BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014153
         (829 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530313.1| pentatricopeptide repeat-containing protein,...   323   4e-86
emb|CAN77580.1| hypothetical protein VITISV_015346 [Vitis vinifera]   319   4e-85
ref|XP_002278276.1| PREDICTED: pentatricopeptide repeat-containi...   315   6e-84
ref|NP_001154694.1| nucleobase:cation symporter-1, NCS1 family [...   296   5e-78
emb|CAB83319.1| putative protein [Arabidopsis thaliana]               296   5e-78

>ref|XP_002530313.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223530169|gb|EEF32080.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 328

 Score =  323 bits (827), Expect = 4e-86
 Identities = 174/280 (62%), Positives = 212/280 (75%), Gaps = 28/280 (10%)
 Frame = -1

Query: 760 NPSFPPPRFPTLT------------RLFSSRP--RRNTTKTITF-------------SDT 662
           +PS  PP+ P +             R F S+P   + TTKTIT              SD 
Sbjct: 53  SPSRLPPQQPPVLNALAYLQHQNQLRSFCSKPTSEKETTKTITNTKVNFSLSDSDSDSDL 112

Query: 661 DDEDEKNNITKEMEKTKLPPPYDPFNKKPVIEEPNDPEDLQEIFHKMRTEGLINNAIKMF 482
           D ED KN   KE++KTKLPPPYDPFNKKPVIEEP+DP +LQ IFHKMR+EGL+N+A+KMF
Sbjct: 113 DSEDSKN---KEIDKTKLPPPYDPFNKKPVIEEPDDPNNLQLIFHKMRSEGLLNSAVKMF 169

Query: 481 DALSKDGLTHEAMELFGVIKDKGNMPDVVAHTAVIEAYSNAGGHSKEAVKVFLRMLSSGV 302
           DALSKDGLTHEA+ELF  IK+KG+MPDVVA+TAVIEAY+NAGG SKEA+K F+RML++GV
Sbjct: 170 DALSKDGLTHEALELFSQIKNKGHMPDVVAYTAVIEAYANAGGQSKEALKAFMRMLAAGV 229

Query: 301 KPNAYTYSVLIKGLAKDGNLKDAKKYVLDMMDKGIKGPNVGTYTCVFEAFAREEKVDEGK 122
            PNAYTY+VLIKGLA DG L DA KYVL+MM KG++ PN GTY+ VFEA+A+ +KVDE K
Sbjct: 230 APNAYTYTVLIKGLAGDGKLADANKYVLEMMGKGMR-PNAGTYSTVFEAYAKAQKVDEAK 288

Query: 121 ELLEVMKSKGFTPDENAVRDHL-SKRGQVFSSVMNMLFNK 5
            LL+ MK KGF P+E AVR+ L +KRGQVF +V+N+LF+K
Sbjct: 289 LLLQQMKGKGFVPEEKAVREVLNNKRGQVFRTVINILFDK 328


>emb|CAN77580.1| hypothetical protein VITISV_015346 [Vitis vinifera]
          Length = 347

 Score =  319 bits (818), Expect = 4e-85
 Identities = 163/236 (69%), Positives = 198/236 (83%), Gaps = 5/236 (2%)
 Frame = -1

Query: 697 RNTTKTITFSDTDDEDEKNNITK----EMEKTKLPPPYDPFNKKPVIEEPNDPEDLQEIF 530
           R++TK I FS +D + +   + K    E++K+KLPPPYDPF+KKP IEEP DP+DLQ+IF
Sbjct: 115 RSSTK-INFSPSDSDSDSETMIKKTKHEIDKSKLPPPYDPFSKKPAIEEPKDPKDLQDIF 173

Query: 529 HKMRTEGLINNAIKMFDALSKDGLTHEAMELFGVIKDKGNMPDVVAHTAVIEAYSNAGGH 350
           HKMRTEGL+ NA+KMFDALSKDGLTHEAMELF  IKD G+MPDVVAHTAVIEAY+NA G 
Sbjct: 174 HKMRTEGLVPNAVKMFDALSKDGLTHEAMELFAQIKDHGHMPDVVAHTAVIEAYANA-GQ 232

Query: 349 SKEAVKVFLRMLSSGVKPNAYTYSVLIKGLAKDGNLKDAKKYVLDMMDKGIKGPNVGTYT 170
           SKEAVKV++RML+SGV PNAYTYSVLIKGLA D  L +AKKYVL+MM KG++ PN GTYT
Sbjct: 233 SKEAVKVYMRMLTSGVMPNAYTYSVLIKGLAGDAKLGEAKKYVLEMMGKGMR-PNAGTYT 291

Query: 169 CVFEAFAREEKVDEGKELLEVMKSKGFTPDENAVRDHL-SKRGQVFSSVMNMLFNK 5
            +FE FA+E+KV+EG+E LE MK+KGFTPDE AVR+ L ++RGQVF S+M++LF K
Sbjct: 292 ALFEGFAKEQKVEEGREFLEQMKAKGFTPDEKAVREILKNRRGQVFRSIMDILFGK 347


>ref|XP_002278276.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g38150-like [Vitis vinifera]
          Length = 307

 Score =  315 bits (808), Expect = 6e-84
 Identities = 162/236 (68%), Positives = 197/236 (83%), Gaps = 5/236 (2%)
 Frame = -1

Query: 697 RNTTKTITFSDTDDEDEKNNITK----EMEKTKLPPPYDPFNKKPVIEEPNDPEDLQEIF 530
           R++TK I FS +D + +   + K    E++K+KLPPPYDPF+KK  IEEP DP+DLQ+IF
Sbjct: 75  RSSTK-INFSPSDSDSDSETMIKKTKHEIDKSKLPPPYDPFSKKLAIEEPKDPKDLQDIF 133

