BLASTX nr result

ID: Coptis23_contig00014151 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014151
         (1178 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002262755.1| PREDICTED: peroxisomal 2,4-dienoyl-CoA reduc...   302   e-127
ref|XP_002513357.1| 2,4-dienoyl-CoA reductase, putative [Ricinus...   303   e-125
ref|XP_002275982.1| PREDICTED: peroxisomal 2,4-dienoyl-CoA reduc...   291   e-124
ref|NP_001239792.1| uncharacterized protein LOC100793630 [Glycin...   302   e-124
ref|XP_002884927.1| short-chain dehydrogenase/reductase family p...   294   e-124

>ref|XP_002262755.1| PREDICTED: peroxisomal 2,4-dienoyl-CoA reductase [Vitis vinifera]
           gi|297736138|emb|CBI24176.3| unnamed protein product
           [Vitis vinifera]
          Length = 297

 Score =  302 bits (773), Expect(2) = e-127
 Identities = 144/182 (79%), Positives = 164/182 (90%)
 Frame = -2

Query: 760 VLDIDSVGTFTMCHESLKYLKKGGPGRDSAVGGTILNISATLHYTASWYQIHVSAAKAAV 581
           V+DIDSVGTFTMCHE+LKYLKKGGPGR  + GG+ILNISATLHYTA+WYQIHVSAAKAAV
Sbjct: 116 VMDIDSVGTFTMCHEALKYLKKGGPGRSFSSGGSILNISATLHYTAAWYQIHVSAAKAAV 175

Query: 580 DSITRSLALEWGTDYDIRVNGIAPGPIEGTPGMSKLGPDEAKSKAGDMLPLYKLGERWDI 401
           D+ TR+LALEWGTDYDIRVNGIAPGPI  T GMSKL P+E  +KA +++PLYKLGE+WDI
Sbjct: 176 DATTRNLALEWGTDYDIRVNGIAPGPIGDTAGMSKLAPEEISNKAREIMPLYKLGEKWDI 235

Query: 400 AMAAVYLASDAGKYINGTTLVVDNGLWLSRPRHIQKKVVQEISRAVERRSREAPVGTPTS 221
           AMAA+YLASDAGKYINGTTLVVD GLWLSRPRH+ K+ V+++SRAVE+RSR  PVG P S
Sbjct: 236 AMAALYLASDAGKYINGTTLVVDGGLWLSRPRHLPKEAVKQLSRAVEKRSRGVPVGVPKS 295

Query: 220 KL 215
           KL
Sbjct: 296 KL 297



 Score =  179 bits (454), Expect(2) = e-127
 Identities = 90/113 (79%), Positives = 98/113 (86%)
 Frame = -1

Query: 1127 SPFKEDILKGKVALITGGGSGIGFEISTQLGKHGAFVAIMGRRRNVLDSAVSQLRAQGIQ 948
            SPFK D+LKGKVAL+TGGGSGIGFEISTQ G HGA +AIMGRR+ VLDSAVS L +QGI 
Sbjct: 3    SPFKADVLKGKVALLTGGGSGIGFEISTQFGLHGASIAIMGRRKQVLDSAVSGLCSQGIP 62

Query: 947  AIGLEGDVRKNEDATRVVEMTVKHFGKLDILVNGAAGNFLVPAEDLSPNGFRT 789
            A+G  GDVRK EDA RVVE TVKHFG+LDILVN AAGNFLV +EDLSPNGFRT
Sbjct: 63   AVGFVGDVRKQEDAKRVVESTVKHFGRLDILVNAAAGNFLVSSEDLSPNGFRT 115


>ref|XP_002513357.1| 2,4-dienoyl-CoA reductase, putative [Ricinus communis]
           gi|223547265|gb|EEF48760.1| 2,4-dienoyl-CoA reductase,
           putative [Ricinus communis]
          Length = 297

 Score =  303 bits (775), Expect(2) = e-125
 Identities = 144/182 (79%), Positives = 164/182 (90%)
 Frame = -2

Query: 760 VLDIDSVGTFTMCHESLKYLKKGGPGRDSAVGGTILNISATLHYTASWYQIHVSAAKAAV 581
           V+DID+VGTFTMCHESLKYLK GG GR S+ GGTILNISATLHYTA+WYQIHVSAAKAAV
Sbjct: 116 VMDIDAVGTFTMCHESLKYLKIGGLGRSSSGGGTILNISATLHYTAAWYQIHVSAAKAAV 175

Query: 580 DSITRSLALEWGTDYDIRVNGIAPGPIEGTPGMSKLGPDEAKSKAGDMLPLYKLGERWDI 401
           D+I R+LALEWGTDYDIRVNGIAPGPI  TPGMSKL PD+  SKA D +PLYKLGE+WDI
Sbjct: 176 DAIARNLALEWGTDYDIRVNGIAPGPIGDTPGMSKLAPDDINSKARDYMPLYKLGEKWDI 235

