BLASTX nr result

ID: Coptis23_contig00014167 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014167
         (591 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274358.1| PREDICTED: mRNA decapping complex subunit 2 ...    89   4e-16
emb|CAN75444.1| hypothetical protein VITISV_019659 [Vitis vinifera]    89   4e-16
ref|XP_002311091.1| predicted protein [Populus trichocarpa] gi|2...    82   5e-14
ref|XP_002532755.1| conserved hypothetical protein [Ricinus comm...    82   7e-14
ref|XP_002316368.1| predicted protein [Populus trichocarpa] gi|2...    81   2e-13

>ref|XP_002274358.1| PREDICTED: mRNA decapping complex subunit 2 [Vitis vinifera]
           gi|296086018|emb|CBI31459.3| unnamed protein product
           [Vitis vinifera]
          Length = 321

 Score = 89.4 bits (220), Expect = 4e-16
 Identities = 45/78 (57%), Positives = 55/78 (70%), Gaps = 2/78 (2%)
 Frame = +2

Query: 2   ISAHQPPTTQKSDTFYKGMCVWKAKNSSIGGTGM--ESQQTKHGSEVRPIDSGPGKSLRN 175
           ISAHQPP   K D   KG CVWKAKNSS G + M  E+Q TK  S+V P D+GPG+S RN
Sbjct: 244 ISAHQPPIAPKFDAPAKGFCVWKAKNSSTGSSTMIAENQATKPVSDVHPPDTGPGRSFRN 303

Query: 176 FKFDTAAILQEIEAVFFA 229
           F+FDT AIL+ +++ F A
Sbjct: 304 FRFDTTAILKAMDSAFSA 321


>emb|CAN75444.1| hypothetical protein VITISV_019659 [Vitis vinifera]
          Length = 318

 Score = 89.4 bits (220), Expect = 4e-16
 Identities = 45/78 (57%), Positives = 55/78 (70%), Gaps = 2/78 (2%)
 Frame = +2

Query: 2   ISAHQPPTTQKSDTFYKGMCVWKAKNSSIGGTGM--ESQQTKHGSEVRPIDSGPGKSLRN 175
           ISAHQPP   K D   KG CVWKAKNSS G + M  E+Q TK  S+V P D+GPG+S RN
Sbjct: 241 ISAHQPPIAPKFDAPAKGFCVWKAKNSSTGSSTMIAENQATKPVSDVHPPDTGPGRSFRN 300

Query: 176 FKFDTAAILQEIEAVFFA 229
           F+FDT AIL+ +++ F A
Sbjct: 301 FRFDTTAILKAMDSAFSA 318


>ref|XP_002311091.1| predicted protein [Populus trichocarpa] gi|222850911|gb|EEE88458.1|
           predicted protein [Populus trichocarpa]
          Length = 322

 Score = 82.4 bits (202), Expect = 5e-14
 Identities = 42/78 (53%), Positives = 53/78 (67%), Gaps = 2/78 (2%)
 Frame = +2

Query: 2   ISAHQPPTTQKSDTFYKGMCVWKAKNSSIGGTG--MESQQTKHGSEVRPIDSGPGKSLRN 175
           IS+HQ P   + D   K MCVWKA+N+SIG +   MES   K GS+  P D GPGKS RN
Sbjct: 245 ISSHQLPVAPRLDMPLKAMCVWKARNNSIGSSTVIMESHLNKPGSDAHPPDMGPGKSFRN 304

Query: 176 FKFDTAAILQEIEAVFFA 229
           F+FDTA+IL+ +E+ F A
Sbjct: 305 FRFDTASILRAMESGFSA 322


>ref|XP_002532755.1| conserved hypothetical protein [Ricinus communis]
           gi|223527506|gb|EEF29632.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 316

 Score = 82.0 bits (201), Expect = 7e-14
 Identities = 42/76 (55%), Positives = 53/76 (69%), Gaps = 2/76 (2%)
 Frame = +2

Query: 2   ISAHQPPTTQKSDTFYKGMCVWKAKNSSIG-GTG-MESQQTKHGSEVRPIDSGPGKSLRN 175
           IS HQPP   + D   KGMC+WKAKN+SIG GT  ME++  K G++  P D+GPGKS R+
Sbjct: 239 ISKHQPPVAPRPDLPLKGMCMWKAKNTSIGSGTQIMEARSMKAGTDSHPPDTGPGKSFRS 298

Query: 176 FKFDTAAILQEIEAVF 223
           F+FD   ILQ +EA F
Sbjct: 299 FRFDIGGILQAMEAGF 314


>ref|XP_002316368.1| predicted protein [Populus trichocarpa] gi|222865408|gb|EEF02539.1|
           predicted protein [Populus trichocarpa]
          Length = 322

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 43/78 (55%), Positives = 53/78 (67%), Gaps = 2/78 (2%)
 Frame = +2

Query: 2   ISAHQPPTTQKSDTFYKGMCVWKAKNSSIG-GTGM-ESQQTKHGSEVRPIDSGPGKSLRN 175
           I +HQPP   + D   K  CVWKAKN+S+G GT + ES  TK   +  P+D GPGKS RN
Sbjct: 245 ILSHQPPAAPRPDMPLKATCVWKAKNTSLGSGTVITESHLTKPVFDAHPLDMGPGKSFRN 304

Query: 176 FKFDTAAILQEIEAVFFA 229
           F+FDTAAILQ +E+ F A
Sbjct: 305 FRFDTAAILQAMESGFSA 322