BLASTX nr result

ID: Coptis23_contig00014191 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014191
         (1052 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263901.1| PREDICTED: uncharacterized protein LOC100254...   221   2e-55
ref|XP_002298807.1| predicted protein [Populus trichocarpa] gi|2...   201   3e-49
ref|XP_002518320.1| ATP binding protein, putative [Ricinus commu...   199   9e-49
ref|XP_002527342.1| hypothetical protein RCOM_0482310 [Ricinus c...   195   2e-47
gb|AFK38543.1| unknown [Medicago truncatula]                          193   5e-47

>ref|XP_002263901.1| PREDICTED: uncharacterized protein LOC100254138 [Vitis vinifera]
          Length = 467

 Score =  221 bits (564), Expect = 2e-55
 Identities = 164/413 (39%), Positives = 216/413 (52%), Gaps = 102/413 (24%)
 Frame = -2

Query: 1051 KIQPKPNDNQLTYVGGDTKIFVIDRNIKFIDIFNKVASICDSTDILFKYQLPGEDLDALI 872
            KIQP+P+DNQL+Y GG+TKI  +DR+IKF  + NK+ ++C++ D+ FKYQLPGEDLDALI
Sbjct: 52   KIQPRPHDNQLSYTGGETKILSVDRSIKFSPLINKLCALCEA-DVCFKYQLPGEDLDALI 110

Query: 871  SVTNNEDLEHMMLEYDRIHRLSPKPPRLRLFLFKS------FNNNKPNHQWLADSLNSVP 710
            SVTN++DLEHMM EYDR+ R S KP RLRLFLF +        + K   +   +++NS P
Sbjct: 111  SVTNDDDLEHMMHEYDRLCRPSAKPARLRLFLFPATPPSVGSGDMKTERERFFEAMNSGP 170

Query: 709  VQSQDFD-------------------------PVSQ------DPVVPVEIP--------- 650
            +QS D                           PV++      +P VP EIP         
Sbjct: 171  IQSVDATSPPATAPPSNVDFLFGLDKGVSPPAPVAKLPVPVPEPPVPAEIPSLVNPGGDG 230

Query: 649  -------GDSPAEIQRQIEELQRLQMANIANQEQAMFKKNSDEALARAFNADYYVHRNIP 491
                   G + AEIQRQI++LQRLQ   I+ QEQ  +++ SD+ +   +  DYYV + +P
Sbjct: 231  RVFAADLGVNQAEIQRQIQDLQRLQ---ISAQEQGAYQRKSDDNMYGGYAGDYYVQK-MP 286

Query: 490  EKXXXXXXXXXXXXPY-----------MTGG------------YLIPSPAGMYQTSTAVQ 380
            EK                           GG            Y+IP+PA +Y T  A +
Sbjct: 287  EKAPPQSTIPATVPATYWQEKRAPGGGFPGGVPATPGLQEQPVYMIPAPASVYHTPVA-R 345

Query: 379  PATGQVSQGYYAV---PQCGYREQ-PVF----------TVGPPQPKI--------IARPG 266
            P TGQ  QGYYA+   P   YREQ P++          T+  P PK+        + RP 
Sbjct: 346  PVTGQSGQGYYAMRMGPDV-YREQTPMYSVMQQPPVQATMPAPAPKLPNYSEGLGMGRPS 404

Query: 265  GAG--ETGYAQVAFDGAGRQVYYTAAPGSVMASSYQTV--VGTGGVDLRQVGG 119
            G G  +TGY QVA+D  GRQVYYT APG V+A  YQT+  V T    L Q  G
Sbjct: 405  GVGVADTGYTQVAYDSQGRQVYYT-APGGVVA-PYQTMAAVSTTSGPLNQESG 455


>ref|XP_002298807.1| predicted protein [Populus trichocarpa] gi|222846065|gb|EEE83612.1|
            predicted protein [Populus trichocarpa]
          Length = 479

 Score =  201 bits (510), Expect = 3e-49
 Identities = 157/431 (36%), Positives = 209/431 (48%), Gaps = 107/431 (24%)
 Frame = -2

