BLASTX nr result

ID: Coptis23_contig00014199 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014199
         (2039 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273558.1| PREDICTED: uncharacterized protein LOC100268...   264   8e-68
emb|CBI27315.3| unnamed protein product [Vitis vinifera]              254   6e-65
ref|XP_002512056.1| conserved hypothetical protein [Ricinus comm...   201   6e-49
ref|XP_002312290.1| predicted protein [Populus trichocarpa] gi|2...   195   3e-47
gb|AAF98582.1|AC013427_25 This gene may be cut off [Arabidopsis ...   178   4e-42

>ref|XP_002273558.1| PREDICTED: uncharacterized protein LOC100268093 [Vitis vinifera]
          Length = 1242

 Score =  264 bits (674), Expect = 8e-68
 Identities = 160/413 (38%), Positives = 219/413 (53%), Gaps = 7/413 (1%)
 Frame = +1

Query: 820  DVKDVNPRVSGNSVYTSEKEVDVIKTSDSRMDKISTSMEMLDLRP-TSKFRGPLSESIIS 996
            D    N +   +SV  SE+ +       S+MD      ++ D+ P T K+ G LSESII 
Sbjct: 611  DTSGANTKCMVSSVQISEQSIS------SKMDGAEAGNQISDVAPLTRKYNGLLSESIIY 664

Query: 997  RNTKDGCVSEAEIS----LTTEVDQVCALVDSSTRKISLQDESKLDEQYQVLSMEICAPR 1164
            RN  D C+ +A  +    L  E+ QV +   S  +K+    E KL+ Q+  L+ E  A  
Sbjct: 665  RNFGDDCILDAYPTVGPLLAAEIHQVSSSASSPDKKVLFSPEVKLEGQHYNLNTEKIALN 724

Query: 1165 STGMISQVQAVDDHXXXXXXXXXXXXXXXXXXXXXXXXXLLFQERERSFFSNDNVHGPDK 1344
              G+   +  V                                  ++      N+   ++
Sbjct: 725  PEGVFCNMAPVSSQNQEFICTSKYDDPYIFFYPSVLRVESCQAYIDKKLVEQQNLVKLNR 784

Query: 1345 NAVDLG--FHPQLMSVTSSHQDSVNLLSHIELNQKHLLPNQHTSPKTEFNRTSDNFVELV 1518
            +    G  F    MS     Q   NL +HI++  KH L                   ELV
Sbjct: 785  SVQKGGTSFGENNMSNAEEVQAGTNLKAHIKMEVKHDLVGN---------------TELV 829

Query: 1519 GCYVQPAPILSVVLSTQGDDIHISVLCGILADRVRTIFICKVPLRDPRKGYPVFLGYTSI 1698
            GCYV P P+LSV+L+T+ D+IHI VLCG+L D+   +FI KV +++PR   P F+GYT I
Sbjct: 830  GCYVHPMPVLSVLLNTREDEIHICVLCGLLVDKDTILFIYKVTIKEPRLQSPTFVGYTPI 889

Query: 1699 MLPSSKYTFCGEIAFGKFPLQFTPDGQCLVSSNSIKAPYCRDRSIHCLCSLCTTVCFDEN 1878
            +LP+ K    GE+A  +F LQFTPDGQ LV  NSIK PYCR++ I CLCS C   CF+EN
Sbjct: 890  ILPTLKDRSGGEVALDRFGLQFTPDGQSLVLLNSIKTPYCREQKIPCLCSACKLECFEEN 949

Query: 1879 AIQIIHVKLGYVSLVAKLKTDDSVLSILVCEPSHLVALEKNGRLQVWAMNSTW 2037
            AI+I+ +KLG++S+V KLKT DSV  ILVCEP+HLVA+E++GRL VW MNSTW
Sbjct: 950  AIKIVQIKLGFLSVVEKLKTVDSVQCILVCEPNHLVAVEESGRLHVWVMNSTW 1002


