIPNGFI---QNPIGGSNPPTIKKKRNLPGTPDPEAEVIALSPKTLMATNRF 57
Query: 1557 LCEICGKGFQRDQNLQLHRRGHNVPWKLRQRSSEEPKKRVYVCPEKTCVHHQPIRALGDL 1378
LCEICGKGFQRDQNLQLHRRGHN+PWKL+QRSS+EP+KRVYVCPEKTCVHH P RALGDL
Sbjct: 58 LCEICGKGFQRDQNLQLHRRGHNLPWKLKQRSSKEPRKRVYVCPEKTCVHHHPSRALGDL 117
Query: 1377 TGIKKHFCRKHGEKKWKCVKCQKRYAVQSDWKAHLKTCGTREYKCDCGTIFSRRDSFLTH 1198
TGIKKHFCRKHGEKKWKC KC KRYAVQSDWKAH KTCGTREYKCDCGT+FSRRDSF+TH
Sbjct: 118 TGIKKHFCRKHGEKKWKCEKCSKRYAVQSDWKAHTKTCGTREYKCDCGTLFSRRDSFITH 177
Query: 1197 RAFCDXXXXXXXXXXXTSNISSTVTTGNIDYHIMGTAVEPNMVQNFSSFPKPILSNNEAI 1018
RAFCD SNI++ G I+YH MGT++ P+M Q+FSS KPI SN+EA
Sbjct: 178 RAFCDALAEETARVTAASNINN----GTINYHFMGTSLAPSMPQHFSSIFKPISSNDEAT 233
Query: 1017 SQPRPGCALWMVQGSQVSETTGKNLSLSNTIGSLSFGTMYGDPYISCLNDQQADNRFDWF 838
Q R G +LWM QGSQ ET G NL + + S S ++N D
Sbjct: 234 DQTRRGLSLWMGQGSQGHETMGTNLQEIHQLRS------------SMSPGSSSNNTEDQL 281
Query: 837 GSKLSTISTGELTSTSLPLSSIKEVTTSQLASIPSLYSTQKLVQQPSRADMSATALLQKA 658
S STSLPLS++KE SQ+ S+PSLYS+Q Q +MSATALLQKA
Sbjct: 282 TS-----------STSLPLSNVKEAAGSQIVSVPSLYSSQHHSHQTPLGNMSATALLQKA 330
Query: 657 AQMGATSSSPLLLNFGVKYNSN-AYDRNKYSESLTPNPKLNTLATNVEKSKNDISATNLW 481
AQMGATS+ P L +FG+K +S+ D NK+ T N L TN ++ D+S N
Sbjct: 331 AQMGATSADPFLGSFGLKCDSSLVQDGNKFCGLYT----ANQLPTNDMENPKDLSTFNQL 386
Query: 480 QMYPSKRRNIQMDDAKEGQTRDFLGVGGQTTVSASSINGYI 358
QMYP+KRRN Q DD+ GQTRDFLGVG QT SSING++
Sbjct: 387 QMYPAKRRNTQNDDSTGGQTRDFLGVGVQTICHPSSINGWM 427
>emb|CAN60170.1| hypothetical protein VITISV_003666 [Vitis vinifera]
Length = 403
Score = 493 bits (1270), Expect = e-137
Identities = 255/411 (62%), Positives = 300/411 (72%), Gaps = 5/411 (1%)
Frame = -3
Query: 1575 MATNRFLCEICGKGFQRDQNLQLHRRGHNVPWKLRQRSSEEPKKRVYVCPEKTCVHHQPI 1396
MATNRFLCEICGKGFQRDQNLQLHRRGHN+PWKL+QRSS+EP+KRVYVCPEKTCVHH P
Sbjct: 1 MATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQRSSKEPRKRVYVCPEKTCVHHHPS 60
Query: 1395 RALGDLTGIKKHFCRKHGEKKWKCVKCQKRYAVQSDWKAHLKTCGTREYKCDCGTIFSRR 1216
RALGDLTGIKKHFCRKHGEKKWKC KC KRYAVQSDWKAH KTCGTREYKCDCGT+FSRR
Sbjct: 61 RALGDLTGIKKHFCRKHGEKKWKCEKCSKRYAVQSDWKAHTKTCGTREYKCDCGTLFSRR 120
Query: 1215 DSFLTHRAFCDXXXXXXXXXXXTSNISSTVTTGNIDYHIMGTAVEPNMVQNFSSFPKPIL 1036
DSF+THRAFCD SNI++ G I+YH MGT++ P+M Q+FSS KPI
Sbjct: 121 DSFITHRAFCDALAEETARVTAASNINN----GTINYHFMGTSLAPSMPQHFSSIFKPIS 176
