BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014158
         (1457 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containi...   368   2e-99
emb|CBI21003.3| unnamed protein product [Vitis vinifera]              368   2e-99
ref|XP_002309609.1| predicted protein [Populus trichocarpa] gi|2...   354   4e-95
ref|XP_002515553.1| pentatricopeptide repeat-containing protein,...   348   3e-93
ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containi...   346   1e-92

>ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
            mitochondrial-like [Vitis vinifera]
          Length = 877

 Score =  368 bits (945), Expect = 2e-99
 Identities = 182/300 (60%), Positives = 235/300 (78%), Gaps = 1/300 (0%)
 Frame = +1

Query: 1    TDLTFNTIINGLCKAGRTHEASEILKNFMKDGFTPTCMTYNSIINGFIKEGSVSTALATY 180
            TD TFNTIINGLCK G+  EA + LKNF+++GF P+CMTYNSI++GFIKEG++ +ALA Y
Sbjct: 573  TDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVY 632

Query: 181  WEMCESGISSSVVTCTSLIDGCCKSNCLDLALKMLGEMKSRGLQVEVVAYYALIDGFCKK 360
             EMCE G+S +VVT TSLI+G CKSN +DLALK   EM+ +GL+++V AY ALIDGFCK+
Sbjct: 633  REMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKR 692

Query: 361  GYMRGAQALFNELGQVGLTPNTIIYNCLIGGFKNV-NMNEAISLYKRMGKEGLSCDSKTY 537
              M  AQ LF EL +VGL+PN I+YN +I GF+++ NM  A+  YK+M  + + CD  TY
Sbjct: 693  RDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTY 752

Query: 538  STLMDGSLKAGNVQFASELYAEMIAKGIKPDVNTCTALVNGVRKAGQLEDARKVLEELDR 717
            +TL+DG LK G + FAS+LY EM++KGI PD+ T   LVNG+   GQLE+ARK+LEE+DR
Sbjct: 753  TTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDR 812

Query: 718  KKIPPSVLIYNILIAGYFKKGNIEEAFRMHDEMLDRGLVPNDATLDILVNSKFEENVSNS 897
            K + PSVLIYN LIAGYF++GN++EAF +HDEMLDRGLVP+D T DIL+N KF+ + S S
Sbjct: 813  KNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFKGDRSLS 872



 Score =  149 bits (375), Expect = 2e-33
 Identities = 88/290 (30%), Positives = 147/290 (50%), Gaps = 1/290 (0%)
 Frame = +1

Query: 19   TIINGLCKAGRTHEASEILKNFMKDGFTPTCMTYNSIINGFIKEGSVSTALATYWEMCES 198
            +++ G C  G    A  +     +DG  P  +TY+ +I G    G++  A   Y +M  +
Sbjct: 370  SLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLN 429

Query: 199  GISSSVVTCTSLIDGCCKSNCLDLALKMLGEMKSRGLQVEVVAYYALIDGFCKKGYMRGA 378
            GI  SV    SL+ G  K+   + A K+  E    G+   +  Y  ++   CK G M  A
Sbjct: 430  GIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGV-ANIFTYNIMMSWLCKGGKMDEA 488

Query: 379  QALFNELGQVGLTPNTIIYNCLI-GGFKNVNMNEAISLYKRMGKEGLSCDSKTYSTLMDG 555
             +L + +   G+ PN + YN +I G  +  NM+ A S++  M    L  +  TYS L+DG
Sbjct: 489  CSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDG 548

Query: 556  SLKAGNVQFASELYAEMIAKGIKPDVNTCTALVNGVRKAGQLEDARKVLEELDRKKIPPS 735
            + K G+ + A +L+ +M++  I P   T   ++NG+ K GQ+ +AR  L+    +   PS
Sbjct: 549  NFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPS 608

Query: 736  VLIYNILIAGYFKKGNIEEAFRMHDEMLDRGLVPNDATLDILVNSKFEEN 885
             + YN ++ G+ K+GNI+ A  ++ EM + G+ PN  T   L+N   + N
Sbjct: 609  CMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSN 658



 Score =  147 bits (372), Expect = 5e-33
 Identities = 83/292 (28%), Positives = 157/292 (53%), Gaps = 1/292 (0%)
 Frame = +1

Query: 10   TFNTIINGLCKAGRTHEASEILKNFMKDGFTPTCMTYNSIINGFIKEGSVSTALATYWEM 189
            T+N +++ LCK G+  EA  +L N +  G  P  ++YN +I G  ++G++  A + + +M
Sbjct: 471  TYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDM 530

Query: 190  CESGISSSVVTCTSLIDGCCKSNCLDLALKMLGEMKSRGLQVEVVAYYALIDGFCKKGYM 369
                +  +VVT + LIDG  K    + AL +  +M S  +      +  +I+G CK G M
Sbjct: 531  LARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQM 590

Query: 370  RGAQALFNELGQVGLTPNTIIYNCLIGGF-KNVNMNEAISLYKRMGKEGLSCDSKTYSTL 546
              A+       + G  P+ + YN ++ GF K  N++ A+++Y+ M + G+S +  TY++L
Sbjct: 591  SEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSL 650

Query: 547  MDGSLKAGNVQFASELYAEMIAKGIKPDVNTCTALVNGVRKAGQLEDARKVLEELDRKKI 726
            ++G  K+  +  A +   EM  KG++ DV   +AL++G  K   +E A+ +  EL    +
Sbjct: 651  INGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGL 710

Query: 727  PPSVLIYNILIAGYFKKGNIEEAFRMHDEMLDRGLVPNDATLDILVNSKFEE 882
             P+ ++YN +I+G+    N+E A   + +M++  +  +  T   L++   +E
Sbjct: 711  SPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKE 762



 Score =  138 bits (347), Expect = 4e-30
 Identities = 82/288 (28%), Positives = 146/288 (50%), Gaps = 3/288 (1%)
 Frame = +1

Query: 13   FNTIINGLCKAGRTHEASEILKNFMKDGFTPTCMTYNSIINGFIKEGSVSTALATYWEMC 192
            ++ II  +CK   ++   E+L+   + G+ P+  T+ S+I   + +G++  AL    EM 
Sbjct: 298  YSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMI 357

Query: 193  ESGISSSVVTCTSLIDGCCKSNCLDLALKMLGEMKSRGLQVEVVAYYALIDGFCKKGYMR 372
              G   ++V  TSL+ G C    LD AL +  ++   GL    V Y  LI+G C  G + 
Sbjct: 358  NCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIE 417