Query: 1051 KIQPKPNDNQLTYVGGDTKIFVIDRNIKFIDIFNKVASICDSTDILFKYQLPGEDLDALI 872
            KI P+P+DNQL+Y+GG+TKI  +DRN+KF  + +K++++C  TD+ FKYQLPGEDLDALI
Sbjct: 52   KIHPRPHDNQLSYMGGETKILAVDRNLKFPVMISKLSALCGDTDVAFKYQLPGEDLDALI 111

Query: 871  SVTNNEDLEHMMLEYDRIHRLSPKPPRLRLFLF------KSF--NNNKPNHQWLADSLNS 716
            SVTN++DLEHMM EYDR++R S KP R+RLFLF       SF  + +K + +   ++LNS
Sbjct: 112  SVTNDDDLEHMMHEYDRLYRASAKPARMRLFLFPVNPSHASFGSDGDKSDRERFVEALNS 171

Query: 715  ----------VPVQSQDF----DPVSQDPVVPVEIP----------------GDSPAEIQ 626
                       P  + DF    D  +  P  PV++P                G  P+ +Q
Sbjct: 172  GPSQVVEATKTPANNVDFLFGLDKGASPPPPPVKVPDLPEIHVGSGHDDRFIGSDPSNLQ 231

Query: 625  RQIEELQRLQMANIANQEQAM--FKKNSDEALARAFNA---DYYVHRNIPEK-------- 485
              ++ +Q      I   EQ++   +KN DE L   + A   DYY+ + +PEK        
Sbjct: 232  AHLQRMQ------IREHEQSIGCNRKNIDENLVGGYAAAGGDYYMQK-LPEKVSPANLPV 284

Query: 484  ---XXXXXXXXXXXXPYMTGG-------------------YLIPSPA--GMYQTSTAVQP 377
                               GG                   Y+I  PA    Y     ++ 
Sbjct: 285  TMPPQVTAPPGYWPEKQAAGGGFPAAVAVTTAPGQMEQPVYMISGPAQGTAYHAPQVMRQ 344

Query: 376  ATGQVSQGYY----AVPQCG---YREQPVFTV------GPPQ--PKIIARPGGAG----E 254
             TGQ  Q YY      P  G   YREQPV+ V       PPQ  P  + RP G G    +
Sbjct: 345  VTGQTGQAYYMQRMGAPGHGPDVYREQPVYNVVPQHHQPPPQMGPMGVMRPSGPGVAVTD 404

Query: 253  TGYAQVAFDGA-GRQVYYTAAPGSV------------MASSYQTVVGTGGVDLRQVGGAL 113
             GYAQVA+D A GRQVYYTAA G V            M   +Q   G GG ++R VGG  
Sbjct: 405  GGYAQVAYDSAVGRQVYYTAAGGVVHQHQQHQQLQQQMPPQFQ---GIGGGEMRHVGGGG 461

Query: 112  NINQEGKVATT 80
             +  E KV TT
Sbjct: 462  QLAPEVKVVTT 472


>ref|XP_002518320.1| ATP binding protein, putative [Ricinus communis]
            gi|223542540|gb|EEF44080.1| ATP binding protein, putative
            [Ricinus communis]
          Length = 475

 Score =  199 bits (506), Expect = 9e-49
 Identities = 156/424 (36%), Positives = 204/424 (48%), Gaps = 103/424 (24%)
 Frame = -2

Query: 1051 KIQPKPNDNQLTYVGGDTKIFVIDRNIKFIDIFNKVASICDSTDILFKYQLPGEDLDALI 872
            KI P+P+DNQL Y+GGDTKI  +DRNIKF  + +K+AS+   TDI FKYQLPGEDLDALI
Sbjct: 51   KIHPRPHDNQLAYIGGDTKILAVDRNIKFSVMMSKLASLSGDTDISFKYQLPGEDLDALI 110

Query: 871  SVTNNEDLEHMMLEYDRIHRLSPKPPRLRLFLF-------KSFN---------------N 758
            SVTN++DLEHMM EYDR+ R S KP R+RLFLF        SF                N
Sbjct: 111  SVTNDDDLEHMMHEYDRLFRASNKPVRMRLFLFPVNPSPAASFGSEGSKSERDRFVEALN 170