Query: 529 HKMRTEGLINNAIKMFDALSKDGLTHEAMELFGVIKDKGNMPDVVAHTAVIEAYSNAGGH 350
           HKMRTEGL+ NA+KMFDALSKDGLTHEAMELF  IKD G+MPDVVAHTAVIEAY+NA G 
Sbjct: 134 HKMRTEGLVPNAVKMFDALSKDGLTHEAMELFAQIKDHGHMPDVVAHTAVIEAYANA-GQ 192

Query: 349 SKEAVKVFLRMLSSGVKPNAYTYSVLIKGLAKDGNLKDAKKYVLDMMDKGIKGPNVGTYT 170
           SKEAVKV++RML+SGV PNAYTYSVLIKGLA D  L +AKKYVL+MM KG++ PN GTYT
Sbjct: 193 SKEAVKVYMRMLTSGVMPNAYTYSVLIKGLAGDAKLGEAKKYVLEMMGKGMR-PNAGTYT 251

Query: 169 CVFEAFAREEKVDEGKELLEVMKSKGFTPDENAVRDHL-SKRGQVFSSVMNMLFNK 5
            +FE FA+E+KV+EG+E LE MK+KGFTPDE AVR+ L ++RGQVF S+M++LF K
Sbjct: 252 ALFEGFAKEQKVEEGREFLEQMKAKGFTPDEKAVREILKNRRGQVFRSIMDILFGK 307


>ref|NP_001154694.1| nucleobase:cation symporter-1, NCS1 family [Arabidopsis thaliana]
           gi|332003244|gb|AED90627.1| nucleobase:cation
           symporter-1, NCS1 family [Arabidopsis thaliana]
          Length = 363

 Score =  296 bits (757), Expect = 5e-78
 Identities = 156/245 (63%), Positives = 187/245 (76%), Gaps = 6/245 (2%)
 Frame = -1

Query: 721 RLFSSRPRRNTTKTITFSDTDDEDEKNNITKEMEKTKL----PPPYDPFNKKPVIEEPND 554
           R FSS  +R  TK + FS +DD+ ++   T+  E +K     PPPYDPF+KKP IEEP D
Sbjct: 122 RQFSSETKRVNTK-VNFSLSDDDSDEETETQVTEDSKKQEPPPPPYDPFSKKPAIEEPED 180

Query: 553 PEDLQEIFHKMRTEGLINNAIKMFDALSKDGLTHEAMELFGVIKDKGNMPDVVAHTAVIE 374
           P++LQEIFHKMRTEG  N A+KMFDALSKDG THEA+ELF  IKDK  MPDVVAHTA++E
Sbjct: 181 PKNLQEIFHKMRTEGFTNEAVKMFDALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVE 240

Query: 373 AYSNAGGHSKEAVKVFLRMLSSGVKPNAYTYSVLIKGLAKDGNL-KDAKKYVLDMMDKGI 197
           AY+NA G +KE +KVF+RML+SGV PNAYTYSVLIKGLA DG   KDAKKY+L+MM  G+
Sbjct: 241 AYANA-GQAKETLKVFMRMLASGVSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGM 299

Query: 196 KGPNVGTYTCVFEAFAREEKVDEGKELLEVMKSKGFTPDENAVRDHLS-KRGQVFSSVMN 20
             PN  TYT VFEAF RE K +  +ELL+ MK KGF PDE AVR+ L  KRGQVF +V+N
Sbjct: 300 -SPNAATYTAVFEAFVREGKEESARELLQEMKGKGFVPDEKAVREALEYKRGQVFRTVIN 358

Query: 19  MLFNK 5
           +LF+K
Sbjct: 359 LLFDK 363


>emb|CAB83319.1| putative protein [Arabidopsis thaliana]
          Length = 482

 Score =  296 bits (757), Expect = 5e-78
 Identities = 156/245 (63%), Positives = 187/245 (76%), Gaps = 6/245 (2%)
 Frame = -1

Query: 721 RLFSSRPRRNTTKTITFSDTDDEDEKNNITKEMEKTKL----PPPYDPFNKKPVIEEPND 554
           R FSS  +R  TK + FS +DD+ ++   T+  E +K     PPPYDPF+KKP IEEP D
Sbjct: 103 RQFSSETKRVNTK-VNFSLSDDDSDEETETQVTEDSKKQEPPPPPYDPFSKKPAIEEPED 161

Query: 553 PEDLQEIFHKMRTEGLINNAIKMFDALSKDGLTHEAMELFGVIKDKGNMPDVVAHTAVIE 374
           P++LQEIFHKMRTEG  N A+KMFDALSKDG THEA+ELF  IKDK  MPDVVAHTA++E
Sbjct: 162 PKNLQEIFHKMRTEGFTNEAVKMFDALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVE 221

Query: 373 AYSNAGGHSKEAVKVFLRMLSSGVKPNAYTYSVLIKGLAKDGNL-KDAKKYVLDMMDKGI 197
           AY+NA G +KE +KVF+RML+SGV PNAYTYSVLIKGLA DG   KDAKKY+L+MM  G+
Sbjct: 222 AYANA-GQAKETLKVFMRMLASGVSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGM 280

Query: 196 KGPNVGTYTCVFEAFAREEKVDEGKELLEVMKSKGFTPDENAVRDHLS-KRGQVFSSVMN 20
             PN  TYT VFEAF RE K +  +ELL+ MK KGF PDE AVR+ L  KRGQVF +V+N
Sbjct: 281 -SPNAATYTAVFEAFVREGKEESARELLQEMKGKGFVPDEKAVREALEYKRGQVFRTVIN 339

Query: 19  MLFNK 5
           +LF+K
Sbjct: 340 LLFDK 344