Query: 373  GAQALFNELGQVGLTPNTIIYNCLIGGFKNVNMNEAISLYKRMGKEGLSC---DSKTYST 543
             A  L+ ++   G+ P+    N L+ G+    + E  S   ++  E + C   +  TY+ 
Sbjct: 418  KASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEAS---KLFDEAVDCGVANIFTYNI 474

Query: 544  LMDGSLKAGNVQFASELYAEMIAKGIKPDVNTCTALVNGVRKAGQLEDARKVLEELDRKK 723
            +M    K G +  A  L   M+ +G+ P+V +   ++ G  + G ++ A  V  ++  + 
Sbjct: 475  MMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARD 534

Query: 724  IPPSVLIYNILIAGYFKKGNIEEAFRMHDEMLDRGLVPNDATLDILVN 867
            + P+V+ Y+ILI G FKKG+ E+A  + D+ML   + P D T + ++N
Sbjct: 535  LKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIIN 582



 Score =  133 bits (334), Expect = 1e-28
 Identities = 88/295 (29%), Positives = 154/295 (52%), Gaps = 1/295 (0%)
 Frame = +1

Query: 10   TFNTIINGLCKAGRTHEASEILKNFMKDGFTPTCMTYNSIINGFIKEGSVSTALATYWEM 189
            T + ++    K GR  EA E  +   + G       Y+ II    K+ + +  L    EM
Sbjct: 262  TVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEM 321

Query: 190  CESGISSSVVTCTSLIDGCCKSNCLDLALKMLGEMKSRGLQVEVVAYYALIDGFCKKGYM 369
             E G   S  T TS+I  C     +  AL++  EM + G  + +V   +L+ G+C +G +
Sbjct: 322  KERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNL 381

Query: 370  RGAQALFNELGQVGLTPNTIIYNCLIGGFKNV-NMNEAISLYKRMGKEGLSCDSKTYSTL 546
              A  LFN++ + GL PN + Y+ LI G  N  N+ +A  LY +M   G+       ++L
Sbjct: 382  DSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSL 441

Query: 547  MDGSLKAGNVQFASELYAEMIAKGIKPDVNTCTALVNGVRKAGQLEDARKVLEELDRKKI 726
            + G LKA   + AS+L+ E +  G+  ++ T   +++ + K G++++A  +L+ +  + +
Sbjct: 442  LRGYLKAPLWEEASKLFDEAVDCGV-ANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGM 500

Query: 727  PPSVLIYNILIAGYFKKGNIEEAFRMHDEMLDRGLVPNDATLDILVNSKFEENVS 891
             P+V+ YN +I G+ +KGN++ A  +  +ML R L PN  T  IL++  F++  S
Sbjct: 501  VPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDS 555



 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 42/165 (25%), Positives = 73/165 (44%), Gaps = 1/165 (0%)
 Frame = +1

Query: 337 LIDGFCKKGYMRGAQALFNELGQVGLTPNTIIYNCLIGGFKNVNM-NEAISLYKRMGKEG 513
           L++ + +   +  A   FN +    + P     N L+      NM  E   LY +M   G
Sbjct: 196 LLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRG 255

Query: 514 LSCDSKTYSTLMDGSLKAGNVQFASELYAEMIAKGIKPDVNTCTALVNGVRKAGQLEDAR 693
           +  D  T   ++   LK G V+ A E + E   +G+K D    + ++  V K        
Sbjct: 256 IYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGL 315

Query: 694 KVLEELDRKKIPPSVLIYNILIAGYFKKGNIEEAFRMHDEMLDRG 828
           ++LEE+  +   PS   +  +I     +GN+ EA R+ +EM++ G
Sbjct: 316 ELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCG 360


>emb|CBI21003.3| unnamed protein product [Vitis vinifera]
          Length = 837

 Score =  368 bits (945), Expect = 2e-99
 Identities = 182/300 (60%), Positives = 235/300 (78%), Gaps = 1/300 (0%)
 Frame = +1

Query: 1    TDLTFNTIINGLCKAGRTHEASEILKNFMKDGFTPTCMTYNSIINGFIKEGSVSTALATY 180
            TD TFNTIINGLCK G+  EA + LKNF+++GF P+CMTYNSI++GFIKEG++ +ALA Y
Sbjct: 533  TDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVY 592

Query: 181  WEMCESGISSSVVTCTSLIDGCCKSNCLDLALKMLGEMKSRGLQVEVVAYYALIDGFCKK 360
             EMCE G+S +VVT TSLI+G CKSN +DLALK   EM+ +GL+++V AY ALIDGFCK+
Sbjct: 593  REMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKR 652

Query: 361  GYMRGAQALFNELGQVGLTPNTIIYNCLIGGFKNV-NMNEAISLYKRMGKEGLSCDSKTY 537
              M  AQ LF EL +VGL+PN I+YN +I GF+++ NM  A+  YK+M  + + CD  TY
Sbjct: 653  RDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTY 712

Query: 538  STLMDGSLKAGNVQFASELYAEMIAKGIKPDVNTCTALVNGVRKAGQLEDARKVLEELDR 717
            +TL+DG LK G + FAS+LY EM++KGI PD+ T   LVNG+   GQLE+ARK+LEE+DR
Sbjct: 713  TTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDR 772

Query: 718  KKIPPSVLIYNILIAGYFKKGNIEEAFRMHDEMLDRGLVPNDATLDILVNSKFEENVSNS 897
            K + PSVLIYN LIAGYF++GN++EAF +HDEMLDRGLVP+D T DIL+N KF+ + S S
Sbjct: 773  KNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFKGDRSLS 832



 Score =  149 bits (375), Expect = 2e-33
 Identities = 88/290 (30%), Positives = 147/290 (50%), Gaps = 1/290 (0%)
 Frame = +1

Query: 19   TIINGLCKAGRTHEASEILKNFMKDGFTPTCMTYNSIINGFIKEGSVSTALATYWEMCES 198
            +++ G C  G    A  +     +DG  P  +TY+ +I G    G++  A   Y +M  +
Sbjct: 330  SLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLN 389

Query: 199  GISSSVVTCTSLIDGCCKSNCLDLALKMLGEMKSRGLQVEVVAYYALIDGFCKKGYMRGA 378
            GI  SV    SL+ G  K+   + A K+  E    G+   +  Y  ++   CK G M  A
Sbjct: 390  GIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGV-ANIFTYNIMMSWLCKGGKMDEA 448

Query: 379  QALFNELGQVGLTPNTIIYNCLI-GGFKNVNMNEAISLYKRMGKEGLSCDSKTYSTLMDG 555
             +L + +   G+ PN + YN +I G  +  NM+ A S++  M    L  +  TYS L+DG
Sbjct: 449  CSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDG 508

