BLASTX nr result

ID: Coptis23_contig00014193 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014193
         (659 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279174.2| PREDICTED: calcium-binding protein 39-like i...   228   1e-57
ref|XP_002279212.1| PREDICTED: calcium-binding protein 39-like i...   223   2e-56
ref|XP_002315537.1| predicted protein [Populus trichocarpa] gi|2...   220   2e-55
gb|ABK93517.1| unknown [Populus trichocarpa] gi|118483913|gb|ABK...   220   2e-55
ref|XP_002516814.1| structural constituent of ribosome, putative...   218   8e-55

>ref|XP_002279174.2| PREDICTED: calcium-binding protein 39-like isoform 1 [Vitis
           vinifera] gi|297736958|emb|CBI26159.3| unnamed protein
           product [Vitis vinifera]
          Length = 345

 Score =  228 bits (580), Expect = 1e-57
 Identities = 109/156 (69%), Positives = 126/156 (80%)
 Frame = -1

Query: 473 MSFSFFKASRGKAPLELVKAIRDSLVDLDTKTXXXXXXXXXXXXXXXKNFLSMRQLLSGD 294
           MSFSFFKASR K P ELVKAI+DSL+ LD+KT               KNF++M+ +LSGD
Sbjct: 1   MSFSFFKASRPKTPQELVKAIKDSLMALDSKTVAEVKALEKALEEVEKNFVTMKFMLSGD 60

Query: 293 GEVEPNLEHVSQFTIEICKEDVIGLFIHKLPILGWEARKDLVHCWSILLKQTVGSSYCCV 114
           GE EPN+E VSQ T+EICKEDV+ L IHKL ILGWEARKDLVHCWSILL+Q V S YCCV
Sbjct: 61  GETEPNMEQVSQLTLEICKEDVLALLIHKLSILGWEARKDLVHCWSILLRQMVDSRYCCV 120

Query: 113 DYIQNHSELLDFLVVCYDNKDVALNCGNMLRECIKF 6
           +YI+NH ELLDFLVVCYDNK++A+NCGNMLRECI+F
Sbjct: 121 EYIENHFELLDFLVVCYDNKEIAVNCGNMLRECIRF 156


>ref|XP_002279212.1| PREDICTED: calcium-binding protein 39-like isoform 2 [Vitis
           vinifera]
          Length = 339

 Score =  223 bits (569), Expect = 2e-56
 Identities = 108/156 (69%), Positives = 125/156 (80%)
 Frame = -1

Query: 473 MSFSFFKASRGKAPLELVKAIRDSLVDLDTKTXXXXXXXXXXXXXXXKNFLSMRQLLSGD 294
           MSFSFFKASR K P ELVKAI+DSL+ LD+KT                NF++M+ +LSGD
Sbjct: 1   MSFSFFKASRPKTPQELVKAIKDSLMALDSKTVAEALEEVEK------NFVTMKFMLSGD 54

Query: 293 GEVEPNLEHVSQFTIEICKEDVIGLFIHKLPILGWEARKDLVHCWSILLKQTVGSSYCCV 114
           GE EPN+E VSQ T+EICKEDV+ L IHKL ILGWEARKDLVHCWSILL+Q V S YCCV
Sbjct: 55  GETEPNMEQVSQLTLEICKEDVLALLIHKLSILGWEARKDLVHCWSILLRQMVDSRYCCV 114

Query: 113 DYIQNHSELLDFLVVCYDNKDVALNCGNMLRECIKF 6
           +YI+NH ELLDFLVVCYDNK++A+NCGNMLRECI+F
Sbjct: 115 EYIENHFELLDFLVVCYDNKEIAVNCGNMLRECIRF 150


>ref|XP_002315537.1| predicted protein [Populus trichocarpa] gi|222864577|gb|EEF01708.1|
           predicted protein [Populus trichocarpa]
          Length = 345

 Score =  220 bits (560), Expect = 2e-55
 Identities = 108/157 (68%), Positives = 121/157 (77%)
 Frame = -1