Query: 757  NKPNHQWLADSLNSVPVQSQ-DF-------DPVSQDPVVPVEIP---------------- 650
            + P H  + +S N+ P+Q+  DF        P    P  P+++P                
Sbjct: 171  SGPTH--VPESTNTKPLQNNVDFLFGLEKGIPPPPPPAAPIKVPDLAEVHVGVGHDDRVI 228

Query: 649  GDSPAEIQRQIEELQRLQMANIANQEQAMFKKNSDEALARAFN----ADYYVHRNIPEK- 485
            G  P  I  Q   LQR+Q+     ++Q M++KNSD+ L   ++       Y  + +P+K 
Sbjct: 229  GSDPVAIHTQ---LQRMQIRE--QEQQTMYRKNSDDNLMGGYSGGGVGGEYFGQKLPDKI 283

Query: 484  ------XXXXXXXXXXXXPYMTGGY--------------------LIPSPAGMYQTSTAV 383
                                 +GG+                    L   P G    +  +
Sbjct: 284  PPPSSLPVTAPAGFWPEKQIQSGGFPQAAMAVATTPMPPEQQLYVLQGHPPGTVYHAPVM 343

Query: 382  QPATGQVSQGYYAVPQCG------YREQPVFTVGPPQ----PKIIAR---PGGAGET--G 248
            +  TGQ  Q YY     G      YREQP++ + PP     P  + R   PGG G T  G
Sbjct: 344  RQVTGQTGQPYYMQRMGGGGGPEVYREQPMYNMVPPPQQQGPMGVMRQGGPGGVGMTDGG 403

Query: 247  YAQVAFD-GAGRQVYYTAAPGSVM-----ASSYQTVVGTGGV--DLRQVGGALN---INQ 101
            YAQVA+D G GRQVYYTA  G ++      S YQ V G   V  ++R  GG      +NQ
Sbjct: 404  YAQVAYDSGVGRQVYYTAQGGGMVQQPQQPSPYQGVGGGVAVSGEMRHAGGGAGGGALNQ 463

Query: 100  EGKV 89
            EGKV
Sbjct: 464  EGKV 467


>ref|XP_002527342.1| hypothetical protein RCOM_0482310 [Ricinus communis]
            gi|223533261|gb|EEF35014.1| hypothetical protein
            RCOM_0482310 [Ricinus communis]
          Length = 415

 Score =  195 bits (495), Expect = 2e-47
 Identities = 149/373 (39%), Positives = 193/373 (51%), Gaps = 52/373 (13%)
 Frame = -2

Query: 1051 KIQPKPNDNQLTYVGGDTKIFVIDRNIKFIDIFNKVASIC--DSTDILFKYQLPGEDLDA 878
            KIQP+P+DNQL Y+GGDTKI  ++RNIKF    +K AS+C  D   I FKYQLPGEDLDA
Sbjct: 54   KIQPRPHDNQLAYIGGDTKILAVERNIKFSLFISKFASLCNTDHHHICFKYQLPGEDLDA 113

Query: 877  LISVTNNEDLEHMMLEYDRIHRLSPKPPRLRLFLFK-----SFNNN--KPNHQWLADSLN 719
            LISVTN+EDLEHMMLEYDR++R S KP RLRLFLF+     SF ++  K   QW  D+LN
Sbjct: 114  LISVTNDEDLEHMMLEYDRLYRASAKPARLRLFLFQLNPSNSFGSDDAKSERQWFVDALN 173

Query: 718  SVPVQ----SQDFDPVSQDPVVPVEIPGDSPAEIQRQIEELQRLQMANIANQEQAMFKKN 551
            SVPVQ    + DF     +  V VE       E Q+   +L+RLQ   IA+  + +F + 
Sbjct: 174  SVPVQVSPGNADF-LFGSEKAVTVE-------ENQQISPDLERLQ---IADTHEHVFNRK 222