Query: 1035 SNNEAISQPRPGCALWMVQGSQVSETTGKNL-SLSNTIGSLSFGTMYGDPYISCLNDQQA 859
SN+EA Q R G +LWM QGSQ ET G NL + S+S G++Y DP +SC N +
Sbjct: 177 SNDEATDQTRRGLSLWMGQGSQGHETMGTNLQEIHQLRSSMSPGSVYADPLVSCSNPPPS 236
Query: 858 DNRFDW-FGSKLSTISTGE--LTSTSLPLSSIKEVTTSQLASIPSLYSTQKLVQQPSRAD 688
+ W FGSK S+ +T + +STSLPLS++KE SQ+ S+PSLYS+Q Q +
Sbjct: 237 SYQLSWVFGSKQSSNNTEDQLTSSTSLPLSNVKEAAGSQIVSVPSLYSSQHHSHQTPLGN 296
Query: 687 MSATALLQKAAQMGATSSSPLLLNFGVKYNSN-AYDRNKYSESLTPNPKLNTLATNVEKS 511
MSATALLQKAAQMGATS+ P L +FG+K +S+ D NK+ T N L TN ++
Sbjct: 297 MSATALLQKAAQMGATSADPFLGSFGLKCDSSLVQDGNKFCGLYT----ANQLPTNDMEN 352
Query: 510 KNDISATNLWQMYPSKRRNIQMDDAKEGQTRDFLGVGGQTTVSASSINGYI 358
D+S N QMYP+KRRN Q DD+ GQTRDFLGVG QT SSING++
Sbjct: 353 PKDLSTFNQLQMYPAKRRNTQNDDSTGGQTRDFLGVGVQTICHPSSINGWM 403
>ref|XP_002327898.1| predicted protein [Populus trichocarpa] gi|222837307|gb|EEE75686.1|
predicted protein [Populus trichocarpa]
Length = 479
Score = 474 bits (1219), Expect = e-131
Identities = 272/463 (58%), Positives = 328/463 (70%), Gaps = 25/463 (5%)
Frame = -3
Query: 1671 GINPPNIVKKKRNLPGTPD---------PDAEVIALSPTTLMATNRFLCEICGKGFQRDQ 1519
G NPP + KKKRNLPGTP P+AEVIALSP TLMATNRFLCEICGKGFQRDQ
Sbjct: 21 GSNPPAL-KKKRNLPGTPGKLEASFYSYPEAEVIALSPKTLMATNRFLCEICGKGFQRDQ 79
Query: 1518 NLQLHRRGHNVPWKLRQRSSEEPKKRVYVCPEKTCVHHQPIRALGDLTGIKKHFCRKHGE 1339
NLQLHRRGHN+PWKL+QR+++E KKRVYVCPEKTCVHH P RALGDLTGIKKHFCRKHGE
Sbjct: 80 NLQLHRRGHNLPWKLKQRTNKEVKKRVYVCPEKTCVHHHPSRALGDLTGIKKHFCRKHGE 139
Query: 1338 KKWKCVKCQKRYAVQSDWKAHLKTCGTREYKCDCGTIFSRRDSFLTHRAFCDXXXXXXXX 1159
KKWKC KC KRYAVQSDWKAH KTCGTREYKCDCGT+FSRRDSF+THRAFCD
Sbjct: 140 KKWKCEKCSKRYAVQSDWKAHSKTCGTREYKCDCGTLFSRRDSFITHRAFCDALAEETAR 199
Query: 1158 XXXTSNISSTVTTGNIDYHIMGTAVEPNMVQNFSSFPKPILSNNEAISQPRPGCALWMVQ 979
S+I++ +T G+I+YH+MG + PNM Q+FSS KPI SN+ Q G +LWM Q
Sbjct: 200 VNAVSSINN-LTAGSINYHLMGNPLGPNMAQHFSSIFKPISSNDHQTRQ--GGVSLWMNQ 256
Query: 978 G-SQVSET-TGKNLSLSNTIGSL-SFGTMYGDPY-ISCLNDQQADN-RFDW--FGSKLST 820
G QVSE G N+ + + S S G M+GD +SC + +D+ +F+W FG+K+S+
Sbjct: 257 GVPQVSEALMGNNIQEIHQLRSANSSGAMFGDLLAVSCSHAPPSDHYQFNWPVFGNKISS 316
Query: 819 IST-GELTST-SLPLSSIKE-VTTSQLASIPSLYST-QKLVQQPSRADMSATALLQKAAQ 652
+ ELTST LPL+++KE SQLAS+PSLYST Q+ Q + A+MSATALLQKAAQ
Sbjct: 317 NNAHEELTSTLVLPLTNVKEAAAASQLASVPSLYSTQQQQSHQTTSANMSATALLQKAAQ 376