Query: 473 MSFSFFKASRGKAPLELVKAIRDSLVDLDTKTXXXXXXXXXXXXXXXKNFLSMRQLLSGD 294
           MSFSFFKASR K P E+VKA++DSLV LDTKT               KNF+SMR +L GD
Sbjct: 1   MSFSFFKASRPKTPQEVVKAMKDSLVALDTKTVVEVKALEKALEEVEKNFVSMRCMLCGD 60

Query: 293 GEVEPNLEHVSQFTIEICKEDVIGLFIHKLPILGWEARKDLVHCWSILLKQTVGSSYCCV 114
           GEVE N + VSQ  +E+CKEDV+ L IHKLP LGWEARKDLVHCWSILLKQ V S YC V
Sbjct: 61  GEVESNTDQVSQLALEVCKEDVLALMIHKLPNLGWEARKDLVHCWSILLKQKVDSRYCSV 120

Query: 113 DYIQNHSELLDFLVVCYDNKDVALNCGNMLRECIKFP 3
           +YI+NH E LDFLVVCYDNK++ALNCG MLRECIKFP
Sbjct: 121 EYIENHFEFLDFLVVCYDNKEIALNCGLMLRECIKFP 157


>gb|ABK93517.1| unknown [Populus trichocarpa] gi|118483913|gb|ABK93846.1| unknown
           [Populus trichocarpa]
          Length = 198

 Score =  220 bits (560), Expect = 2e-55
 Identities = 108/157 (68%), Positives = 121/157 (77%)
 Frame = -1

Query: 473 MSFSFFKASRGKAPLELVKAIRDSLVDLDTKTXXXXXXXXXXXXXXXKNFLSMRQLLSGD 294
           MSFSFFKASR K P E+VKA++DSLV LDTKT               KNF+SMR +L GD
Sbjct: 1   MSFSFFKASRPKTPQEVVKAMKDSLVALDTKTVVEVKALEKALEEVEKNFVSMRCMLCGD 60

Query: 293 GEVEPNLEHVSQFTIEICKEDVIGLFIHKLPILGWEARKDLVHCWSILLKQTVGSSYCCV 114
           GEVE N + VSQ  +E+CKEDV+ L IHKLP LGWEARKDLVHCWSILLKQ V S YC V
Sbjct: 61  GEVESNTDQVSQLALEVCKEDVLALMIHKLPNLGWEARKDLVHCWSILLKQKVDSRYCSV 120

Query: 113 DYIQNHSELLDFLVVCYDNKDVALNCGNMLRECIKFP 3
           +YI+NH E LDFLVVCYDNK++ALNCG MLRECIKFP
Sbjct: 121 EYIENHFEFLDFLVVCYDNKEIALNCGLMLRECIKFP 157


>ref|XP_002516814.1| structural constituent of ribosome, putative [Ricinus communis]
           gi|223543902|gb|EEF45428.1| structural constituent of
           ribosome, putative [Ricinus communis]
          Length = 631

 Score =  218 bits (555), Expect = 8e-55
 Identities = 106/156 (67%), Positives = 121/156 (77%)
 Frame = -1

Query: 473 MSFSFFKASRGKAPLELVKAIRDSLVDLDTKTXXXXXXXXXXXXXXXKNFLSMRQLLSGD 294
           MSFSFFK SR K PLE+VKA++DSL+ LDTKT               KN ++MR LL GD
Sbjct: 1   MSFSFFKPSRPKTPLEVVKAMKDSLMALDTKTVVEVKALEKALEEVEKNVVAMRCLLCGD 60

Query: 293 GEVEPNLEHVSQFTIEICKEDVIGLFIHKLPILGWEARKDLVHCWSILLKQTVGSSYCCV 114
           GEVEPN + VSQ  +E+CKEDV+ L IHKLP LGWEARKDLVHCWS+LLKQ V S YC V
Sbjct: 61  GEVEPNTDQVSQLVLEVCKEDVLALMIHKLPNLGWEARKDLVHCWSVLLKQKVDSKYCSV 120

Query: 113 DYIQNHSELLDFLVVCYDNKDVALNCGNMLRECIKF 6
           +YI+NH ELLDFLVVCYDNK++ALNCG MLRECIKF
Sbjct: 121 EYIENHFELLDFLVVCYDNKEIALNCGLMLRECIKF 156


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