Query: 400 AMAAVYLASDAGKYINGTTLVVDNGLWLSRPRHIQKKVVQEISRAVERRSREAPVGTPTS 221
           AMAA+YLASDAGK++NGTT+VVD GLWLSRPRH+ K  V+++SR VE+RSR+APVG P+S
Sbjct: 236 AMAALYLASDAGKFVNGTTIVVDGGLWLSRPRHLPKDAVKQLSRTVEKRSRDAPVGVPSS 295

Query: 220 KL 215
           KL
Sbjct: 296 KL 297



 Score =  174 bits (441), Expect(2) = e-125
 Identities = 88/113 (77%), Positives = 95/113 (84%)
 Frame = -1

Query: 1127 SPFKEDILKGKVALITGGGSGIGFEISTQLGKHGAFVAIMGRRRNVLDSAVSQLRAQGIQ 948
            SPFK DILKGKVALITGGGSGIGFEISTQ GKHGA VAIMGRR+ VLDSAVS L +  I 
Sbjct: 3    SPFKRDILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDSAVSHLNSLQIP 62

Query: 947  AIGLEGDVRKNEDATRVVEMTVKHFGKLDILVNGAAGNFLVPAEDLSPNGFRT 789
            ++G  GDVRK EDA RV+E T KHFG++DILVN AAGNFLV  EDLSPNGFRT
Sbjct: 63   SVGFVGDVRKQEDAKRVLESTFKHFGRIDILVNAAAGNFLVSPEDLSPNGFRT 115


>ref|XP_002275982.1| PREDICTED: peroxisomal 2,4-dienoyl-CoA reductase [Vitis vinifera]
           gi|147772171|emb|CAN73418.1| hypothetical protein
           VITISV_019955 [Vitis vinifera]
           gi|297737992|emb|CBI27193.3| unnamed protein product
           [Vitis vinifera]
          Length = 297

 Score =  291 bits (746), Expect(2) = e-124
 Identities = 139/182 (76%), Positives = 161/182 (88%)
 Frame = -2

Query: 760 VLDIDSVGTFTMCHESLKYLKKGGPGRDSAVGGTILNISATLHYTASWYQIHVSAAKAAV 581
           V+DIDSVGTFTMCHE+L+YLKKGGPG+  + GG I+NISATLHYTA+WYQIHVSAAKAAV
Sbjct: 116 VIDIDSVGTFTMCHEALQYLKKGGPGKSPSTGGIIINISATLHYTATWYQIHVSAAKAAV 175

Query: 580 DSITRSLALEWGTDYDIRVNGIAPGPIEGTPGMSKLGPDEAKSKAGDMLPLYKLGERWDI 401
           DSITRSLALEWGTDYDIRVNGIAPGPI+ T G+SKL P++   KA +  PL+KLGE+WDI
Sbjct: 176 DSITRSLALEWGTDYDIRVNGIAPGPIDDTAGLSKLAPEDVVRKAKEHEPLFKLGEKWDI 235

Query: 400 AMAAVYLASDAGKYINGTTLVVDNGLWLSRPRHIQKKVVQEISRAVERRSREAPVGTPTS 221
           AMAAVYLAS+AGKYINGTTL VD GLWLS+PRH+ K+ V+++SRAVERRSR+  VG P S
Sbjct: 236 AMAAVYLASNAGKYINGTTLTVDGGLWLSKPRHLSKEAVKQLSRAVERRSRKILVGVPKS 295

Query: 220 KL 215
           KL
Sbjct: 296 KL 297



 Score =  182 bits (461), Expect(2) = e-124
 Identities = 90/113 (79%), Positives = 100/113 (88%)
 Frame = -1

Query: 1127 SPFKEDILKGKVALITGGGSGIGFEISTQLGKHGAFVAIMGRRRNVLDSAVSQLRAQGIQ 948
            SPF+ DILKGKVAL+TGGGSGIG+EIS QLGKHGA +AIMGRRR VLD+AVS L + GI 
Sbjct: 3    SPFRGDILKGKVALLTGGGSGIGYEISRQLGKHGASIAIMGRRRQVLDAAVSSLHSLGIP 62

Query: 947  AIGLEGDVRKNEDATRVVEMTVKHFGKLDILVNGAAGNFLVPAEDLSPNGFRT 789
            AIGLEGDVRK EDA RV+E T+KHFG+LDILVN AAGNFLVPAEDLSP GF+T
Sbjct: 63   AIGLEGDVRKQEDAVRVLESTIKHFGRLDILVNAAAGNFLVPAEDLSPKGFQT 115


>ref|NP_001239792.1| uncharacterized protein LOC100793630 [Glycine max]
           gi|255647355|gb|ACU24144.1| unknown [Glycine max]
          Length = 298

 Score =  302 bits (774), Expect(2) = e-124
 Identities = 143/183 (78%), Positives = 166/183 (90%), Gaps = 1/183 (0%)
 Frame = -2

Query: 760 VLDIDSVGTFTMCHESLKYLKKGGPGR-DSAVGGTILNISATLHYTASWYQIHVSAAKAA 584
           VLDIDSVGTFTMCHE+LKYLKKGG GR +S+ GG+I+NISATLHYTASWYQIHVSAAKAA
Sbjct: 116 VLDIDSVGTFTMCHEALKYLKKGGEGRSNSSSGGSIINISATLHYTASWYQIHVSAAKAA 175

