BLASTX nr result

ID: Coptis23_contig00014165 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014165
         (619 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313970.1| predicted protein [Populus trichocarpa] gi|2...   220   1e-55
ref|XP_002866270.1| hypothetical protein ARALYDRAFT_919046 [Arab...   215   6e-54
ref|NP_200656.2| glucan endo-1,3-beta-glucosidase 9 [Arabidopsis...   213   2e-53
ref|XP_002269108.2| PREDICTED: glucan endo-1,3-beta-glucosidase ...   211   8e-53
emb|CBI28434.3| unnamed protein product [Vitis vinifera]              211   8e-53

>ref|XP_002313970.1| predicted protein [Populus trichocarpa] gi|222850378|gb|EEE87925.1|
           predicted protein [Populus trichocarpa]
          Length = 480

 Score =  220 bits (561), Expect = 1e-55
 Identities = 112/189 (59%), Positives = 127/189 (67%)
 Frame = -1

Query: 568 IVVSSIGVNWGTSASHPLPPDKVVELLKSNGINKVKLFDADPXXXXXXXXXXXXXXXXIP 389
           I V +IGVNWGT++SHPLPPDKVVELLKSN I KVKLFDADP                IP
Sbjct: 17  ITVQAIGVNWGTTSSHPLPPDKVVELLKSNKITKVKLFDADPLVLQALSGSNIGVTVGIP 76

Query: 388 NXXXXXXXXXXXXXXSWVHDNLTRYFSNGGRTVRIEYIAVGDEPFLQSYGKQFQPFLVGA 209
           N              SWVHDN+TRY S+G   VRIEY+AVGDEPF QSYG+Q+ PF++GA
Sbjct: 77  NSMLKSLNSSKKVAESWVHDNVTRYVSSGNSGVRIEYVAVGDEPFQQSYGEQYHPFVIGA 136

Query: 208 LTNIQIALTKAKLDXXXXXXVPCNSDAFLSESGMPSKGHFRPDLNKTMNQLLTFLSKHQS 29
             NIQ AL +  L       VPC+ D F SES +PSKGHFRPDLNKTM +LLTFL+KH S
Sbjct: 137 AMNIQTALARVSLANQVKVVVPCSYDTFQSESSLPSKGHFRPDLNKTMTELLTFLTKHHS 196

Query: 28  PFFINIYPF 2
           PFF  I PF
Sbjct: 197 PFFATISPF 205


>ref|XP_002866270.1| hypothetical protein ARALYDRAFT_919046 [Arabidopsis lyrata subsp.
           lyrata] gi|297312105|gb|EFH42529.1| hypothetical protein
           ARALYDRAFT_919046 [Arabidopsis lyrata subsp. lyrata]
          Length = 480

 Score =  215 bits (547), Expect = 6e-54
 Identities = 113/188 (60%), Positives = 127/188 (67%)
 Frame = -1

Query: 565 VVSSIGVNWGTSASHPLPPDKVVELLKSNGINKVKLFDADPXXXXXXXXXXXXXXXXIPN 386
           +V + GVNWGT ASHPLPP KVVELLKSNGI KVKLFDADP                I N
Sbjct: 22  IVVAFGVNWGTEASHPLPPSKVVELLKSNGIAKVKLFDADPKVLRALSGSNIGVTVGIQN 81

Query: 385 XXXXXXXXXXXXXXSWVHDNLTRYFSNGGRTVRIEYIAVGDEPFLQSYGKQFQPFLVGAL 206
                         SWVHDN+TRYF NGG  VRIEY+AVGDEPFLQSYG Q++PF++GA 
Sbjct: 82  SMLKSLNASVKVAESWVHDNVTRYF-NGGNRVRIEYVAVGDEPFLQSYGNQYRPFVIGAA 140

Query: 205 TNIQIALTKAKLDXXXXXXVPCNSDAFLSESGMPSKGHFRPDLNKTMNQLLTFLSKHQSP 26
            NIQ AL KA L       VP + D+FLSESG PS GHFR DLNKTM +LL+FL+KH SP
Sbjct: 141 MNIQNALAKASLANVVKVVVPSSFDSFLSESGRPSSGHFRADLNKTMIELLSFLTKHHSP 200

Query: 25  FFINIYPF 2
           FF+ I PF
Sbjct: 201 FFVTISPF 208


>ref|NP_200656.2| glucan endo-1,3-beta-glucosidase 9 [Arabidopsis thaliana]
           gi|75170428|sp|Q9FGH4.1|E139_ARATH RecName: Full=Glucan
           endo-1,3-beta-glucosidase 9; AltName:
           Full=(1->3)-beta-glucan endohydrolase 9;
           Short=(1->3)-beta-glucanase 9; AltName:
           Full=Beta-1,3-endoglucanase 9; Short=Beta-1,3-glucanase
           9; Flags: Precursor gi|10177025|dbj|BAB10263.1|
           beta-1,3-glucanase-like [Arabidopsis thaliana]
           gi|28393035|gb|AAO41952.1| putative glycosyl hydrolase
           family 17 protein [Arabidopsis thaliana]
           gi|28827612|gb|AAO50650.1| putative glycosyl hydrolase
           family 17 protein [Arabidopsis thaliana]
           gi|332009675|gb|AED97058.1| glucan
           endo-1,3-beta-glucosidase 9 [Arabidopsis thaliana]
          Length = 476