Query: 556  SLKAGNVQFASELYAEMIAKGIKPDVNTCTALVNGVRKAGQLEDARKVLEELDRKKIPPS 735
            + K G+ + A +L+ +M++  I P   T   ++NG+ K GQ+ +AR  L+    +   PS
Sbjct: 509  NFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPS 568

Query: 736  VLIYNILIAGYFKKGNIEEAFRMHDEMLDRGLVPNDATLDILVNSKFEEN 885
             + YN ++ G+ K+GNI+ A  ++ EM + G+ PN  T   L+N   + N
Sbjct: 569  CMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSN 618



 Score =  147 bits (372), Expect = 5e-33
 Identities = 83/292 (28%), Positives = 157/292 (53%), Gaps = 1/292 (0%)
 Frame = +1

Query: 10   TFNTIINGLCKAGRTHEASEILKNFMKDGFTPTCMTYNSIINGFIKEGSVSTALATYWEM 189
            T+N +++ LCK G+  EA  +L N +  G  P  ++YN +I G  ++G++  A + + +M
Sbjct: 431  TYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDM 490

Query: 190  CESGISSSVVTCTSLIDGCCKSNCLDLALKMLGEMKSRGLQVEVVAYYALIDGFCKKGYM 369
                +  +VVT + LIDG  K    + AL +  +M S  +      +  +I+G CK G M
Sbjct: 491  LARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQM 550

Query: 370  RGAQALFNELGQVGLTPNTIIYNCLIGGF-KNVNMNEAISLYKRMGKEGLSCDSKTYSTL 546
              A+       + G  P+ + YN ++ GF K  N++ A+++Y+ M + G+S +  TY++L
Sbjct: 551  SEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSL 610

Query: 547  MDGSLKAGNVQFASELYAEMIAKGIKPDVNTCTALVNGVRKAGQLEDARKVLEELDRKKI 726
            ++G  K+  +  A +   EM  KG++ DV   +AL++G  K   +E A+ +  EL    +
Sbjct: 611  INGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGL 670

Query: 727  PPSVLIYNILIAGYFKKGNIEEAFRMHDEMLDRGLVPNDATLDILVNSKFEE 882
             P+ ++YN +I+G+    N+E A   + +M++  +  +  T   L++   +E
Sbjct: 671  SPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKE 722



 Score =  138 bits (347), Expect = 4e-30
 Identities = 82/288 (28%), Positives = 146/288 (50%), Gaps = 3/288 (1%)
 Frame = +1

Query: 13   FNTIINGLCKAGRTHEASEILKNFMKDGFTPTCMTYNSIINGFIKEGSVSTALATYWEMC 192
            ++ II  +CK   ++   E+L+   + G+ P+  T+ S+I   + +G++  AL    EM 
Sbjct: 258  YSIIIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMI 317

Query: 193  ESGISSSVVTCTSLIDGCCKSNCLDLALKMLGEMKSRGLQVEVVAYYALIDGFCKKGYMR 372
              G   ++V  TSL+ G C    LD AL +  ++   GL    V Y  LI+G C  G + 
Sbjct: 318  NCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIE 377

Query: 373  GAQALFNELGQVGLTPNTIIYNCLIGGFKNVNMNEAISLYKRMGKEGLSC---DSKTYST 543
             A  L+ ++   G+ P+    N L+ G+    + E  S   ++  E + C   +  TY+ 
Sbjct: 378  KASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEAS---KLFDEAVDCGVANIFTYNI 434

Query: 544  LMDGSLKAGNVQFASELYAEMIAKGIKPDVNTCTALVNGVRKAGQLEDARKVLEELDRKK 723
            +M    K G +  A  L   M+ +G+ P+V +   ++ G  + G ++ A  V  ++  + 
Sbjct: 435  MMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARD 494

Query: 724  IPPSVLIYNILIAGYFKKGNIEEAFRMHDEMLDRGLVPNDATLDILVN 867
            + P+V+ Y+ILI G FKKG+ E+A  + D+ML   + P D T + ++N
Sbjct: 495  LKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIIN 542



 Score =  133 bits (334), Expect = 1e-28
 Identities = 88/295 (29%), Positives = 154/295 (52%), Gaps = 1/295 (0%)
 Frame = +1

Query: 10   TFNTIINGLCKAGRTHEASEILKNFMKDGFTPTCMTYNSIINGFIKEGSVSTALATYWEM 189
            T + ++    K GR  EA E  +   + G       Y+ II    K+ + +  L    EM
Sbjct: 222  TVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEM 281

Query: 190  CESGISSSVVTCTSLIDGCCKSNCLDLALKMLGEMKSRGLQVEVVAYYALIDGFCKKGYM 369
             E G   S  T TS+I  C     +  AL++  EM + G  + +V   +L+ G+C +G +
Sbjct: 282  KERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNL 341

Query: 370  RGAQALFNELGQVGLTPNTIIYNCLIGGFKNV-NMNEAISLYKRMGKEGLSCDSKTYSTL 546
              A  LFN++ + GL PN + Y+ LI G  N  N+ +A  LY +M   G+       ++L
Sbjct: 342  DSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSL 401

Query: 547  MDGSLKAGNVQFASELYAEMIAKGIKPDVNTCTALVNGVRKAGQLEDARKVLEELDRKKI 726
            + G LKA   + AS+L+ E +  G+  ++ T   +++ + K G++++A  +L+ +  + +
Sbjct: 402  LRGYLKAPLWEEASKLFDEAVDCGV-ANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGM 460

Query: 727  PPSVLIYNILIAGYFKKGNIEEAFRMHDEMLDRGLVPNDATLDILVNSKFEENVS 891
             P+V+ YN +I G+ +KGN++ A  +  +ML R L PN  T  IL++  F++  S
Sbjct: 461  VPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDS 515



 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 42/165 (25%), Positives = 73/165 (44%), Gaps = 1/165 (0%)
 Frame = +1

Query: 337 LIDGFCKKGYMRGAQALFNELGQVGLTPNTIIYNCLIGGFKNVNM-NEAISLYKRMGKEG 513
           L++ + +   +  A   FN +    + P     N L+      NM  E   LY +M   G
Sbjct: 156 LLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRG 215

Query: 514 LSCDSKTYSTLMDGSLKAGNVQFASELYAEMIAKGIKPDVNTCTALVNGVRKAGQLEDAR 693
           +  D  T   ++   LK G V+ A E + E   +G+K D    + ++  V K        
Sbjct: 216 IYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGL 275

