BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014173
         (370 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635182.1| PREDICTED: pentatricopeptide repeat-containi...   132   3e-29
ref|XP_002456460.1| hypothetical protein SORBIDRAFT_03g036710 [S...   130   1e-28
ref|XP_003567190.1| PREDICTED: pentatricopeptide repeat-containi...   129   2e-28
gb|AFW84877.1| hypothetical protein ZEAMMB73_259977 [Zea mays]        129   3e-28
ref|XP_003567192.1| PREDICTED: pentatricopeptide repeat-containi...   129   3e-28

>ref|XP_003635182.1| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
           mitochondrial-like [Vitis vinifera]
          Length = 382

 Score =  132 bits (332), Expect = 3e-29
 Identities = 61/120 (50%), Positives = 86/120 (71%)
 Frame = -1

Query: 367 YEDGRFLNSEMIWARMEKKQIVPDIRSYNAKLRGLVVAGKIKEAVKLVESLKTKETKPNT 188
           Y  GRFL+ E IW RMEKK I+PDIRSYNAKL GLV   ++ E + LVE ++TK  KP+ 
Sbjct: 211 YTSGRFLDGEKIWGRMEKKNILPDIRSYNAKLVGLVSEKRMLEGIGLVEEMQTKGIKPDG 270

Query: 187 ISYNALIRGYCNDGKLDEAKRVYDDLLKDELVPNRWTYEILLPAVCEKGDYVYALKLCEK 8
            S+NALI+G+CNDGK+DEA   Y  + +++ +P++ T+  L+P  CEKG +  A +LC++
Sbjct: 271 YSFNALIKGFCNDGKVDEATNWYGKMRENDCLPDKLTFATLVPLYCEKGSFDQAFELCKE 330


>ref|XP_002456460.1| hypothetical protein SORBIDRAFT_03g036710 [Sorghum bicolor]
           gi|241928435|gb|EES01580.1| hypothetical protein
           SORBIDRAFT_03g036710 [Sorghum bicolor]
          Length = 439

 Score =  130 bits (327), Expect = 1e-28
 Identities = 58/121 (47%), Positives = 88/121 (72%)
 Frame = -1

Query: 370 FYEDGRFLNSEMIWARMEKKQIVPDIRSYNAKLRGLVVAGKIKEAVKLVESLKTKETKPN 191
           FY +  F ++E +W  M+++ I PD +SYNAKLRGLV  G++++AV L+E ++ +  KP+
Sbjct: 223 FYNNDSFDDAEKVWEMMKERNIEPDEKSYNAKLRGLVSQGRVEDAVALIERMQKEGPKPD 282

Query: 190 TISYNALIRGYCNDGKLDEAKRVYDDLLKDELVPNRWTYEILLPAVCEKGDYVYALKLCE 11
           ++SYN LIRGYC +G+L+EAK+VYDDL+K+E  PNR T+  L+P + E G+   AL  C 
Sbjct: 283 SVSYNELIRGYCKEGRLNEAKKVYDDLIKNECAPNRGTFHTLVPHLVEAGELDRALSCCH 342

Query: 10  K 8
           +
Sbjct: 343 E 343


>ref|XP_003567190.1| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
           mitochondrial-like [Brachypodium distachyon]
          Length = 463

 Score =  129 bits (325), Expect = 2e-28
 Identities = 58/119 (48%), Positives = 88/119 (73%)
 Frame = -1

Query: 370 FYEDGRFLNSEMIWARMEKKQIVPDIRSYNAKLRGLVVAGKIKEAVKLVESLKTKETKPN 191
           FY++GR  ++E +W  M+   + PD +SYNAKLRGLV  G+I++AV +VE ++ +  KP+
Sbjct: 260 FYQNGRMDDAEAVWEMMKGWNLEPDTKSYNAKLRGLVAEGRIEDAVAVVERMEKEGPKPD 319

Query: 190 TISYNALIRGYCNDGKLDEAKRVYDDLLKDELVPNRWTYEILLPAVCEKGDYVYALKLC 14
           T+SYN LIRGYC+ G+L++AK++YD L+K+E  PNR TYE LLP + + G+   A++ C
Sbjct: 320 TVSYNELIRGYCSAGRLEDAKKLYDGLVKNECAPNRGTYETLLPRLLQAGELDCAVRYC 378


>gb|AFW84877.1| hypothetical protein ZEAMMB73_259977 [Zea mays]
          Length = 453

 Score =  129 bits (324), Expect = 3e-28
 Identities = 56/121 (46%), Positives = 87/121 (71%)
 Frame = -1

Query: 370 FYEDGRFLNSEMIWARMEKKQIVPDIRSYNAKLRGLVVAGKIKEAVKLVESLKTKETKPN 191
           FY + RF + E +W  M+++ + PD RSYNAKLRGLV  G++++A  L+E ++ +  KP+
Sbjct: 237 FYSNDRFDDVEKVWEMMKERNVEPDARSYNAKLRGLVSQGRVEDAAALIERMQKEGPKPD 296

Query: 190 TISYNALIRGYCNDGKLDEAKRVYDDLLKDELVPNRWTYEILLPAVCEKGDYVYALKLCE 11
           ++SYN LIRGYCN+G+L+EAK+VYD+++K+   PNR T+  L+P   E G+  +AL  C 
Sbjct: 297 SVSYNELIRGYCNEGRLNEAKKVYDNMIKNGYAPNRGTFHTLVPHFVEAGELDHALSCCH 356

Query: 10  K 8
           +
Sbjct: 357 E 357


>ref|XP_003567192.1| PREDICTED: pentatricopeptide repeat-containing protein At3g13160,
           mitochondrial-like, partial [Brachypodium distachyon]
          Length = 457

 Score =  129 bits (323), Expect = 3e-28
 Identities = 57/121 (47%), Positives = 90/121 (74%)
 Frame = -1

Query: 370 FYEDGRFLNSEMIWARMEKKQIVPDIRSYNAKLRGLVVAGKIKEAVKLVESLKTKETKPN 191
           F ++GR  ++E +W  M+++ + PD +SYNAKLRGLV  G+I++AV +VE ++ +  KP+
Sbjct: 253 FSKNGRVDDAEAVWEMMKERNLEPDTKSYNAKLRGLVAEGRIEDAVAVVERMEKEGPKPD 312

Query: 190 TISYNALIRGYCNDGKLDEAKRVYDDLLKDELVPNRWTYEILLPAVCEKGDYVYALKLCE 11
           T+SYN LIRGYC+ G+L++AK++YD L+K+E  PN+ TYE LLP + + G+   AL+ C 
Sbjct: 313 TVSYNELIRGYCSAGRLEDAKKLYDGLVKNECAPNKGTYETLLPRLLQAGELDCALRYCH 372

Query: 10  K 8
           +
Sbjct: 373 E 373