BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014162
         (400 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003527053.1| PREDICTED: pentatricopeptide repeat-containi...   180   1e-43
ref|XP_003523047.1| PREDICTED: pentatricopeptide repeat-containi...   180   1e-43
emb|CBI15289.3| unnamed protein product [Vitis vinifera]              177   8e-43
ref|XP_002266698.1| PREDICTED: pentatricopeptide repeat-containi...   177   8e-43
ref|XP_002511505.1| pentatricopeptide repeat-containing protein,...   172   3e-41

>ref|XP_003527053.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18900-like [Glycine max]
          Length = 882

 Score =  180 bits (456), Expect = 1e-43
 Identities = 88/103 (85%), Positives = 92/103 (89%)
 Frame = -1

Query: 310 LGLNPSLQTYTLLLSCCTDTQYFNDMGQCRELMAVTAHPAHAFLQSMPAAGIDGQNVREH 131
           LGLNPSLQTYTLLLSCCT+ Q   DMG C ELMAV+ HPAHAFLQSMPAAG DGQNVR+H
Sbjct: 660 LGLNPSLQTYTLLLSCCTEAQSPYDMGFCCELMAVSGHPAHAFLQSMPAAGPDGQNVRDH 719

Query: 130 ASSFLDLMHSEDRESKRGLVDAVIDFLHKSGLKEEAGSVWEVA 2
            S FLDLMHSEDRE KRGLVDAV+DFLHKSGLKEEAGSVWEVA
Sbjct: 720 VSKFLDLMHSEDREGKRGLVDAVVDFLHKSGLKEEAGSVWEVA 762


>ref|XP_003523047.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18900-like [Glycine max]
          Length = 879

 Score =  180 bits (456), Expect = 1e-43
 Identities = 88/103 (85%), Positives = 92/103 (89%)
 Frame = -1

Query: 310 LGLNPSLQTYTLLLSCCTDTQYFNDMGQCRELMAVTAHPAHAFLQSMPAAGIDGQNVREH 131
           LGLNPSLQTYTLLLSCCT+ Q   DMG C ELMAV+ HPAHAFLQSMPAAG DGQNVR+H
Sbjct: 657 LGLNPSLQTYTLLLSCCTEAQSPYDMGFCCELMAVSGHPAHAFLQSMPAAGPDGQNVRDH 716

Query: 130 ASSFLDLMHSEDRESKRGLVDAVIDFLHKSGLKEEAGSVWEVA 2
            S FLDLMHSEDRE KRGLVDAV+DFLHKSGLKEEAGSVWEVA
Sbjct: 717 VSKFLDLMHSEDREGKRGLVDAVVDFLHKSGLKEEAGSVWEVA 759


>emb|CBI15289.3| unnamed protein product [Vitis vinifera]
          Length = 793

 Score =  177 bits (449), Expect = 8e-43
 Identities = 87/104 (83%), Positives = 91/104 (87%)
 Frame = -1

Query: 313 RLGLNPSLQTYTLLLSCCTDTQYFNDMGQCRELMAVTAHPAHAFLQSMPAAGIDGQNVRE 134
           RLGL PSLQTYTLLLSCCT+ +   DMG C ELMAVT HPAH FL SMPAAG DGQNVR+
Sbjct: 661 RLGLQPSLQTYTLLLSCCTEARSSFDMGFCGELMAVTGHPAHMFLLSMPAAGPDGQNVRD 720

Query: 133 HASSFLDLMHSEDRESKRGLVDAVIDFLHKSGLKEEAGSVWEVA 2
           H S FLDLMHSEDRESKRGLVDAV+DFLHKSGLKEEAGSVWEVA
Sbjct: 721 HVSKFLDLMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVA 764


>ref|XP_002266698.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74750
           [Vitis vinifera]
          Length = 875

 Score =  177 bits (449), Expect = 8e-43
 Identities = 87/104 (83%), Positives = 91/104 (87%)
 Frame = -1

Query: 313 RLGLNPSLQTYTLLLSCCTDTQYFNDMGQCRELMAVTAHPAHAFLQSMPAAGIDGQNVRE 134
           RLGL PSLQTYTLLLSCCT+ +   DMG C ELMAVT HPAH FL SMPAAG DGQNVR+
Sbjct: 652 RLGLQPSLQTYTLLLSCCTEARSSFDMGFCGELMAVTGHPAHMFLLSMPAAGPDGQNVRD 711

Query: 133 HASSFLDLMHSEDRESKRGLVDAVIDFLHKSGLKEEAGSVWEVA 2
           H S FLDLMHSEDRESKRGLVDAV+DFLHKSGLKEEAGSVWEVA
Sbjct: 712 HVSKFLDLMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVA 755


>ref|XP_002511505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550620|gb|EEF52107.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 876

 Score =  172 bits (435), Expect = 3e-41
 Identities = 85/103 (82%), Positives = 91/103 (88%)
 Frame = -1

Query: 310 LGLNPSLQTYTLLLSCCTDTQYFNDMGQCRELMAVTAHPAHAFLQSMPAAGIDGQNVREH 131
           LGLNPSLQTYTLLLSCCT+ +   DMG   ELMAVT HPAH FL S+P+AG DGQNVR+H
Sbjct: 654 LGLNPSLQTYTLLLSCCTEARSPYDMGIYCELMAVTGHPAHMFLLSLPSAGPDGQNVRDH 713

Query: 130 ASSFLDLMHSEDRESKRGLVDAVIDFLHKSGLKEEAGSVWEVA 2
           AS FLDLMHSEDRESKRGLVDAV+DFLHKSGLKEEAGSVWEVA
Sbjct: 714 ASKFLDLMHSEDRESKRGLVDAVVDFLHKSGLKEEAGSVWEVA 756