Query: 694 KVLEELDRKKIPPSVLIYNILIAGYFKKGNIEEAFRMHDEMLDRG 828
           ++LEE+  +   PS   +  +I     +GN+ EA R+ +EM++ G
Sbjct: 276 ELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCG 320


>ref|XP_002309609.1| predicted protein [Populus trichocarpa] gi|222855585|gb|EEE93132.1|
            predicted protein [Populus trichocarpa]
          Length = 841

 Score =  354 bits (908), Expect = 4e-95
 Identities = 171/302 (56%), Positives = 235/302 (77%), Gaps = 1/302 (0%)
 Frame = +1

Query: 1    TDLTFNTIINGLCKAGRTHEASEILKNFMKDGFTPTCMTYNSIINGFIKEGSVSTALATY 180
            +D T N IINGLCKAGRT E+ + LK  +++GF PTCMTYN II+GF+KEGSV++ALA Y
Sbjct: 537  SDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVY 596

Query: 181  WEMCESGISSSVVTCTSLIDGCCKSNCLDLALKMLGEMKSRGLQVEVVAYYALIDGFCKK 360
             EMC+ G+S +V T T+LI+G CKSN +DLALK++ EMK++G++++V  Y ALIDGFC+K
Sbjct: 597  TEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRK 656

Query: 361  GYMRGAQALFNELGQVGLTPNTIIYNCLIGGFKNV-NMNEAISLYKRMGKEGLSCDSKTY 537
            G M  A  L +EL +VGL+PN ++Y+ +I GF+ + NM  A+ L+KRM  EG+ CD + Y
Sbjct: 657  GDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIY 716

Query: 538  STLMDGSLKAGNVQFASELYAEMIAKGIKPDVNTCTALVNGVRKAGQLEDARKVLEELDR 717
            +TL+ G LK G + FASELYAEM+AKGI PD+ T + L++G+   GQLE+A+K+LE++DR
Sbjct: 717  TTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDR 776

Query: 718  KKIPPSVLIYNILIAGYFKKGNIEEAFRMHDEMLDRGLVPNDATLDILVNSKFEENVSNS 897
            K + P+V IYN LI G+FK+GN++EAFR+H+EMLD+GLVP+D T DILVN K ++    S
Sbjct: 777  KCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYDILVNGKVKDGNLFS 836

Query: 898  GA 903
            GA
Sbjct: 837  GA 838



 Score =  163 bits (412), Expect = 1e-37
 Identities = 85/275 (30%), Positives = 155/275 (56%), Gaps = 1/275 (0%)
 Frame = +1

Query: 10   TFNTIINGLCKAGRTHEASEILKNFMKDGFTPTCMTYNSIINGFIKEGSVSTALATYWEM 189
            T+N++++ LCK G+  EA  I +  ++ G  P+ ++YN++I G  ++G + +A   + EM
Sbjct: 435  TYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEM 494

Query: 190  CESGISSSVVTCTSLIDGCCKSNCLDLALKMLGEMKSRGLQVEVVAYYALIDGFCKKGYM 369
             E G+  +++T + L+DG  K    + A  +   M+   +         +I+G CK G  
Sbjct: 495  LEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRT 554

Query: 370  RGAQALFNELGQVGLTPNTIIYNCLIGGF-KNVNMNEAISLYKRMGKEGLSCDSKTYSTL 546
              +Q    +L Q G  P  + YNC+I GF K  ++N A+++Y  M K G+S +  TY+ L
Sbjct: 555  SESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNL 614

Query: 547  MDGSLKAGNVQFASELYAEMIAKGIKPDVNTCTALVNGVRKAGQLEDARKVLEELDRKKI 726
            ++G  K+ N+  A ++  EM  KGI+ DV    AL++G  + G + +A ++L EL    +
Sbjct: 615  INGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGL 674

Query: 727  PPSVLIYNILIAGYFKKGNIEEAFRMHDEMLDRGL 831
             P+ ++Y+ +I+G+ K  N+E A  +H  M++ G+
Sbjct: 675  SPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGI 709



 Score =  149 bits (377), Expect = 1e-33
 Identities = 90/290 (31%), Positives = 153/290 (52%), Gaps = 1/290 (0%)
 Frame = +1

Query: 19   TIINGLCKAGRTHEASEILKNFMKDGFTPTCMTYNSIINGFIKEGSVSTALATYWEMCES 198
            T++ G CK G    A E+     ++G  P  +TY  II    K G++  A   Y +M   
Sbjct: 334  TLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNK 393

Query: 199  GISSSVVTCTSLIDGCCKSNCLDLALKMLGEMKSRGLQVEVVAYYALIDGFCKKGYMRGA 378
             IS +V    SLI G  K+   + A K+  E  + G+   V  Y +L+   CK+G M  A
Sbjct: 394  DISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGI-ANVFTYNSLLSWLCKEGKMSEA 452

Query: 379  QALFNELGQVGLTPNTIIYNCLI-GGFKNVNMNEAISLYKRMGKEGLSCDSKTYSTLMDG 555
             +++ ++ + G+ P+ + YN +I G  +  +M+ A  ++  M ++GL  +  TYS LMDG
Sbjct: 453  CSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDG 512

Query: 556  SLKAGNVQFASELYAEMIAKGIKPDVNTCTALVNGVRKAGQLEDARKVLEELDRKKIPPS 735
              K G+ ++A  LY  M  + I P   TC  ++NG+ KAG+  +++  L++L ++   P+
Sbjct: 513  YFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPT 572

Query: 736  VLIYNILIAGYFKKGNIEEAFRMHDEMLDRGLVPNDATLDILVNSKFEEN 885
             + YN +I G+ K+G++  A  ++ EM   G+ PN  T   L+N   + N
Sbjct: 573  CMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSN 622



 Score =  145 bits (366), Expect = 3e-32
 Identities = 81/288 (28%), Positives = 149/288 (51%), Gaps = 3/288 (1%)
 Frame = +1

Query: 13   FNTIINGLCKAGRTHEASEILKNFMKDGFTPTCMTYNSIINGFIKEGSVSTALATYWEMC 192
            ++ +I  +CK   +  A  +L+     G+ P  + +  +I   +K+G +  A+    EM 
Sbjct: 262  YSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEML 321

Query: 193  ESGISSSVVTCTSLIDGCCKSNCLDLALKMLGEMKSRGLQVEVVAYYALIDGFCKKGYMR 372
              G   +VV  T+L+ G CK   LD AL++  +M   G+    V Y  +I+  CK G M 
Sbjct: 322  SCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMD 381