 Score =  213 bits (542), Expect = 2e-53
 Identities = 111/187 (59%), Positives = 127/187 (67%)
 Frame = -1

Query: 562 VSSIGVNWGTSASHPLPPDKVVELLKSNGINKVKLFDADPXXXXXXXXXXXXXXXXIPNX 383
           V ++G+NWGT ASHPLPP KVVELLKSNGI KVKLFDADP                I N 
Sbjct: 23  VRAVGINWGTEASHPLPPSKVVELLKSNGIVKVKLFDADPKVLRALSGSNIGVTIGIQNS 82

Query: 382 XXXXXXXXXXXXXSWVHDNLTRYFSNGGRTVRIEYIAVGDEPFLQSYGKQFQPFLVGALT 203
                        SWVHDN+TRYF NGG  VRIEY+AVG+EPFLQSYG Q++PF++GA  
Sbjct: 83  MLKSLNASVKVAESWVHDNVTRYF-NGGNRVRIEYVAVGEEPFLQSYGNQYKPFVIGAAM 141

Query: 202 NIQIALTKAKLDXXXXXXVPCNSDAFLSESGMPSKGHFRPDLNKTMNQLLTFLSKHQSPF 23
           NIQ AL KA L       VP + D+FLSESG PS GHFR DLNKTM +LL+FL+KH SPF
Sbjct: 142 NIQNALVKANLANEVKVVVPSSFDSFLSESGRPSSGHFRADLNKTMIELLSFLTKHHSPF 201

Query: 22  FINIYPF 2
           F+ I PF
Sbjct: 202 FVTISPF 208


>ref|XP_002269108.2| PREDICTED: glucan endo-1,3-beta-glucosidase 9-like [Vitis vinifera]
          Length = 485

 Score =  211 bits (537), Expect = 8e-53
 Identities = 110/188 (58%), Positives = 128/188 (68%), Gaps = 2/188 (1%)
 Frame = -1

Query: 559 SSIGVNWGTSASHPLPPDKVVELLKSNGINKVKLFDADPXXXXXXXXXXXXXXXXIPNXX 380
           ++IG+NWGT+ASHPLPP +VVELLK+N I +VKLFDADP                IPN  
Sbjct: 21  TAIGLNWGTAASHPLPPPRVVELLKNNNIARVKLFDADPLVLQALSGSKIAVTVGIPNSM 80

Query: 379 XXXXXXXXXXXXSWVHDNLTRYFSNGGRT--VRIEYIAVGDEPFLQSYGKQFQPFLVGAL 206
                       SWVHDN+TRY S+ GR   VRIEY+AVGDEPFLQSYG QF PF++GA 
Sbjct: 81  LRSLNSSKKAAESWVHDNVTRYVSSSGRGSGVRIEYVAVGDEPFLQSYGDQFHPFVIGAA 140

Query: 205 TNIQIALTKAKLDXXXXXXVPCNSDAFLSESGMPSKGHFRPDLNKTMNQLLTFLSKHQSP 26
           TNIQ AL +A L       VP +SD   SES +PSKGHFR DLNKTM+ LLTFL+KH SP
Sbjct: 141 TNIQTALIRANLASEVKVVVPFSSDTIQSESNLPSKGHFRSDLNKTMSHLLTFLNKHHSP 200

Query: 25  FFINIYPF 2
           FF+NI PF
Sbjct: 201 FFVNISPF 208


>emb|CBI28434.3| unnamed protein product [Vitis vinifera]
          Length = 873

 Score =  211 bits (537), Expect = 8e-53
 Identities = 110/188 (58%), Positives = 128/188 (68%), Gaps = 2/188 (1%)
 Frame = -1

Query: 559 SSIGVNWGTSASHPLPPDKVVELLKSNGINKVKLFDADPXXXXXXXXXXXXXXXXIPNXX 380
           ++IG+NWGT+ASHPLPP +VVELLK+N I +VKLFDADP                IPN  
Sbjct: 21  TAIGLNWGTAASHPLPPPRVVELLKNNNIARVKLFDADPLVLQALSGSKIAVTVGIPNSM 80

Query: 379 XXXXXXXXXXXXSWVHDNLTRYFSNGGRT--VRIEYIAVGDEPFLQSYGKQFQPFLVGAL 206
                       SWVHDN+TRY S+ GR   VRIEY+AVGDEPFLQSYG QF PF++GA 
Sbjct: 81  LRSLNSSKKAAESWVHDNVTRYVSSSGRGSGVRIEYVAVGDEPFLQSYGDQFHPFVIGAA 140

Query: 205 TNIQIALTKAKLDXXXXXXVPCNSDAFLSESGMPSKGHFRPDLNKTMNQLLTFLSKHQSP 26
           TNIQ AL +A L       VP +SD   SES +PSKGHFR DLNKTM+ LLTFL+KH SP
Sbjct: 141 TNIQTALIRANLASEVKVVVPFSSDTIQSESNLPSKGHFRSDLNKTMSHLLTFLNKHHSP 200

Query: 25  FFINIYPF 2
           FF+NI PF
Sbjct: 201 FFVNISPF 208


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