>emb|CBI27315.3| unnamed protein product [Vitis vinifera]
          Length = 1177

 Score =  254 bits (649), Expect = 6e-65
 Identities = 162/406 (39%), Positives = 217/406 (53%), Gaps = 5/406 (1%)
 Frame = +1

Query: 835  NPRVSGNSVYTSEKEVDVIKTSDSRMDKISTSMEMLDLRP-TSKFRGPLSESIISRNTKD 1011
            N +   +SV  SE+ +       S+MD      ++ D+ P T K+ G LSESII RN  D
Sbjct: 587  NTKCMVSSVQISEQSIS------SKMDGAEAGNQISDVAPLTRKYNGLLSESIIYRNFGD 640

Query: 1012 GCVSEAEIS----LTTEVDQVCALVDSSTRKISLQDESKLDEQYQVLSMEICAPRSTGMI 1179
             C+ +A  +    L  E+ QV +   S  +K+    E KL+ Q+  L+ E  A       
Sbjct: 641  DCILDAYPTVGPLLAAEIHQVSSSASSPDKKVLFSPEVKLEGQHYNLNTEKIALNPE--- 697

Query: 1180 SQVQAVDDHXXXXXXXXXXXXXXXXXXXXXXXXXLLFQERERSFFSNDNVHGPDKNAVDL 1359
               QA  D                              E++     N +V    K     
Sbjct: 698  ESCQAYIDKKLV--------------------------EQQNLVKLNRSVQ---KGGTSF 728

Query: 1360 GFHPQLMSVTSSHQDSVNLLSHIELNQKHLLPNQHTSPKTEFNRTSDNFVELVGCYVQPA 1539
            G +   MS     Q   NL +HI++  KH L                   ELVGCYV P 
Sbjct: 729  GENN--MSNAEEVQAGTNLKAHIKMEVKHDLVGN---------------TELVGCYVHPM 771

Query: 1540 PILSVVLSTQGDDIHISVLCGILADRVRTIFICKVPLRDPRKGYPVFLGYTSIMLPSSKY 1719
            P+LSV+L+T+ D+IHI VLCG+L D+   +FI KV +++PR   P F+GYT I+LP+ K 
Sbjct: 772  PVLSVLLNTREDEIHICVLCGLLVDKDTILFIYKVTIKEPRLQSPTFVGYTPIILPTLKD 831

Query: 1720 TFCGEIAFGKFPLQFTPDGQCLVSSNSIKAPYCRDRSIHCLCSLCTTVCFDENAIQIIHV 1899
               GE+A  +F LQFTPDGQ LV  NSIK PYCR++ I CLCS C   CF+ENAI+I+ +
Sbjct: 832  RSGGEVALDRFGLQFTPDGQSLVLLNSIKTPYCREQKIPCLCSACKLECFEENAIKIVQI 891

Query: 1900 KLGYVSLVAKLKTDDSVLSILVCEPSHLVALEKNGRLQVWAMNSTW 2037
            KLG++S+V KLKT DSV  ILVCEP+HLVA+E++GRL VW MNSTW
Sbjct: 892  KLGFLSVVEKLKTVDSVQCILVCEPNHLVAVEESGRLHVWVMNSTW 937


>ref|XP_002512056.1| conserved hypothetical protein [Ricinus communis]
            gi|223549236|gb|EEF50725.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1246

 Score =  201 bits (511), Expect = 6e-49
 Identities = 92/187 (49%), Positives = 127/187 (67%)
 Frame = +1

Query: 1477 TEFNRTSDNFVELVGCYVQPAPILSVVLSTQGDDIHISVLCGILADRVRTIFICKVPLRD 1656
            +E     D  VE +GCY  P P+LS+++  +G++I+I VLCG+L ++ RT+F+ K+ +  
Sbjct: 750  SELTNELDGIVEFLGCYFHPMPVLSLLVRRKGNEIYICVLCGLLVEKDRTLFLYKLAIEG 809