Query: 373  GAQALFNELGQVGLTPNTIIYNCLIGGFKNVNMNEAISLYKRMGKEGLSC---DSKTYST 543
             A  ++N++    ++P     N LI G+      E  S   ++  E ++C   +  TY++
Sbjct: 382  KAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEAS---KLFDEAVACGIANVFTYNS 438

Query: 544  LMDGSLKAGNVQFASELYAEMIAKGIKPDVNTCTALVNGVRKAGQLEDARKVLEELDRKK 723
            L+    K G +  A  ++ +M+ KG++P V +   ++ G  + G ++ A  V  E+  K 
Sbjct: 439  LLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKG 498

Query: 724  IPPSVLIYNILIAGYFKKGNIEEAFRMHDEMLDRGLVPNDATLDILVN 867
            + P+++ Y++L+ GYFKKG+ E AF ++D M    + P+D T +I++N
Sbjct: 499  LKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIIN 546



 Score =  137 bits (344), Expect = 9e-30
 Identities = 89/292 (30%), Positives = 156/292 (53%), Gaps = 1/292 (0%)
 Frame = +1

Query: 10   TFNTIINGLCKAGRTHEASEILKNFMKDGFTPTCMTYNSIINGFIKEGSVSTALATYWEM 189
            T + +I    + G+  EA    +     G       Y+ +I    K+     AL    EM
Sbjct: 226  TISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCKKPDSVAALGLLREM 285

Query: 190  CESGISSSVVTCTSLIDGCCKSNCLDLALKMLGEMKSRGLQVEVVAYYALIDGFCKKGYM 369
             + G     V  T +I  C K   +  A+K+ GEM S G  + VV    L+ G+CK+G +
Sbjct: 286  RDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGDL 345

Query: 370  RGAQALFNELGQVGLTPNTIIYNCLIGG-FKNVNMNEAISLYKRMGKEGLSCDSKTYSTL 546
              A  LF+++ + G+ PN + Y  +I    KN NM++A  +Y +M  + +S      ++L
Sbjct: 346  DSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSL 405

Query: 547  MDGSLKAGNVQFASELYAEMIAKGIKPDVNTCTALVNGVRKAGQLEDARKVLEELDRKKI 726
            + G LKA + + AS+L+ E +A GI  +V T  +L++ + K G++ +A  + E++ RK +
Sbjct: 406  IRGYLKARSPEEASKLFDEAVACGI-ANVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGV 464

Query: 727  PPSVLIYNILIAGYFKKGNIEEAFRMHDEMLDRGLVPNDATLDILVNSKFEE 882
             PSV+ YN +I G+ ++G+++ A  +  EML++GL PN  T  +L++  F++
Sbjct: 465  RPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKK 516



 Score = 65.5 bits (158), Expect = 3e-08
 Identities = 49/212 (23%), Positives = 92/212 (43%), Gaps = 36/212 (16%)
 Frame = +1

Query: 337 LIDGFCKKGYMRGAQALFNELGQVGLTPNTIIYNCLIGGF-KNVNMNEAISLYKRMGKEG 513
           L++ + K   +  A   FN L +  + P   + N  +    KN  + EA  +Y +M  +G
Sbjct: 160 LLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELVKNNMIREARDVYNKMASKG 219

Query: 514 LSCDSKTYSTLMDGSLKAGNVQFASELYAEMIAKGI----------------KPDVNTCT 645
           +  D  T S ++  S++ G ++ A   + E   KG+                KPD     
Sbjct: 220 VKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCKKPDSVAAL 279

Query: 646 ALVNGVR-------------------KAGQLEDARKVLEELDRKKIPPSVLIYNILIAGY 768
            L+  +R                   K G++ +A KV  E+     P +V++   L+ GY
Sbjct: 280 GLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKGY 339

Query: 769 FKKGNIEEAFRMHDEMLDRGLVPNDATLDILV 864
            K+G+++ A  + D+M + G+ PN+ T  +++
Sbjct: 340 CKQGDLDSALELFDKMNENGICPNNVTYAVII 371


>ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223545497|gb|EEF47002.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 927

 Score =  348 bits (892), Expect = 3e-93
 Identities = 170/294 (57%), Positives = 227/294 (77%), Gaps = 1/294 (0%)
 Frame = +1

Query: 1    TDLTFNTIINGLCKAGRTHEASEILKNFMKDGFTPTCMTYNSIINGFIKEGSVSTALATY 180
            +D T+N  INGLCK GRT EA ++LK F++ GF P C+TYNSI++GFIKEGSVS+AL  Y
Sbjct: 557  SDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAY 616

Query: 181  WEMCESGISSSVVTCTSLIDGCCKSNCLDLALKMLGEMKSRGLQVEVVAYYALIDGFCKK 360
             EMCESG+S +V+T T+LI+G CK+N  DLALKM  EM+++GL++++ AY ALIDGFCKK
Sbjct: 617  REMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKK 676

Query: 361  GYMRGAQALFNELGQVGLTPNTIIYNCLIGGFKNV-NMNEAISLYKRMGKEGLSCDSKTY 537
              +  A  LF+EL   GL+PN++IYN LI G++N+ NM  A++L KRM  EG+SCD +TY
Sbjct: 677  QDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTY 736

Query: 538  STLMDGSLKAGNVQFASELYAEMIAKGIKPDVNTCTALVNGVRKAGQLEDARKVLEELDR 717
            +TL+DG LK G +  A +LY+EM AKGI PD+   T L+NG+   GQLE+A+K+L E++R
Sbjct: 737  TTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMER 796

Query: 718  KKIPPSVLIYNILIAGYFKKGNIEEAFRMHDEMLDRGLVPNDATLDILVNSKFE 879
              I P+V IYN LIAG+FK GN++EAFR+H+EMLD+GL PND T DIL+N K +
Sbjct: 797  DSITPNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGLTPNDTTYDILINGKIK 850



 Score =  154 bits (388), Expect = 7e-35
 Identities = 91/288 (31%), Positives = 149/288 (51%), Gaps = 3/288 (1%)
 Frame = +1

Query: 13   FNTIINGLCKAGRTHEASEILKNFMKDGFTPTCMTYNSIINGFIKEGSVSTALATYWEMC 192
            ++ +I   CK      A  +LK+    G+ P+  T+ S+I   +K+G++  AL    EM 
Sbjct: 282  YSIVIQAFCKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMV 341

Query: 193  ESGISSSVVTCTSLIDGCCKSNCLDLALKMLGEMKSRGLQVEVVAYYALIDGFCKKGYMR 372
              G+  +VV  T+L+ G CK + L  AL+   +M   G     V Y  LI+  CK G M 
Sbjct: 342  SCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMA 401

