BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014161
         (500 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003527053.1| PREDICTED: pentatricopeptide repeat-containi...   152   4e-35
ref|XP_003523047.1| PREDICTED: pentatricopeptide repeat-containi...   151   5e-35
ref|XP_002511505.1| pentatricopeptide repeat-containing protein,...   147   7e-34
ref|XP_002321537.1| predicted protein [Populus trichocarpa] gi|2...   147   7e-34
ref|XP_004154991.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   145   3e-33

>ref|XP_003527053.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18900-like [Glycine max]
          Length = 882

 Score =  152 bits (383), Expect = 4e-35
 Identities = 70/79 (88%), Positives = 76/79 (96%)
 Frame = -2

Query: 499 SVWEVAAQKNVYPDAVREKSSCYWLINLHVMSDGTAITALSRPLAWFRRQMLISGIGPMR 320
           SVWEVAAQKNVYPDA+REKS+CYWLINLHVMSDGTA+TALSR LAWFRRQML SG+GP R
Sbjct: 757 SVWEVAAQKNVYPDAIREKSTCYWLINLHVMSDGTAVTALSRTLAWFRRQMLASGVGPNR 816

Query: 319 IDIVTGWGRRSRVTGSSLL 263
           IDI+TGWGRRSRVTGSSL+
Sbjct: 817 IDIITGWGRRSRVTGSSLV 835


>ref|XP_003523047.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18900-like [Glycine max]
          Length = 879

 Score =  151 bits (382), Expect = 5e-35
 Identities = 71/79 (89%), Positives = 76/79 (96%)
 Frame = -2

Query: 499 SVWEVAAQKNVYPDAVREKSSCYWLINLHVMSDGTAITALSRPLAWFRRQMLISGIGPMR 320
           SVWEVAAQKNVYPDAV+EKS+CYWLINLHVMSDGTA+TALSR LAWFRRQML SG+GP R
Sbjct: 754 SVWEVAAQKNVYPDAVKEKSTCYWLINLHVMSDGTAVTALSRTLAWFRRQMLASGVGPNR 813

Query: 319 IDIVTGWGRRSRVTGSSLL 263
           IDIVTGWGRRSRVTGSSL+
Sbjct: 814 IDIVTGWGRRSRVTGSSLV 832


>ref|XP_002511505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550620|gb|EEF52107.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 876

 Score =  147 bits (372), Expect = 7e-34
 Identities = 68/79 (86%), Positives = 75/79 (94%)
 Frame = -2

Query: 499 SVWEVAAQKNVYPDAVREKSSCYWLINLHVMSDGTAITALSRPLAWFRRQMLISGIGPMR 320
           SVWEVAAQ+NVYPDAV+EK SCYWLINLHVMSDGTA+TALSR LAWFR+QML+SGI P R
Sbjct: 751 SVWEVAAQRNVYPDAVKEKGSCYWLINLHVMSDGTAVTALSRTLAWFRQQMLVSGISPSR 810

Query: 319 IDIVTGWGRRSRVTGSSLL 263
           IDIVTGWGRRSRVTGSS++
Sbjct: 811 IDIVTGWGRRSRVTGSSMV 829


>ref|XP_002321537.1| predicted protein [Populus trichocarpa] gi|222868533|gb|EEF05664.1|
           predicted protein [Populus trichocarpa]
          Length = 834

 Score =  147 bits (372), Expect = 7e-34
 Identities = 68/79 (86%), Positives = 76/79 (96%)
 Frame = -2

Query: 499 SVWEVAAQKNVYPDAVREKSSCYWLINLHVMSDGTAITALSRPLAWFRRQMLISGIGPMR 320
           SVWE+AAQ+NVYPDAV+EKSSCYWLINLHVMS+GTA+TALSR LAWFRRQML+SG+ P R
Sbjct: 709 SVWEIAAQRNVYPDAVKEKSSCYWLINLHVMSEGTAVTALSRTLAWFRRQMLVSGVIPSR 768

Query: 319 IDIVTGWGRRSRVTGSSLL 263
           IDIVTGWGRRSRVTGSSL+
Sbjct: 769 IDIVTGWGRRSRVTGSSLV 787


>ref|XP_004154991.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g18900-like [Cucumis sativus]
          Length = 874

 Score =  145 bits (366), Expect = 3e-33
 Identities = 66/78 (84%), Positives = 74/78 (94%)
 Frame = -2

Query: 496 VWEVAAQKNVYPDAVREKSSCYWLINLHVMSDGTAITALSRPLAWFRRQMLISGIGPMRI 317
           VWE A QKNVYPDAV+EKSSCYWLINLHVMSDGTA+TALSR LAWFR+Q+L+SG+GP RI
Sbjct: 750 VWEAAMQKNVYPDAVKEKSSCYWLINLHVMSDGTAVTALSRTLAWFRQQLLLSGVGPSRI 809

Query: 316 DIVTGWGRRSRVTGSSLL 263
           DIVTGWGRRS+VTGSSL+
Sbjct: 810 DIVTGWGRRSKVTGSSLV 827