Query: 550  SDEALARAFNADYYVHR-----NIPEKXXXXXXXXXXXXPYMTG---GYLIP-SPAGMYQ 398
             +EA +R +  +Y+  +       P              PY+      Y IP +   +YQ
Sbjct: 223  IEEANSRVYPVEYHQQKVGEIATPPAAQVAMPVLMQVPAPYLPERHVSYAIPGNEQTVYQ 282

Query: 397  -----TSTAVQPATGQVSQGYYAVPQCGYREQPVFTVGPP-----------------QPK 284
                 T T ++P  GQV QG Y +      +QPV+ + PP                 Q +
Sbjct: 283  VPYHHTPTTLRPVIGQVGQGCYGM------QQPVYNMVPPPLTTSATAVASLPQQQQQQQ 336

Query: 283  IIARPGGAG--------ETGYAQVAFDGAGRQVYYTAAPGSVMASSYQTVVGTGGVDLRQ 128
            +     G G        E GY QV +D AGRQVYYT    ++ A    TV          
Sbjct: 337  LGMYSEGTGMVQMQPKVEQGYLQVGYDSAGRQVYYTQQFQAMAAPPPATV---------P 387

Query: 127  VGGALNINQEGKV 89
            VG AL  NQ+G V
Sbjct: 388  VGAAL--NQDGMV 398


>gb|AFK38543.1| unknown [Medicago truncatula]
          Length = 450

 Score =  193 bits (491), Expect = 5e-47
 Identities = 142/380 (37%), Positives = 193/380 (50%), Gaps = 84/380 (22%)
 Frame = -2

Query: 1051 KIQPKPNDNQLTYVGGDTKIFVIDRNIKFIDIFNKVASICDST--DILFKYQLPGEDLDA 878
            KIQP+ +DNQL+Y+GGDTKI  +DR+IKF    +K++++CD+   DI FKYQLPGE+LDA
Sbjct: 48   KIQPRSHDNQLSYIGGDTKILAVDRSIKFQAFLSKLSTLCDALQQDISFKYQLPGEELDA 107

Query: 877  LISVTNNEDLEHMMLEYDRIHRLSPKPPRLRLFLFKSFNNN----------KPN------ 746
            LISVT  +DLEHMM EYDR++R S KP R+RLF+F + N+           KPN      
Sbjct: 108  LISVTTEDDLEHMMHEYDRLYRPSSKPVRMRLFIFIAPNSGSVSASQPDPLKPNSKVDFL 167

Query: 745  ----HQWLADSL--NSVPVQSQDFDP----VSQDPVVPVEIPGDSPAEIQRQIEELQRLQ 596
                ++ LA  +  +   V ++  DP    V+  P  P     D   EIQRQ++ LQ   
Sbjct: 168  FGIENKTLAQPIQPSYAAVTAKYHDPVPDLVAPQPDYPPRGSTDESVEIQRQLQRLQ--- 224

Query: 595  MANIANQEQAMFKKNSD---EALARAFNADYYVHR---NIP----------------EKX 482
               ++  EQ++++++SD      A A   DYYV +   NIP                +K 
Sbjct: 225  ---VSESEQSLYRRSSDGVTGGYAAAPGGDYYVQKMPENIPRSNSPVAVHHPAGYWSDKQ 281

Query: 481  XXXXXXXXXXXPYMTGG----YLIPSPAGMYQTSTAVQPATGQVSQGYYAVPQC---GYR 323
                           GG    Y++P P   YQT+  ++P T   +QGYYAV +    GYR
Sbjct: 282  FSGEAFPVTGMNTSGGGDQHVYMMPPPGTFYQTAQMMRPPT---AQGYYAVQRMASDGYR 338

Query: 322  EQPVFTVGPPQ--------------------------PKIIARPGGAGETGYAQVAFD-G 224
            EQPV+   PPQ                          P ++A    AG  GYAQVA+D  
Sbjct: 339  EQPVYGGIPPQNVAFSSSSAAQPVNPSAYQEGYGLVRPAVVAE--NAGAAGYAQVAYDSS 396

Query: 223  AGRQVYYTAAPGSVMASSYQ 164
            +GR VYYT   G V A  YQ
Sbjct: 397  SGRHVYYTTPGGMVHAPQYQ 416


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