Query: 373  GAQALFNELGQVGLTPNTIIYNCLIGGFKNVNMNEAISLYKRMGKEGLSCDSK---TYST 543
             A  L+ ++    + P   I N LI GF  V   E  S   ++  E ++CD     TY++
Sbjct: 402  KAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEAS---KLFDEAVACDIANIFTYNS 458

Query: 544  LMDGSLKAGNVQFASELYAEMIAKGIKPDVNTCTALVNGVRKAGQLEDARKVLEELDRKK 723
            L+    K G +  A+ L+ +M+ KG+ P   +  +++ G  + G L+ A  V  ++    
Sbjct: 459  LLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCG 518

Query: 724  IPPSVLIYNILIAGYFKKGNIEEAFRMHDEMLDRGLVPNDATLDILVN 867
            + P+V+ Y+IL+ GYFK G+ E AF + D M+D  +VP+D T +I +N
Sbjct: 519  LKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKIN 566



 Score =  142 bits (357), Expect = 3e-31
 Identities = 92/322 (28%), Positives = 147/322 (45%), Gaps = 35/322 (10%)
 Frame = +1

Query: 7    LTFNTIINGLCKAGRTHEASEILKNFMKDGFTPTCMTYNSIINGFI-------------- 144
            +T+  +I   CK G   +A ++          PT    NS+I GF+              
Sbjct: 385  VTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDE 444

Query: 145  --------------------KEGSVSTALATYWEMCESGISSSVVTCTSLIDGCCKSNCL 264
                                KEG +S A   + +M + G++ + V+  S+I G C+   L
Sbjct: 445  AVACDIANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNL 504

Query: 265  DLALKMLGEMKSRGLQVEVVAYYALIDGFCKKGYMRGAQALFNELGQVGLTPNTIIYNCL 444
            D+A  +  +M   GL+  V+ Y  L+DG+ K G    A  +F+ +    + P+   YN  
Sbjct: 505  DMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIK 564

Query: 445  IGGFKNV-NMNEAISLYKRMGKEGLSCDSKTYSTLMDGSLKAGNVQFASELYAEMIAKGI 621
            I G   V   +EA  + K+  ++G      TY+++MDG +K G+V  A   Y EM   G+
Sbjct: 565  INGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGV 624

Query: 622  KPDVNTCTALVNGVRKAGQLEDARKVLEELDRKKIPPSVLIYNILIAGYFKKGNIEEAFR 801
             P+V T T L+NG  K    + A K+  E+  K +   +  Y  LI G+ KK +IE A  
Sbjct: 625  SPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASW 684

Query: 802  MHDEMLDRGLVPNDATLDILVN 867
            +  E+LD GL PN    + L++
Sbjct: 685  LFSELLDGGLSPNSVIYNSLIS 706



 Score =  136 bits (343), Expect = 1e-29
 Identities = 85/290 (29%), Positives = 143/290 (49%), Gaps = 1/290 (0%)
 Frame = +1

Query: 19   TIINGLCKAGRTHEASEILKNFMKDGFTPTCMTYNSIINGFIKEGSVSTALATYWEMCES 198
            T++ G CK  +   A E      ++G +P  +TY  +I    K G+++ A   Y +M   
Sbjct: 354  TLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNK 413

Query: 199  GISSSVVTCTSLIDGCCKSNCLDLALKMLGEMKSRGLQVEVVAYYALIDGFCKKGYMRGA 378
             I  +V    SLI G  K    + A K+  E  +  +   +  Y +L+   CK+G M  A
Sbjct: 414  NICPTVFIVNSLIRGFLKVESREEASKLFDEAVACDI-ANIFTYNSLLSWLCKEGKMSEA 472

Query: 379  QALFNELGQVGLTPNTIIYNCLI-GGFKNVNMNEAISLYKRMGKEGLSCDSKTYSTLMDG 555
              L+ ++   GL P  + YN +I G  +  N++ A S++  M   GL  +  TYS LMDG
Sbjct: 473  TTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDG 532

Query: 556  SLKAGNVQFASELYAEMIAKGIKPDVNTCTALVNGVRKAGQLEDARKVLEELDRKKIPPS 735
              K G+ ++A  ++  M+ + I P   T    +NG+ K G+  +A+ +L++   K   P 
Sbjct: 533  YFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPV 592

Query: 736  VLIYNILIAGYFKKGNIEEAFRMHDEMLDRGLVPNDATLDILVNSKFEEN 885
             L YN ++ G+ K+G++  A   + EM + G+ PN  T   L+N   + N
Sbjct: 593  CLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNN 642



 Score =  128 bits (322), Expect = 3e-27
 Identities = 77/241 (31%), Positives = 122/241 (50%), Gaps = 1/241 (0%)
 Frame = +1

Query: 13   FNTIINGLCKAGRTHEASEILKNFMKDGFTPTCMTYNSIINGFIKEGSVSTALATYWEMC 192
            +  +I+G CK      AS +    +  G +P  + YNS+I+G+    ++  AL     M 
Sbjct: 666  YGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRML 725

Query: 193  ESGISSSVVTCTSLIDGCCKSNCLDLALKMLGEMKSRGLQVEVVAYYALIDGFCKKGYMR 372
              GIS  + T T+LIDG  K   L LAL +  EM ++G+  +++ Y  LI+G C KG + 
Sbjct: 726  GEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLE 785

Query: 373  GAQALFNELGQVGLTPNTIIYNCLIGG-FKNVNMNEAISLYKRMGKEGLSCDSKTYSTLM 549
             AQ +  E+ +  +TPN  IYN LI G FK  N+ EA  L+  M  +GL+ +  TY  L+
Sbjct: 786  NAQKILAEMERDSITPNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGLTPNDTTYDILI 845

Query: 550  DGSLKAGNVQFASELYAEMIAKGIKPDVNTCTALVNGVRKAGQLEDARKVLEELDRKKIP 729
            +G +K GN    S L +     G             G+++  + +  +KV+E+   K + 
Sbjct: 846  NGKIKGGNSALKS-LLSLKFKDG------------KGMKRINEQDSIKKVIEKAVNKYLR 892

Query: 730  P 732
            P
Sbjct: 893  P 893



 Score =  107 bits (266), Expect = 1e-20
 Identities = 77/320 (24%), Positives = 137/320 (42%), Gaps = 36/320 (11%)
 Frame = +1

