BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014174
         (587 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285809.1| PREDICTED: tRNA modification GTPase MnmE [Vi...   211   6e-53
ref|XP_002301037.1| predicted protein [Populus trichocarpa] gi|2...   204   9e-51
ref|XP_002889172.1| hypothetical protein ARALYDRAFT_895691 [Arab...   202   3e-50
gb|AAF17686.1|AC009243_13 F28K19.23 [Arabidopsis thaliana]            202   4e-50
ref|NP_177924.3| putative tRNA modification GTPase [Arabidopsis ...   202   4e-50

>ref|XP_002285809.1| PREDICTED: tRNA modification GTPase MnmE [Vitis vinifera]
           gi|302141924|emb|CBI19127.3| unnamed protein product
           [Vitis vinifera]
          Length = 571

 Score =  211 bits (538), Expect = 6e-53
 Identities = 117/199 (58%), Positives = 134/199 (67%), Gaps = 6/199 (3%)
 Frame = +2

Query: 8   PSHLTLFFLNPKPFSQLFNHSPS--SKLHFTPKDEATPISKSEKMGFQPIKEVPTEXXXX 181
           P+   L+   P        HS +    LH TP D    + K E++G + + +   E    
Sbjct: 38  PTFQKLYSFFPPSLKPYHTHSKTLVPHLHLTPNDTTLVLKKDERLGSRSVNQEHIEGTST 97

Query: 182 XXXXXXXX-LGTQPGAVGIVRLSGPSAVDVASRVFRPMGKRK-KILGTSC--WRPRSHFV 349
                    LG  P AVGIVRLSGP AV + +RVFRP  + K K LG+    WRP SH V
Sbjct: 98  TTIAAIVTSLGGPPSAVGIVRLSGPEAVAIVARVFRPARRNKGKTLGSGSGSWRPTSHVV 157

Query: 350 EYGVVLDWGGNVVDEVLAVPMLAPRSYTREDVVELQCHGNDVCLRRVLRACLEAGARLAE 529
           EYGVVLD  GNVVDEVLA+PMLAPRSYTREDVVELQCHG++VCLRRVLRACLE+GARLAE
Sbjct: 158 EYGVVLDHHGNVVDEVLAIPMLAPRSYTREDVVELQCHGSEVCLRRVLRACLESGARLAE 217

Query: 530 PGEFTLRAFLNGRLDLSQA 586
           PGEFTLRAFLNGRLDLSQA
Sbjct: 218 PGEFTLRAFLNGRLDLSQA 236


>ref|XP_002301037.1| predicted protein [Populus trichocarpa] gi|222842763|gb|EEE80310.1|
           predicted protein [Populus trichocarpa]
          Length = 483

 Score =  204 bits (519), Expect = 9e-51
 Identities = 102/127 (80%), Positives = 113/127 (88%)
 Frame = +2

Query: 206 LGTQPGAVGIVRLSGPSAVDVASRVFRPMGKRKKILGTSCWRPRSHFVEYGVVLDWGGNV 385
           +G  P +VGIVRLSGPSAV++A+RVF+PM K+KK  G   W+P SH V+YGVVLD  GNV
Sbjct: 22  VGGPPASVGIVRLSGPSAVEIAARVFKPMRKKKK-KGFCVWKPTSHVVDYGVVLDHQGNV 80

Query: 386 VDEVLAVPMLAPRSYTREDVVELQCHGNDVCLRRVLRACLEAGARLAEPGEFTLRAFLNG 565
           VDEVLAVPMLAPRSYTREDVVELQCHG +VCLRRVLRAC+EAGARLAEPGEFTLRAFLNG
Sbjct: 81  VDEVLAVPMLAPRSYTREDVVELQCHGTEVCLRRVLRACIEAGARLAEPGEFTLRAFLNG 140

Query: 566 RLDLSQA 586
           RLDLSQA
Sbjct: 141 RLDLSQA 147


>ref|XP_002889172.1| hypothetical protein ARALYDRAFT_895691 [Arabidopsis lyrata subsp.
           lyrata] gi|297335013|gb|EFH65431.1| hypothetical protein
           ARALYDRAFT_895691 [Arabidopsis lyrata subsp. lyrata]
          Length = 560