Query: 583 VDSITRSLALEWGTDYDIRVNGIAPGPIEGTPGMSKLGPDEAKSKAGDMLPLYKLGERWD 404
           VD+ TR+LALEWGTDYDIRVNGIAPGPI GTPGMSKL PDE  SKA D +PLYKLGE+WD
Sbjct: 176 VDATTRNLALEWGTDYDIRVNGIAPGPISGTPGMSKLAPDEISSKARDYMPLYKLGEKWD 235

Query: 403 IAMAAVYLASDAGKYINGTTLVVDNGLWLSRPRHIQKKVVQEISRAVERRSREAPVGTPT 224
           IAMAA++LASDAGK++NG T++VD GLWLSRPRH++K+ V+++SR+VE+RSR  PVG P 
Sbjct: 236 IAMAALFLASDAGKFVNGDTMIVDGGLWLSRPRHLEKEAVKQVSRSVEKRSRNVPVGVPK 295

Query: 223 SKL 215
           SKL
Sbjct: 296 SKL 298



 Score =  170 bits (431), Expect(2) = e-124
 Identities = 87/113 (76%), Positives = 95/113 (84%)
 Frame = -1

Query: 1127 SPFKEDILKGKVALITGGGSGIGFEISTQLGKHGAFVAIMGRRRNVLDSAVSQLRAQGIQ 948
            SPFK +ILKGKVALITGG SGIGFEISTQ GKHGA VA+MGRR+ VL SAVS L++  I 
Sbjct: 3    SPFKPEILKGKVALITGGASGIGFEISTQFGKHGASVALMGRRKQVLQSAVSVLQSLVIP 62

Query: 947  AIGLEGDVRKNEDATRVVEMTVKHFGKLDILVNGAAGNFLVPAEDLSPNGFRT 789
            A+G EGDVRK EDA RVVE T KHFG++DILVN AAGNFLV AEDLS NGFRT
Sbjct: 63   AVGFEGDVRKQEDAARVVESTFKHFGRIDILVNAAAGNFLVSAEDLSSNGFRT 115


>ref|XP_002884927.1| short-chain dehydrogenase/reductase family protein [Arabidopsis
           lyrata subsp. lyrata] gi|297330767|gb|EFH61186.1|
           short-chain dehydrogenase/reductase family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 298

 Score =  294 bits (752), Expect(2) = e-124
 Identities = 139/183 (75%), Positives = 164/183 (89%), Gaps = 1/183 (0%)
 Frame = -2

Query: 760 VLDIDSVGTFTMCHESLKYLKKGGPGRDSAVGG-TILNISATLHYTASWYQIHVSAAKAA 584
           VLDID+VGTF MCH +LKYLKKGGPGRDS+ GG +I+NISATLHYTASWYQIHVSAAKAA
Sbjct: 116 VLDIDAVGTFNMCHAALKYLKKGGPGRDSSTGGGSIINISATLHYTASWYQIHVSAAKAA 175

Query: 583 VDSITRSLALEWGTDYDIRVNGIAPGPIEGTPGMSKLGPDEAKSKAGDMLPLYKLGERWD 404
           VD+ TR+LALEWGTDYDIRVNGIAPGPI GTPGMSKL P+E ++K  + +PLYKLGE+WD
Sbjct: 176 VDATTRNLALEWGTDYDIRVNGIAPGPIGGTPGMSKLVPEEIENKTREYMPLYKLGEKWD 235

Query: 403 IAMAAVYLASDAGKYINGTTLVVDNGLWLSRPRHIQKKVVQEISRAVERRSREAPVGTPT 224
           IAMAA+YL+ D+GKY+NG T+VVD GLWLS+PRH+ K+ V+++SRAVE+RSR  PVG PT
Sbjct: 236 IAMAALYLSCDSGKYVNGLTVVVDGGLWLSKPRHLPKEAVKQLSRAVEKRSRAKPVGLPT 295

Query: 223 SKL 215
           SKL
Sbjct: 296 SKL 298



 Score =  179 bits (453), Expect(2) = e-124
 Identities = 88/113 (77%), Positives = 99/113 (87%)
 Frame = -1

Query: 1127 SPFKEDILKGKVALITGGGSGIGFEISTQLGKHGAFVAIMGRRRNVLDSAVSQLRAQGIQ 948
            SPFK D+++G+VALITGGGSGIGFEIS+Q GKHGA +AIMGRR+ VLD AVS LR+ GIQ
Sbjct: 3    SPFKPDVVRGQVALITGGGSGIGFEISSQFGKHGASIAIMGRRKQVLDDAVSALRSLGIQ 62

Query: 947  AIGLEGDVRKNEDATRVVEMTVKHFGKLDILVNGAAGNFLVPAEDLSPNGFRT 789
            AIGLEGDVRK EDA RVVE T +HFG++DILVN AAGNFL  AEDLSPNGFRT
Sbjct: 63   AIGLEGDVRKQEDARRVVEATYQHFGRIDILVNAAAGNFLAAAEDLSPNGFRT 115


Top