Query: 13   FNTIINGLCKAGRTHEASEILKNFMKDGFTPTCMTYNSIINGFIKEGSVSTALATYWEMC 192
            +N ++N   KA + ++A       ++    P     N ++   +K   +  A   Y +M 
Sbjct: 177  YNYLLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTALVKNDMIYEAREVYEKMV 236

Query: 193  ESGISSSVVTCTSLIDGCCKSNCLDLALKMLGEMKSRGLQVEVVAYYALIDGFC------ 354
              G+     T   ++    K N  + A K   E KSRG++++  AY  +I  FC      
Sbjct: 237  LKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQAFCKNLDVE 296

Query: 355  -----------------------------KKGYMRGAQALFNELGQVGLTPNTIIYNCLI 447
                                         K+G M  A  L +E+   G+  N ++   L+
Sbjct: 297  LACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVATTLV 356

Query: 448  GGF-KNVNMNEAISLYKRMGKEGLSCDSKTYSTLMDGSLKAGNVQFASELYAEMIAKGIK 624
             G+ K   +  A+  + +M + G S +  TY+ L++   K GN+  A +LY +M  K I 
Sbjct: 357  KGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNIC 416

Query: 625  PDVNTCTALVNGVRKAGQLEDARKVLEELDRKKIPPSVLIYNILIAGYFKKGNIEEAFRM 804
            P V    +L+ G  K    E+A K+ +E     I  ++  YN L++   K+G + EA  +
Sbjct: 417  PTVFIVNSLIRGFLKVESREEASKLFDEAVACDI-ANIFTYNSLLSWLCKEGKMSEATTL 475

Query: 805  HDEMLDRGLVPNDATLDILV 864
              +MLD+GL P   + + ++
Sbjct: 476  WQKMLDKGLAPTKVSYNSMI 495



 Score = 68.9 bits (167), Expect = 3e-09
 Identities = 51/195 (26%), Positives = 90/195 (46%), Gaps = 1/195 (0%)
 Frame = +1

Query: 283 LGEMKSRGLQVEVVAYYALIDGFCKKGYMRGAQALFNELGQVGLTPNTIIYNCLIGGF-K 459
           +G  K      ++  Y  L++ + K   +  A   FN L +  + P     N L+    K
Sbjct: 162 IGSTKRFDFDSDIRIYNYLLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTALVK 221

Query: 460 NVNMNEAISLYKRMGKEGLSCDSKTYSTLMDGSLKAGNVQFASELYAEMIAKGIKPDVNT 639
           N  + EA  +Y++M  +G+  D  T   +M  +LK  N + A + + E  ++G+K D   
Sbjct: 222 NDMIYEAREVYEKMVLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAA 281

Query: 640 CTALVNGVRKAGQLEDARKVLEELDRKKIPPSVLIYNILIAGYFKKGNIEEAFRMHDEML 819
            + ++    K   +E A  +L+++  K   PS   +  +I    K+GN+ EA R+ DEM+
Sbjct: 282 YSIVIQAFCKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMV 341

Query: 820 DRGLVPNDATLDILV 864
             G+  N      LV
Sbjct: 342 SCGVQMNVVVATTLV 356



 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 37/148 (25%), Positives = 72/148 (48%), Gaps = 1/148 (0%)
 Frame = +1

Query: 430 IYNCLIGGFKNVN-MNEAISLYKRMGKEGLSCDSKTYSTLMDGSLKAGNVQFASELYAEM 606
           IYN L+  +   N +N+AI  + R+ +  +    K  + L+   +K   +  A E+Y +M
Sbjct: 176 IYNYLLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTALVKNDMIYEAREVYEKM 235

Query: 607 IAKGIKPDVNTCTALVNGVRKAGQLEDARKVLEELDRKKIPPSVLIYNILIAGYFKKGNI 786
           + KG+  D  T   ++    K    E+A+K   E   + +      Y+I+I  + K  ++
Sbjct: 236 VLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQAFCKNLDV 295

Query: 787 EEAFRMHDEMLDRGLVPNDATLDILVNS 870
           E A  +  +M D+G VP++ T   ++ +
Sbjct: 296 ELACGLLKDMRDKGWVPSEGTFTSVIGA 323


>ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
            mitochondrial-like [Cucumis sativus]
          Length = 657

 Score =  346 bits (887), Expect = 1e-92
 Identities = 168/294 (57%), Positives = 221/294 (75%), Gaps = 1/294 (0%)
 Frame = +1

Query: 1    TDLTFNTIINGLCKAGRTHEASEILKNFMKDGFTPTCMTYNSIINGFIKEGSVSTALATY 180
            TD T   II GLCKAGR+ E  ++   F+  GF PTCM YN+II+GFIKEG+++ A   Y
Sbjct: 353  TDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVY 412

Query: 181  WEMCESGISSSVVTCTSLIDGCCKSNCLDLALKMLGEMKSRGLQVEVVAYYALIDGFCKK 360
             EMCE GI+ S VT TSLIDG CK N +DLALK+L +MK +GL++++ AY  LIDGFCK+
Sbjct: 413  REMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKR 472

Query: 361  GYMRGAQALFNELGQVGLTPNTIIYNCLIGGFKNV-NMNEAISLYKRMGKEGLSCDSKTY 537
              M+ A  L NEL   GL+PN  IYN +I GFKN+ N+ EAI LYK+M  EG+ CD KTY
Sbjct: 473  RDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTY 532

Query: 538  STLMDGSLKAGNVQFASELYAEMIAKGIKPDVNTCTALVNGVRKAGQLEDARKVLEELDR 717
            ++L+DG LK+G + +AS+++ EM++KGI PD    T L+NG+   GQ E+ARK+LE+++ 
Sbjct: 533  TSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNG 592

Query: 718  KKIPPSVLIYNILIAGYFKKGNIEEAFRMHDEMLDRGLVPNDATLDILVNSKFE 879
            K + PSVLIYN LIAG+FK+GN++EAFR+HDEMLDRGLVP++ T DILVN KF+
Sbjct: 593  KNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNGKFK 646



 Score =  144 bits (364), Expect = 4e-32
 Identities = 86/321 (26%), Positives = 159/321 (49%), Gaps = 35/321 (10%)
 Frame = +1

Query: 10   TFNTIINGLCKAGRTHEASEILKNFMKDGFTPTCMTYNSIINGFIKEGSVSTALATYWEM 189
            TF ++I    K G   EA  +  + +  G +       S++ G+  +G++ +AL    E+
Sbjct: 112  TFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEI 171