 Score =  202 bits (515), Expect = 3e-50
 Identities = 104/128 (81%), Positives = 112/128 (87%), Gaps = 1/128 (0%)
 Frame = +2

Query: 206 LGTQPGAVGIVRLSGPSAVDVASRVFRPMGKRKKILGTS-CWRPRSHFVEYGVVLDWGGN 382
           +G  PGAVGIVRLSGP AV+VA RVFR   KRKK    S  W+P+SHFVEYGVV+D  GN
Sbjct: 101 IGGPPGAVGIVRLSGPKAVEVARRVFRSAKKRKKKDSDSDSWQPKSHFVEYGVVVDSHGN 160

Query: 383 VVDEVLAVPMLAPRSYTREDVVELQCHGNDVCLRRVLRACLEAGARLAEPGEFTLRAFLN 562
           VVDEVLAVPMLAPRSYTREDVVELQCHG++VCLRRVLR C+EAGARLAEPGEFTLRAFLN
Sbjct: 161 VVDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRTCVEAGARLAEPGEFTLRAFLN 220

Query: 563 GRLDLSQA 586
           GRLDLSQA
Sbjct: 221 GRLDLSQA 228


>gb|AAF17686.1|AC009243_13 F28K19.23 [Arabidopsis thaliana]
          Length = 613

 Score =  202 bits (513), Expect = 4e-50
 Identities = 102/128 (79%), Positives = 111/128 (86%), Gaps = 1/128 (0%)
 Frame = +2

Query: 206 LGTQPGAVGIVRLSGPSAVDVASRVFRPMGK-RKKILGTSCWRPRSHFVEYGVVLDWGGN 382
           +G  PGAVGIVRLSGP AV+VA RVFR   K +KK   +  WRP+SHFVEYG V+D  GN
Sbjct: 137 IGGPPGAVGIVRLSGPKAVEVARRVFRSAKKTKKKESDSDTWRPKSHFVEYGAVVDSNGN 196

Query: 383 VVDEVLAVPMLAPRSYTREDVVELQCHGNDVCLRRVLRACLEAGARLAEPGEFTLRAFLN 562
           VVDEVLAVPMLAPRSYTREDVVELQCHG++VCLRRVLR C+EAGARLAEPGEFTLRAFLN
Sbjct: 197 VVDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRTCVEAGARLAEPGEFTLRAFLN 256

Query: 563 GRLDLSQA 586
           GRLDLSQA
Sbjct: 257 GRLDLSQA 264


>ref|NP_177924.3| putative tRNA modification GTPase [Arabidopsis thaliana]
           gi|51536472|gb|AAU05474.1| At1g78010 [Arabidopsis
           thaliana] gi|52421301|gb|AAU45220.1| At1g78010
           [Arabidopsis thaliana] gi|332197936|gb|AEE36057.1|
           putative tRNA modification GTPase [Arabidopsis thaliana]
          Length = 560

 Score =  202 bits (513), Expect = 4e-50
 Identities = 102/128 (79%), Positives = 111/128 (86%), Gaps = 1/128 (0%)
 Frame = +2

Query: 206 LGTQPGAVGIVRLSGPSAVDVASRVFRPMGK-RKKILGTSCWRPRSHFVEYGVVLDWGGN 382
           +G  PGAVGIVRLSGP AV+VA RVFR   K +KK   +  WRP+SHFVEYG V+D  GN
Sbjct: 101 IGGPPGAVGIVRLSGPKAVEVARRVFRSAKKTKKKESDSDTWRPKSHFVEYGAVVDSNGN 160

Query: 383 VVDEVLAVPMLAPRSYTREDVVELQCHGNDVCLRRVLRACLEAGARLAEPGEFTLRAFLN 562
           VVDEVLAVPMLAPRSYTREDVVELQCHG++VCLRRVLR C+EAGARLAEPGEFTLRAFLN
Sbjct: 161 VVDEVLAVPMLAPRSYTREDVVELQCHGSEVCLRRVLRTCVEAGARLAEPGEFTLRAFLN 220

Query: 563 GRLDLSQA 586
           GRLDLSQA
Sbjct: 221 GRLDLSQA 228