Query: 1657 PRKGYPVFLGYTSIMLPSSKYTFCGEIAFGKFPLQFTPDGQCLVSSNSIKAPYCRDRSIH 1836
            PR G P F+G+TS+  PSS   F  EI+F +  LQ TPDGQCLV   S +AP CR+  + 
Sbjct: 810  PRIGCPCFIGHTSVTWPSSTGIFGREISFERSGLQLTPDGQCLVLLGSTRAPCCREGRLE 869

Query: 1837 CLCSLCTTVCFDENAIQIIHVKLGYVSLVAKLKTDDSVLSILVCEPSHLVALEKNGRLQV 2016
            CLCS C + CF  N ++I+ VK GYVS++ KLKT+DS+  ILVCEP HLVA  +N RL +
Sbjct: 870  CLCSACASDCFGSNGVKIVQVKAGYVSVLVKLKTNDSLQCILVCEPDHLVAAGENSRLHL 929

Query: 2017 WAMNSTW 2037
            W MNS W
Sbjct: 930  WTMNSVW 936


>ref|XP_002312290.1| predicted protein [Populus trichocarpa] gi|222852110|gb|EEE89657.1|
            predicted protein [Populus trichocarpa]
          Length = 1312

 Score =  195 bits (496), Expect = 3e-47
 Identities = 187/717 (26%), Positives = 286/717 (39%), Gaps = 39/717 (5%)
 Frame = +1

Query: 4    DSAEQDFANSMMTXXXXXXXXXXKKTSGRKRKKVRTSESSFSNGDVCLNLATTKSSEESH 183
            DSA QD A SMMT          K  S RK+K +                          
Sbjct: 448  DSAGQDIAKSMMTFLLPQAIPLLKNKS-RKKKTIG------------------------- 481

Query: 184  EMHTYNKLSSGEPKTGTCAEGSLKDREGQTHCLSTALCFESENLENIKSVIPDSLEDTSY 363
                Y+++    PK     + +L+  E Q+ C+  ++   SE+   +KSV+ DS +    
Sbjct: 482  ----YSEILPNTPKPHENNDENLQFVEAQSPCVYGSVLPGSEH---VKSVVLDSFDGDQC 534

Query: 364  QTPSGSAANKIHLKEKSENVTVNCYENSLCNEISSRVDNHLSNDQTILPGPPKDFPSSEP 543
                    N+      +      C++   C     RVD  ++ D T              
Sbjct: 535  GV---HVTNQPISPSNTAEADQPCFDTDACPPC--RVDQFVNIDGT-------------E 576

Query: 544  AFVRQADKLPIQVENTPNCAIPNLRLADDLPCSGSAYGAKVVSFTADTEHFEKVLPPTKS 723
            + V Q D   I+                D+ C         V    D  H +  L P +S
Sbjct: 577  SSVCQFDTDGIK----------------DIFCHNQVQSK--VQLALDKRHRDDYLYPYES 618

Query: 724  IEIIKKGRSNNGLIQYHRRNRSTDKKLQNSSRDVK------DVNPRVSGNSVYTSEK--- 876
            +  IK    N      +  N+   KK+  +S   K      D+N     N V T      
Sbjct: 619  VSGIKSANEN----VLYEENQDICKKMDENSIGTKFLPGEKDLNLGTDFNDVVTKSNMSQ 674

Query: 877  -----EVDV------IKTSDSRMDKISTSMEMLDL----------RPTSKFRGPLSESII 993
                  V +      +K   S    +ST+    ++            T K     SESII
Sbjct: 675  RGLGASVQILRNDISVKAETSESGNLSTAQVTKNVYTRKKVSKAASSTRKCNASFSESII 734

Query: 994  SRNTKDGCVSEAEISL-TTEVDQVCALVDSSTRKISLQDESKLDEQYQVLSMEICAPRST 1170
             RN +D  + E   +L  +E+ Q+ + VD   +      E  + +Q   + ++       
Sbjct: 735  CRNLRDDSIPETTRTLLNSEMFQMSSSVDKPHKNAIFGSEPMVGDQLNGMQIDETTSNPN 794