Query: 190  CESGISSSVVTCTSLIDGCCKSNCLDLALKMLGEMKSRGLQVEVVAYYALIDGF------ 351
             ESG+  + VT + LIDGCCK+  ++ A +   EMK++G++  V +  ++++G+      
Sbjct: 172  SESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSW 231

Query: 352  ----------------------------CKKGYMRGAQALFNELGQVGLTPNTIIY-NCL 444
                                        CK+G M  A  L++E+   G++PN + Y N +
Sbjct: 232  QNAFTMFNDALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNII 291

Query: 445  IGGFKNVNMNEAISLYKRMGKEGLSCDSKTYSTLMDGSLKAGNVQFASELYAEMIAKGIK 624
            +G  +  N+N A  +YK M   G + ++ T++ LMDG  K G+++ A  ++  M    I 
Sbjct: 292  LGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANIL 351

Query: 625  PDVNTCTALVNGVRKAGQLEDARKVLEELDRKKIPPSVLIYNILIAGYFKKGNIEEAFRM 804
            P   T   ++ G+ KAG+  + R +  +   +   P+ + YN +I G+ K+GNI  A  +
Sbjct: 352  PTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNV 411

Query: 805  HDEMLDRGLVPNDATLDILVN 867
            + EM + G+ P+  T   L++
Sbjct: 412  YREMCEVGITPSTVTYTSLID 432



 Score =  141 bits (356), Expect = 4e-31
 Identities = 87/285 (30%), Positives = 147/285 (51%), Gaps = 1/285 (0%)
 Frame = +1

Query: 13  FNTIINGLCKAGRTHEASEILKNFMKDGFTPTCMTYNSIINGFIKEGSVSTALATYWEMC 192
           ++  ++ LC    +  A  +L+     G+ P   T+ S+I   +KEG+V+ AL    +M 
Sbjct: 78  YSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMV 137

Query: 193 ESGISSSVVTCTSLIDGCCKSNCLDLALKMLGEMKSRGLQVEVVAYYALIDGFCKKGYMR 372
             G S ++   TSL+ G C    L  AL ++ E+   GL    V Y  LIDG CK G + 
Sbjct: 138 NCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIE 197

Query: 373 GAQALFNELGQVGLTPNTIIYNCLIGGF-KNVNMNEAISLYKRMGKEGLSCDSKTYSTLM 549
            A   ++E+   G+  +    N ++ G+ K  +   A +++    + GL+ +  T++TL+
Sbjct: 198 KAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLA-NVFTFNTLL 256

Query: 550 DGSLKAGNVQFASELYAEMIAKGIKPDVNTCTALVNGVRKAGQLEDARKVLEELDRKKIP 729
               K G +  A  L+ E+IAKGI P+V +   ++ G  +   +  A KV +E+      
Sbjct: 257 SWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFT 316

Query: 730 PSVLIYNILIAGYFKKGNIEEAFRMHDEMLDRGLVPNDATLDILV 864
           P+ + + IL+ GYFKKG+IE AF +   M D  ++P D TL I++
Sbjct: 317 PNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIII 361



 Score =  138 bits (347), Expect = 4e-30
 Identities = 87/314 (27%), Positives = 152/314 (48%), Gaps = 36/314 (11%)
 Frame = +1

Query: 7    LTFNTIINGLCKAGRTHEASEILKNFMKDGFTPTCMTYNSIINGFIKEGSVSTALATYWE 186
            +T++ +I+G CK G   +A E        G   +  + NSI+ G++K  S   A   + +
Sbjct: 181  VTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFND 240

Query: 187  MCESGISSSVVTCTSLIDGCCKSNCLDLALKMLGEMKSRGLQVEVVAYYALIDGFCKKGY 366
              ESG+ ++V T  +L+   CK   ++ A  +  E+ ++G+   VV+Y  +I G C+K  
Sbjct: 241  ALESGL-ANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDN 299

Query: 367  MRGAQALFNELGQVGLTPNTIIYNCLIGG-FKNVNMNEAISLYKRMG------------- 504
            +  A  ++ E+   G TPN + +  L+ G FK  ++  A S++ RM              
Sbjct: 300  INAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGI 359

Query: 505  ------KEGLSCDSK----------------TYSTLMDGSLKAGNVQFASELYAEMIAKG 618
                  K G S + +                 Y+T++DG +K GN+  AS +Y EM   G
Sbjct: 360  IIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVG 419

Query: 619  IKPDVNTCTALVNGVRKAGQLEDARKVLEELDRKKIPPSVLIYNILIAGYFKKGNIEEAF 798
            I P   T T+L++G  K   ++ A K+L ++ RK +   +  Y  LI G+ K+ +++ A 
Sbjct: 420  ITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAH 479

Query: 799  RMHDEMLDRGLVPN 840
             + +E+   GL PN
Sbjct: 480  ELLNELRGAGLSPN 493



 Score =  122 bits (306), Expect = 2e-25
 Identities = 81/325 (24%), Positives = 150/325 (46%), Gaps = 36/325 (11%)
 Frame = +1

Query: 16  NTIINGLCKAGRTHEASEILKNFMKDGFTPTCMTYNSIINGFIKEGSVSTALATYWEMCE 195
           N ++  + +   T EA E+    +  G T  C T + ++   +KEG++  A   + +   
Sbjct: 9   NILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAEQHFLQAKA 68

Query: 196 SGISSSVVTCTSLIDGCCKSNCLDLALKMLGEMKSR------------------------ 303
            G+       +  +   C       AL +L EM++                         
Sbjct: 69  RGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAE 128

Query: 304 -----------GLQVEVVAYYALIDGFCKKGYMRGAQALFNELGQVGLTPNTIIYNCLIG 450
                      G  + +    +L+ G+C +G +R A  L NE+ + GL PN + Y+ LI 
Sbjct: 129 ALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLID 188

Query: 451 G-FKNVNMNEAISLYKRMGKEGLSCDSKTYSTLMDGSLKAGNVQFASELYAEMIAKGIKP 627
           G  KN N+ +A   Y  M  +G+     + +++++G LK  + Q A  ++ + +  G+  
Sbjct: 189 GCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGL-A 247

Query: 628 DVNTCTALVNGVRKAGQLEDARKVLEELDRKKIPPSVLIYNILIAGYFKKGNIEEAFRMH 807
           +V T   L++ + K G++ +A  + +E+  K I P+V+ YN +I G+ +K NI  A +++
Sbjct: 248 NVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVY 307

Query: 808 DEMLDRGLVPNDATLDILVNSKFEE 882
            EMLD G  PN  T  IL++  F++
Sbjct: 308 KEMLDNGFTPNAVTFTILMDGYFKK 332