BLASTX nr result

ID: Coptis23_contig00014201 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014201
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300837.1| predicted protein [Populus trichocarpa] gi|2...    91   1e-16
emb|CBI28704.3| unnamed protein product [Vitis vinifera]               91   1e-16
ref|XP_002307591.1| predicted protein [Populus trichocarpa] gi|2...    91   1e-16
ref|XP_003632332.1| PREDICTED: uncharacterized protein LOC100853...    91   1e-16
ref|XP_003578227.1| PREDICTED: uncharacterized protein LOC100845...    90   2e-16

>ref|XP_002300837.1| predicted protein [Populus trichocarpa] gi|222842563|gb|EEE80110.1|
           predicted protein [Populus trichocarpa]
          Length = 510

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 49/68 (72%), Positives = 54/68 (79%), Gaps = 8/68 (11%)
 Frame = -3

Query: 180 KAEMNSEALAFKEMLELQKKSGLES-----PMPLQRAEGHISYGGALRPGEGDAIAQY-- 22
           KAE++ EAL FKE++E QKK  LE+     PMPL RAEGHISYGGALRPGEGDAIAQY  
Sbjct: 347 KAEVDVEALMFKEIIEAQKKPALENEPVVGPMPLPRAEGHISYGGALRPGEGDAIAQYVQ 406

Query: 21  -GKRIPRR 1
            GKRIPRR
Sbjct: 407 QGKRIPRR 414


>emb|CBI28704.3| unnamed protein product [Vitis vinifera]
          Length = 469

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 48/66 (72%), Positives = 53/66 (80%), Gaps = 8/66 (12%)
 Frame = -3

Query: 174 EMNSEALAFKEMLELQKKSGLES-----PMPLQRAEGHISYGGALRPGEGDAIAQY---G 19
           E+N+EAL FKEM+E QKK  L++     PMPL RAEGHISYGGALRPGEGDAIAQY   G
Sbjct: 308 EVNAEALIFKEMIESQKKPALDNEPTVGPMPLPRAEGHISYGGALRPGEGDAIAQYVQQG 367

Query: 18  KRIPRR 1
           KRIPRR
Sbjct: 368 KRIPRR 373


>ref|XP_002307591.1| predicted protein [Populus trichocarpa] gi|222857040|gb|EEE94587.1|
           predicted protein [Populus trichocarpa]
          Length = 507

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 49/68 (72%), Positives = 53/68 (77%), Gaps = 8/68 (11%)
 Frame = -3

Query: 180 KAEMNSEALAFKEMLELQKKSGLES-----PMPLQRAEGHISYGGALRPGEGDAIAQY-- 22
           KAE + EAL FKEM+E QKK  L++     PMPL RAEGHISYGGALRPGEGDAIAQY  
Sbjct: 344 KAETDVEALMFKEMIEAQKKPALDNEPEVGPMPLPRAEGHISYGGALRPGEGDAIAQYVQ 403

Query: 21  -GKRIPRR 1
            GKRIPRR
Sbjct: 404 QGKRIPRR 411


>ref|XP_003632332.1| PREDICTED: uncharacterized protein LOC100853496 [Vitis vinifera]
          Length = 540

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 48/66 (72%), Positives = 53/66 (80%), Gaps = 8/66 (12%)
 Frame = -3

Query: 174 EMNSEALAFKEMLELQKKSGLES-----PMPLQRAEGHISYGGALRPGEGDAIAQY---G 19
           E+N+EAL FKEM+E QKK  L++     PMPL RAEGHISYGGALRPGEGDAIAQY   G
Sbjct: 379 EVNAEALIFKEMIESQKKPALDNEPTVGPMPLPRAEGHISYGGALRPGEGDAIAQYVQQG 438

Query: 18  KRIPRR 1
           KRIPRR
Sbjct: 439 KRIPRR 444


>ref|XP_003578227.1| PREDICTED: uncharacterized protein LOC100845029 [Brachypodium
           distachyon]
          Length = 520

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 48/66 (72%), Positives = 53/66 (80%), Gaps = 8/66 (12%)
 Frame = -3

Query: 174 EMNSEALAFKEMLELQKKSGLES-----PMPLQRAEGHISYGGALRPGEGDAIAQY---G 19
           E++ EA+ FKEMLE QKK+ LE+     PMPL RAEGHISYGGALRPGEGDAIAQY   G
Sbjct: 364 EIDPEAIKFKEMLEAQKKAALENEMPVGPMPLPRAEGHISYGGALRPGEGDAIAQYVQQG 423

Query: 18  KRIPRR 1
           KRIPRR
Sbjct: 424 KRIPRR 429


Top