Query: 1171 GM-------ISQVQAVDDHXXXXXXXXXXXXXXXXXXXXXXXXXLLFQERERSFFSN-DN 1326
             +       +SQ Q                                + E       N  +
Sbjct: 795  PLSESKLPFVSQTQTFSGASMGKDASNLFAATVSKIEEPHA-----YSEGRLVVSQNTSD 849

Query: 1327 VHGPDKNAVDLGFHPQLMSVTSSHQDSVNLLSHIELNQKHLLPNQHTSPKTEFNRTSDNF 1506
             +GP   + +LG      + +S  +   N    +  N KH             N    NF
Sbjct: 850  TNGPPVLSAELGTAFSCYNTSSVKEVQTNSDLKLHRNLKHN------------NELEGNF 897

Query: 1507 VELVGCYVQPAPILSVVLSTQGDDIHISVLCGILADRVRTIFICKVPLRDPRKGYPVFLG 1686
             ELVGCY+ P P+LS+++ T+GD+I++  LCG L D+ RT+F+ K+ + + R G P F+G
Sbjct: 898  -ELVGCYLHPMPVLSLLVVTKGDEINVCALCGHLVDKNRTLFLYKLAIEETRTGNPSFVG 956

Query: 1687 YTSIMLPSSKYTFCGEIAFGKFPLQFTPDGQCLVSSNSIKAPYCRDRSIHCLCSLCTTVC 1866
            +TS+  P S   F  E A  +  LQ TPDGQ LV   S+K PYCR+    CLCS C+  C
Sbjct: 957  HTSVTFPFSTDIFGRETALERSGLQLTPDGQNLVLLGSMKTPYCREGRTDCLCSTCSLNC 1016

Query: 1867 FDENAIQIIHVKLGYVSLVAKLKTDDSVLSILVCEPSHLVALEKNGRLQVWAMNSTW 2037
             +++ ++I+ VK GYVS++ KL T DS+  ILVCEP+HL+A  ++GRL +W MNS W
Sbjct: 1017 SEQSTVKIVQVKTGYVSVLVKLSTFDSMQCILVCEPNHLIAAGESGRLHLWTMNSAW 1073


>gb|AAF98582.1|AC013427_25 This gene may be cut off [Arabidopsis thaliana]
          Length = 554

 Score =  178 bits (452), Expect = 4e-42
 Identities = 86/186 (46%), Positives = 119/186 (63%)
 Frame = +1

Query: 1480 EFNRTSDNFVELVGCYVQPAPILSVVLSTQGDDIHISVLCGILADRVRTIFICKVPLRDP 1659
            + N   +  VEL+GCY  P P+ SV+L T G++I+I VL     DRVRT+F+ K+    P
Sbjct: 140  KINNEMEKTVELLGCYFHPMPVSSVLLRTVGNEIYILVLSFATEDRVRTLFMYKMSAEAP 199

Query: 1660 RKGYPVFLGYTSIMLPSSKYTFCGEIAFGKFPLQFTPDGQCLVSSNSIKAPYCRDRSIHC 1839
             KG+P  +G+T  +LP       G        L FTPDG  L+ + +IK PYCR R   C
Sbjct: 200  SKGFPSIIGHTPAILPIVDDKSSGNGTLEISNLHFTPDGLHLILTGNIKTPYCRKRETDC 259

Query: 1840 LCSLCTTVCFDENAIQIIHVKLGYVSLVAKLKTDDSVLSILVCEPSHLVALEKNGRLQVW 2019
             C +CT+ CF+ENA++I+ VK G+VSLV KL+ DDSV  ++VC+P++L+A  K+G L VW
Sbjct: 260  SCLICTSACFEENAVRIVQVKTGHVSLVTKLQADDSVQCVVVCDPNNLIAAVKSGNLIVW 319

Query: 2020 AMNSTW 2037
            AMNS W
Sbjct: 320  AMNSHW 325


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