BLASTX nr result

ID: Coptis23_contig00014180 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014180
         (253 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280691.2| PREDICTED: uncharacterized TPR repeat-contai...    91   2e-21
emb|CAN76555.1| hypothetical protein VITISV_011396 [Vitis vinifera]    91   2e-21
emb|CBI19798.3| unnamed protein product [Vitis vinifera]               91   2e-21
ref|XP_003555744.1| PREDICTED: uncharacterized TPR repeat-contai...    83   5e-20
ref|XP_002468136.1| hypothetical protein SORBIDRAFT_01g040210 [S...    81   4e-18

>ref|XP_002280691.2| PREDICTED: uncharacterized TPR repeat-containing protein
           At1g05150-like [Vitis vinifera]
          Length = 799

 Score = 90.5 bits (223), Expect(2) = 2e-21
 Identities = 42/55 (76%), Positives = 48/55 (87%)
 Frame = -2

Query: 168 HFRAGNCLYILGKCGEGK*QFLLALEAAQSSGNHSFYLLPQIHVNLGISLEGEGM 4
           HFRAGNCLY+LG+ GE K +F LALEAA++ GN S YLLPQIHVNLGI+LEGEGM
Sbjct: 265 HFRAGNCLYVLGRHGEAKEEFTLALEAAENGGNQSAYLLPQIHVNLGIALEGEGM 319



 Score = 36.6 bits (83), Expect(2) = 2e-21
 Identities = 17/27 (62%), Positives = 21/27 (77%)
 Frame = -3

Query: 251 YELHLFKDALVSFKRSCELQLENFRPY 171
           YE  LFK+ALVSFKR+CELQ  + R +
Sbjct: 239 YEHQLFKEALVSFKRACELQPVDVRSH 265


>emb|CAN76555.1| hypothetical protein VITISV_011396 [Vitis vinifera]
          Length = 799

 Score = 90.5 bits (223), Expect(2) = 2e-21
 Identities = 42/55 (76%), Positives = 48/55 (87%)
 Frame = -2

Query: 168 HFRAGNCLYILGKCGEGK*QFLLALEAAQSSGNHSFYLLPQIHVNLGISLEGEGM 4
           HFRAGNCLY+LG+ GE K +F LALEAA++ GN S YLLPQIHVNLGI+LEGEGM
Sbjct: 265 HFRAGNCLYVLGRHGEAKEEFTLALEAAENGGNQSAYLLPQIHVNLGIALEGEGM 319



 Score = 36.6 bits (83), Expect(2) = 2e-21
 Identities = 17/27 (62%), Positives = 21/27 (77%)
 Frame = -3

Query: 251 YELHLFKDALVSFKRSCELQLENFRPY 171
           YE  LFK+ALVSFKR+CELQ  + R +
Sbjct: 239 YEHQLFKEALVSFKRACELQPVDVRSH 265


>emb|CBI19798.3| unnamed protein product [Vitis vinifera]
          Length = 778

 Score = 90.5 bits (223), Expect(2) = 2e-21
 Identities = 42/55 (76%), Positives = 48/55 (87%)
 Frame = -2

Query: 168 HFRAGNCLYILGKCGEGK*QFLLALEAAQSSGNHSFYLLPQIHVNLGISLEGEGM 4
           HFRAGNCLY+LG+ GE K +F LALEAA++ GN S YLLPQIHVNLGI+LEGEGM
Sbjct: 212 HFRAGNCLYVLGRHGEAKEEFTLALEAAENGGNQSAYLLPQIHVNLGIALEGEGM 266



 Score = 36.6 bits (83), Expect(2) = 2e-21
 Identities = 17/27 (62%), Positives = 21/27 (77%)
 Frame = -3

Query: 251 YELHLFKDALVSFKRSCELQLENFRPY 171
           YE  LFK+ALVSFKR+CELQ  + R +
Sbjct: 186 YEHQLFKEALVSFKRACELQPVDVRSH 212


>ref|XP_003555744.1| PREDICTED: uncharacterized TPR repeat-containing protein
           At1g05150-like isoform 1 [Glycine max]
           gi|356575231|ref|XP_003555745.1| PREDICTED:
           uncharacterized TPR repeat-containing protein
           At1g05150-like isoform 2 [Glycine max]
          Length = 802

 Score = 82.8 bits (203), Expect(2) = 5e-20
 Identities = 39/56 (69%), Positives = 47/56 (83%)
 Frame = -2

Query: 171 PHFRAGNCLYILGKCGEGK*QFLLALEAAQSSGNHSFYLLPQIHVNLGISLEGEGM 4
           PHFRAGNCLY+L +  E K +FLLALE+A++ GN   YLLPQI+VNLGI+LEGEGM
Sbjct: 270 PHFRAGNCLYVLVRYKEAKEEFLLALESAEAGGNQWAYLLPQIYVNLGIALEGEGM 325



 Score = 39.7 bits (91), Expect(2) = 5e-20
 Identities = 18/27 (66%), Positives = 22/27 (81%)
 Frame = -3

Query: 251 YELHLFKDALVSFKRSCELQLENFRPY 171
           YE  LFK+ALVSFKR+CELQ  + RP+
Sbjct: 245 YEHQLFKEALVSFKRACELQPVDVRPH 271


>ref|XP_002468136.1| hypothetical protein SORBIDRAFT_01g040210 [Sorghum bicolor]
           gi|241921990|gb|EER95134.1| hypothetical protein
           SORBIDRAFT_01g040210 [Sorghum bicolor]
          Length = 843

 Score = 80.9 bits (198), Expect(2) = 4e-18
 Identities = 37/56 (66%), Positives = 46/56 (82%)
 Frame = -2

Query: 171 PHFRAGNCLYILGKCGEGK*QFLLALEAAQSSGNHSFYLLPQIHVNLGISLEGEGM 4
           PHFRAGNCLY LG+  E K ++LLALEAA++ G+ S  +LPQIHVNLGI++E EGM
Sbjct: 305 PHFRAGNCLYALGRYAEAKEEYLLALEAAEAGGSQSADILPQIHVNLGIAMEAEGM 360



 Score = 35.0 bits (79), Expect(2) = 4e-18
 Identities = 15/26 (57%), Positives = 20/26 (76%)
 Frame = -3

Query: 248 ELHLFKDALVSFKRSCELQLENFRPY 171
           E  LF+DAL SF+R+CELQ  + RP+
Sbjct: 281 EHRLFRDALASFRRACELQPTDVRPH 306


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