BLASTX nr result

ID: Coptis23_contig00014198 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014198
         (261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277046.2| PREDICTED: telomerase Cajal body protein 1-l...   117   8e-25
emb|CAN78502.1| hypothetical protein VITISV_023070 [Vitis vinifera]   117   8e-25
ref|XP_002525611.1| WD-repeat protein, putative [Ricinus communi...   115   5e-24
ref|XP_002316658.1| predicted protein [Populus trichocarpa] gi|2...   115   5e-24
gb|ABK94016.1| unknown [Populus trichocarpa]                          115   5e-24

>ref|XP_002277046.2| PREDICTED: telomerase Cajal body protein 1-like [Vitis vinifera]
           gi|302144185|emb|CBI23312.3| unnamed protein product
           [Vitis vinifera]
          Length = 407

 Score =  117 bits (294), Expect = 8e-25
 Identities = 51/70 (72%), Positives = 65/70 (92%)
 Frame = +3

Query: 51  SLEWISAAFSAAFNPSGTKLFAGYNKSVRIFDIHRPGRDFEQYSTLQGNKEGQSGIISTI 230
           +++ I+ AFS AFNP+GTK+FAGYNK +R+FD+HRPGRDFEQYST++GNKEGQSGII+ I
Sbjct: 168 AVDEITTAFSIAFNPAGTKIFAGYNKCLRVFDVHRPGRDFEQYSTIKGNKEGQSGIIAAI 227

Query: 231 AFCPSNTGML 260
           AFCP++TGML
Sbjct: 228 AFCPTHTGML 237


>emb|CAN78502.1| hypothetical protein VITISV_023070 [Vitis vinifera]
          Length = 857

 Score =  117 bits (294), Expect = 8e-25
 Identities = 51/70 (72%), Positives = 65/70 (92%)
 Frame = +3

Query: 51  SLEWISAAFSAAFNPSGTKLFAGYNKSVRIFDIHRPGRDFEQYSTLQGNKEGQSGIISTI 230
           +++ I+ AFS AFNP+GTK+FAGYNK +R+FD+HRPGRDFEQYST++GNKEGQSGII+ I
Sbjct: 173 AVDEITTAFSIAFNPAGTKIFAGYNKCLRVFDVHRPGRDFEQYSTIKGNKEGQSGIIAAI 232

Query: 231 AFCPSNTGML 260
           AFCP++TGML
Sbjct: 233 AFCPTHTGML 242


>ref|XP_002525611.1| WD-repeat protein, putative [Ricinus communis]
           gi|223535047|gb|EEF36729.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 422

 Score =  115 bits (287), Expect = 5e-24
 Identities = 51/70 (72%), Positives = 66/70 (94%)
 Frame = +3

Query: 51  SLEWISAAFSAAFNPSGTKLFAGYNKSVRIFDIHRPGRDFEQYSTLQGNKEGQSGIISTI 230
           +++ I+AAFS +FNP+G K+FAGYNKS+R+FDIHRPGR FEQ+STLQGNKEGQ+GIIS+I
Sbjct: 159 AVDEITAAFSISFNPAGNKMFAGYNKSIRVFDIHRPGRVFEQHSTLQGNKEGQTGIISSI 218

Query: 231 AFCPSNTGML 260
           AFCP+++GML
Sbjct: 219 AFCPTHSGML 228


>ref|XP_002316658.1| predicted protein [Populus trichocarpa] gi|222859723|gb|EEE97270.1|
           predicted protein [Populus trichocarpa]
          Length = 374

 Score =  115 bits (287), Expect = 5e-24
 Identities = 51/70 (72%), Positives = 64/70 (91%)
 Frame = +3

Query: 51  SLEWISAAFSAAFNPSGTKLFAGYNKSVRIFDIHRPGRDFEQYSTLQGNKEGQSGIISTI 230
           +++ I+AA S AFNP+GTK+FAGYNKS+R+FDIHRPGRDF QYST+QGNKEGQ+GIIS +
Sbjct: 140 AVDEITAAISIAFNPAGTKIFAGYNKSIRVFDIHRPGRDFAQYSTIQGNKEGQTGIISAV 199

Query: 231 AFCPSNTGML 260
           AF P++TGML
Sbjct: 200 AFSPTHTGML 209


>gb|ABK94016.1| unknown [Populus trichocarpa]
          Length = 302

 Score =  115 bits (287), Expect = 5e-24
 Identities = 51/70 (72%), Positives = 64/70 (91%)
 Frame = +3

Query: 51  SLEWISAAFSAAFNPSGTKLFAGYNKSVRIFDIHRPGRDFEQYSTLQGNKEGQSGIISTI 230
           +++ I+AA S AFNP+GTK+FAGYNKS+R+FDIHRPGRDF QYST+QGNKEGQ+GIIS +
Sbjct: 39  AVDEITAAISIAFNPAGTKIFAGYNKSIRVFDIHRPGRDFAQYSTIQGNKEGQTGIISAV 98

Query: 231 AFCPSNTGML 260
           AF P++TGML
Sbjct: 99  AFSPTHTGML 108