Query: 651 MGATSSSPLLL-NFGVKYNS-NAYDRNKYSESLTPNPKLNTLATNVEKSKND-ISATNLW 481
+GATS+ P L +F +K N+ D NK+ +P A++VE S +D IS+ N
Sbjct: 377 IGATSTDPSFLGSFALKSNAKKVQDGNKFCGLYGSSPVSTNPASDVENSGSDQISSLNQL 436
Query: 480 QMYPSKRRNIQ--MDDAKEGQTRDFLGVGGQTTVSASSINGYI 358
QMYP +++ Q D GQTRDFLGVG Q SSING+I
Sbjct: 437 QMYPKRQKIFQSDQDSPAGGQTRDFLGVGVQAICHPSSINGWI 479
>ref|XP_003541898.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger protein MAGPIE-like
[Glycine max]
Length = 468
Score = 457 bits (1177), Expect = e-126
Identities = 264/481 (54%), Positives = 318/481 (66%), Gaps = 25/481 (5%)
Frame = -3
Query: 1725 MDGETITNAFTI-DAQVHLGINPPNIVKKKRNLPGTPDPDAEVIALSPTTLMATNRFLCE 1549
MD I+NAF + N P +K+KRNLPG PDP+AEVI LSP TLMATNRF+CE
Sbjct: 1 MDDGEISNAFPHQNPSTAASNNQPPTLKRKRNLPGNPDPEAEVIVLSPKTLMATNRFVCE 60
Query: 1548 ICGKGFQRDQNLQLHRRGHNVPWKLRQRSSEEPKKRVYVCPEKTCVHHQPIRALGDLTGI 1369
IC KGFQRDQNLQLHRRGHN+PWKL+QR+S+E +KRVYVCPEKTCVHH P RALGDLTGI
Sbjct: 61 ICLKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKRVYVCPEKTCVHHHPSRALGDLTGI 120
Query: 1368 KKHFCRKHGEKKWKCVKCQKRYAVQSDWKAHLKTCGTREYKCDCGTIFSRRDSFLTHRAF 1189
KKHFCRKHGEKKWKC KC KRYAVQSDWKAH KTCGTREYKCDCGTIFSRRDSF+THRAF
Sbjct: 121 KKHFCRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYKCDCGTIFSRRDSFITHRAF 180
Query: 1188 CDXXXXXXXXXXXTSNISSTVTTGNIDYHIMGTAVEPNMVQNFSSFPKPILSNNEAISQP 1009
CD SNIS +Y IM + PNM FSSF KP N+ + +P
Sbjct: 181 CDALAEETARVNAASNIS--------NYSIMQNPLGPNMTTQFSSFFKP---NSCSDQEP 229
Query: 1008 RP-------GCALWMVQGSQVSETTGKNLSLS--NTIGSLS-----FGTMYGDPYISCLN 871
P G +LWM Q SQ E N +L + +GS++ +GT G+P SC N
Sbjct: 230 APGNQTSNKGLSLWMTQTSQAHEAMANNNNLHEFHQLGSVTSPTAIYGTS-GNPLASCSN 288
Query: 870 DQQADNRFDW-FGSKLSTI-STGELTST-SLPL--SSIKEVTTSQLASIPSLYSTQKLVQ 706
++ + +W FG+KLS+ S ELTST SLPL + +K+ QL S+PSLYS+Q
Sbjct: 289 PPPSNYQLNWVFGNKLSSNGSHQELTSTASLPLVNNIVKDNPNLQLISVPSLYSSQHQSH 348
Query: 705 QPSRADMSATALLQKAAQMGATSSSPLLL---NFGVKYNSNAYDRNKYSESLTPNPKLNT 535
Q S A+MSATALLQKAAQ+G TSS P L + G+K NS D NK+ + L T
Sbjct: 349 QASSANMSATALLQKAAQVGTTSSDPSSLFHGSIGLKCNSPGQDGNKFCGMYGSSSVLTT 408
Query: 534 L--ATNVEKSKNDISATNLWQMYPSKRRNIQMDDAKEGQTRDFLGVGGQTTVSASSINGY 361
+ E + N+ S +L Q+ P+KRR++Q +++ GQTRDFLGVG T SS NG+
Sbjct: 409 SHHGSEAENNNNNYSG-DLSQIPPTKRRHVQNEESAWGQTRDFLGVGVPTICHPSSTNGW 467
Query: 360 I 358
I
Sbjct: 468 I 468