BLASTX nr result

ID: Coptis23_contig00014177 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014177
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272471.1| PREDICTED: scarecrow-like protein 8-like [Vi...    94   1e-17
gb|ABD72964.1| GRAS9 [Solanum lycopersicum]                            87   1e-15
ref|NP_001234327.1| GRAS10 protein [Solanum lycopersicum] gi|894...    84   9e-15
ref|XP_002513664.1| DELLA protein GAI, putative [Ricinus communi...    84   1e-14
gb|ADN33769.1| GRAS family transcription factor [Cucumis melo su...    79   3e-13

>ref|XP_002272471.1| PREDICTED: scarecrow-like protein 8-like [Vitis vinifera]
          Length = 614

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 45/82 (54%), Positives = 60/82 (73%)
 Frame = +2

Query: 59  KQSFIDIANAISEGNTDAAVLKLETLKQVCNLRGDSEQRFISYMVSALGSKINPTENPPP 238
           KQS  + A+AISEG  DAA+  L  L  V N RG+SEQR  +YM SAL S+++  ENPPP
Sbjct: 245 KQSAHEAASAISEGMLDAAMESLTRLTLVANARGNSEQRLAAYMASALKSRLSAAENPPP 304

Query: 239 IQQLFSNDHVIATQMLFEASPC 304
           + +L+S DH++ATQML++ SPC
Sbjct: 305 VAELYSKDHIMATQMLYDMSPC 326


>gb|ABD72964.1| GRAS9 [Solanum lycopersicum]
          Length = 496

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 41/82 (50%), Positives = 57/82 (69%)
 Frame = +2

Query: 59  KQSFIDIANAISEGNTDAAVLKLETLKQVCNLRGDSEQRFISYMVSALGSKINPTENPPP 238
           +QS ++ A AI +G T+ AV  L  L QV ++RG SEQR  +YMVSAL S++N TE PPP
Sbjct: 126 RQSIVEAATAIIDGKTNVAVQILTRLAQVADVRGSSEQRLTAYMVSALRSRVNSTEYPPP 185

Query: 239 IQQLFSNDHVIATQMLFEASPC 304
           + +L S +H ++ Q L+E SPC
Sbjct: 186 VMELRSKEHAVSAQNLYEISPC 207


>ref|NP_001234327.1| GRAS10 protein [Solanum lycopersicum] gi|89474476|gb|ABD72965.1|
           GRAS10 [Solanum lycopersicum]
          Length = 631

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 40/82 (48%), Positives = 54/82 (65%)
 Frame = +2

Query: 59  KQSFIDIANAISEGNTDAAVLKLETLKQVCNLRGDSEQRFISYMVSALGSKINPTENPPP 238
           KQS I+ A AI +G  D A+  L  L QV N+RG S+QR  +YMV+AL S++NP + PPP
Sbjct: 263 KQSIIEAATAIYDGKNDVALEILTRLSQVANIRGSSDQRLTAYMVAALRSRLNPVDYPPP 322

Query: 239 IQQLFSNDHVIATQMLFEASPC 304
           + +L S +H   T  L+E SPC
Sbjct: 323 VLELQSKEHTETTHNLYEVSPC 344


>ref|XP_002513664.1| DELLA protein GAI, putative [Ricinus communis]
           gi|223547572|gb|EEF49067.1| DELLA protein GAI, putative
           [Ricinus communis]
          Length = 615

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 37/82 (45%), Positives = 57/82 (69%)
 Frame = +2

Query: 59  KQSFIDIANAISEGNTDAAVLKLETLKQVCNLRGDSEQRFISYMVSALGSKINPTENPPP 238
           K + ++ A+AI +G T+ A   L  + QV N RG+SEQR + YM  AL S++N  +NPPP
Sbjct: 245 KHTLVEAASAIYDGKTEVASEILTRVSQVSNPRGNSEQRLMEYMSMALKSRLNSADNPPP 304

Query: 239 IQQLFSNDHVIATQMLFEASPC 304
           + +LF+ +H+ +TQ+L+E SPC
Sbjct: 305 VAELFAKEHIASTQLLYELSPC 326


>gb|ADN33769.1| GRAS family transcription factor [Cucumis melo subsp. melo]
          Length = 508

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 37/82 (45%), Positives = 54/82 (65%)
 Frame = +2

Query: 59  KQSFIDIANAISEGNTDAAVLKLETLKQVCNLRGDSEQRFISYMVSALGSKINPTENPPP 238
           KQS I+ A AISEG  +     L  + ++ N RG+S QR   YMV AL S++NP E PPP
Sbjct: 233 KQSVIEAATAISEGKLEGLDEILAPVVKISNARGNSVQRLAEYMVLALKSRVNPVEFPPP 292

Query: 239 IQQLFSNDHVIATQMLFEASPC 304
           + +++ ++H  ATQ+L++ SPC
Sbjct: 293 VVEIYGDEHSAATQLLYDVSPC 314


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