BLASTX nr result

ID: Coptis23_contig00014169 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014169
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004145573.1| PREDICTED: alkylated DNA repair protein alkB...   131   5e-29
ref|XP_002519921.1| nucleic acid binding protein, putative [Rici...   126   2e-27
ref|XP_002891136.1| oxidoreductase [Arabidopsis lyrata subsp. ly...   124   1e-26
ref|XP_003612528.1| Alkylated DNA repair protein alkB-like prote...   123   2e-26
emb|CBI29214.3| unnamed protein product [Vitis vinifera]              120   9e-26

>ref|XP_004145573.1| PREDICTED: alkylated DNA repair protein alkB homolog 8-like
           [Cucumis sativus] gi|449523025|ref|XP_004168525.1|
           PREDICTED: alkylated DNA repair protein alkB homolog
           8-like [Cucumis sativus]
          Length = 344

 Score =  131 bits (330), Expect = 5e-29
 Identities = 59/85 (69%), Positives = 71/85 (83%)
 Frame = -2

Query: 258 LEASELQIPGLYLLRDFITTEQEQELLAQVDARPWENLAKRRVQHYGYEFLYQTRNVNTK 79
           L ASEL IPGL+LL DF+  ++E++LL +VDARPW NLAKRRVQHYGYEF YQTRNVNTK
Sbjct: 114 LSASELDIPGLFLLHDFVNAKEEEDLLREVDARPWNNLAKRRVQHYGYEFCYQTRNVNTK 173

Query: 78  HHLGQLPSFLSPILENISSFPNITD 4
           H LG+LPSF+S +++ IS FPN  D
Sbjct: 174 HQLGELPSFVSHVVDRISMFPNTED 198


>ref|XP_002519921.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223540967|gb|EEF42525.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 421

 Score =  126 bits (316), Expect = 2e-27
 Identities = 59/86 (68%), Positives = 72/86 (83%)
 Frame = -2

Query: 258 LEASELQIPGLYLLRDFITTEQEQELLAQVDARPWENLAKRRVQHYGYEFLYQTRNVNTK 79
           L ASEL IPGLYLL DF++ E+EQELLA VDARPW++L+KRRVQHYGYEF YQTRNV+TK
Sbjct: 148 LVASELNIPGLYLLPDFVSAEEEQELLAAVDARPWKSLSKRRVQHYGYEFCYQTRNVDTK 207

Query: 78  HHLGQLPSFLSPILENISSFPNITDN 1
             LG+LP F+S +LE I SFP + ++
Sbjct: 208 QQLGELPPFISLVLERILSFPELGES 233


>ref|XP_002891136.1| oxidoreductase [Arabidopsis lyrata subsp. lyrata]
           gi|297336978|gb|EFH67395.1| oxidoreductase [Arabidopsis
           lyrata subsp. lyrata]
          Length = 344

 Score =  124 bits (310), Expect = 1e-26
 Identities = 59/83 (71%), Positives = 68/83 (81%)
 Frame = -2

Query: 249 SELQIPGLYLLRDFITTEQEQELLAQVDARPWENLAKRRVQHYGYEFLYQTRNVNTKHHL 70
           SEL IPGL+LL DF++ E+EQ+LLA VDARPW  LAKRRVQHYGYEF Y TRNV+TK  L
Sbjct: 119 SELNIPGLFLLPDFVSVEEEQQLLAAVDARPWIGLAKRRVQHYGYEFCYGTRNVDTKKRL 178

Query: 69  GQLPSFLSPILENISSFPNITDN 1
           G+LPSF+SPILE +S FPN   N
Sbjct: 179 GELPSFVSPILERMSLFPNFDIN 201


>ref|XP_003612528.1| Alkylated DNA repair protein alkB-like protein [Medicago
           truncatula] gi|355513863|gb|AES95486.1| Alkylated DNA
           repair protein alkB-like protein [Medicago truncatula]
          Length = 344

 Score =  123 bits (308), Expect = 2e-26
 Identities = 60/96 (62%), Positives = 70/96 (72%)
 Frame = -2

Query: 303 KPKPXXXXXXXXXXSLEASELQIPGLYLLRDFITTEQEQELLAQVDARPWENLAKRRVQH 124
           +P P          S+ AS+L IPGLYLL DF++  +E+ELL  VD+RPW +LAKRRVQH
Sbjct: 96  QPNPQDQVKDLVPVSMTASDLNIPGLYLLHDFVSATEEEELLQSVDSRPWNSLAKRRVQH 155

Query: 123 YGYEFLYQTRNVNTKHHLGQLPSFLSPILENISSFP 16
           YGYEF Y  RNVNTK  LG+LPSFLSPILE ISS P
Sbjct: 156 YGYEFCYDIRNVNTKRCLGELPSFLSPILERISSCP 191


>emb|CBI29214.3| unnamed protein product [Vitis vinifera]
          Length = 912

 Score =  120 bits (302), Expect = 9e-26
 Identities = 54/80 (67%), Positives = 69/80 (86%)
 Frame = -2

Query: 249 SELQIPGLYLLRDFITTEQEQELLAQVDARPWENLAKRRVQHYGYEFLYQTRNVNTKHHL 70
           SEL IPG+YLL DF++ ++E+ELLA VD   W++L+KRRVQHYGYEF Y+TRNVNTK +L
Sbjct: 685 SELNIPGIYLLHDFVSAKEEEELLAAVDKMSWKSLSKRRVQHYGYEFCYETRNVNTKQYL 744

Query: 69  GQLPSFLSPILENISSFPNI 10
           G+LPSF+S I+E ISSFPN+
Sbjct: 745 GKLPSFVSAIVERISSFPNL 764