BLASTX nr result

ID: Coptis23_contig00014142 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014142
         (1540 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521699.1| AMP dependent ligase, putative [Ricinus comm...   694   0.0  
ref|XP_002521696.1| AMP dependent ligase, putative [Ricinus comm...   687   0.0  
ref|XP_002270022.1| PREDICTED: putative acyl-CoA synthetase YngI...   681   0.0  
ref|XP_002510668.1| AMP dependent ligase, putative [Ricinus comm...   677   0.0  
ref|XP_002307787.1| predicted protein [Populus trichocarpa] gi|2...   671   0.0  

>ref|XP_002521699.1| AMP dependent ligase, putative [Ricinus communis]
            gi|223539090|gb|EEF40686.1| AMP dependent ligase,
            putative [Ricinus communis]
          Length = 544

 Score =  694 bits (1792), Expect = 0.0
 Identities = 336/454 (74%), Positives = 385/454 (84%), Gaps = 4/454 (0%)
 Frame = +2

Query: 191  LQWLSFSQGSYVG---PNVPAMYELHFGVPMAGAVLCTLNIRYNSEMVSRLLRHSEAKII 361
            L  L  S G  V    PNVPAMYELHF VPMAG VLCTLN RY+S MVS LL HSEAKII
Sbjct: 56   LAQLGISHGDVVATLAPNVPAMYELHFAVPMAGGVLCTLNTRYDSNMVSILLDHSEAKII 115

Query: 362  FVDYQLLDIAHGAFKLLSMKETKPPELVLITESDNPIHDSTFTSTSLEYESLLKTGNPDF 541
            FVD+QLLD+A  A +LL+  E K P +VLI+ESD  +  + FTS + EYESLL  GN  F
Sbjct: 116  FVDFQLLDVASKALELLANTERKSPIVVLISESDG-LSPTGFTSNTYEYESLLANGNKGF 174

Query: 542  EIGQPKDELDPISLNYTSGSTSSPKGVVYNHRGAYINSLSTVLLHGMGAMPVYLWTVPMF 721
            EI +PK+E DPIS+NYTSG+TS PKGVVY+HRGAY+NSL+TV LHG+GAMPVYLWTVPMF
Sbjct: 175  EIRRPKNEWDPISVNYTSGTTSRPKGVVYSHRGAYLNSLATVFLHGIGAMPVYLWTVPMF 234

Query: 722  HCNGWCLTWGVAAQGGTNVCLRKVTPKNIYENIMLHKVNHLGGAPTVLNMIVNATPGDRK 901
            HCNGWCLTWGVAAQGGTN+C+RKVTPK I+++I  H V H+GGAPTVLNMIVN+   DR+
Sbjct: 235  HCNGWCLTWGVAAQGGTNICIRKVTPKAIFDSIGQHNVTHMGGAPTVLNMIVNSPVSDRR 294

Query: 902  TLPWKVEIMTGGAPPPPQILFKMEELGFNVSHQYGLTETYGPGTICMWKPEWEFLPPEER 1081
            TLP KVEIMTGGAPPPPQI+FKMEELGF VSH YGLTETYGPGT C WKPEW+ LPP+ER
Sbjct: 295  TLPHKVEIMTGGAPPPPQIIFKMEELGFGVSHLYGLTETYGPGTYCAWKPEWDSLPPDER 354

Query: 1082 AELKSRQGLQHLGVE-VDIKNPITLKSVPPDGKTMGEVMFRGNTVMSGYLKDLKATQEAF 1258
            A+LK+RQG+ HLG+E VD+++P+T +SVP DGKT+GE++FRGNTVMSGYLKDLKAT+EAF
Sbjct: 355  AKLKARQGIHHLGLEDVDVRDPMTQESVPADGKTIGEIVFRGNTVMSGYLKDLKATEEAF 414

Query: 1259 DGGWFRSGDLAVKHPDGYIKVKDRSKDIIISGGENISTIEVETVLYSHPAVLEAAVVGQP 1438
             GGWFRSGDLAVKHPDGYI+VKDR KDIIISGGENIST+EVETVLYSHPA+ EAAVV +P
Sbjct: 415  QGGWFRSGDLAVKHPDGYIEVKDRLKDIIISGGENISTVEVETVLYSHPAIFEAAVVARP 474

Query: 1439 DHHWGETPFAFVKLKEGCSVEAKEIIKFCRDHLP 1540
            D HWG+TP AFVKLKEG  V  ++IIKFCRD LP
Sbjct: 475  DDHWGQTPCAFVKLKEGFVVSEQDIIKFCRDRLP 508


>ref|XP_002521696.1| AMP dependent ligase, putative [Ricinus communis]
            gi|223539087|gb|EEF40683.1| AMP dependent ligase,
            putative [Ricinus communis]
          Length = 480

 Score =  687 bits (1773), Expect = 0.0
 Identities = 328/444 (73%), Positives = 380/444 (85%), Gaps = 1/444 (0%)
 Frame = +2

Query: 212  QGSYVGPNVPAMYELHFGVPMAGAVLCTLNIRYNSEMVSRLLRHSEAKIIFVDYQLLDIA 391
            Q + + PNVPAMYELHF VPMAG VLCTLN RY+S MVS LL HSEA IIFVDYQLLD+A
Sbjct: 2    QVAILAPNVPAMYELHFAVPMAGGVLCTLNTRYDSNMVSVLLEHSEANIIFVDYQLLDVA 61

Query: 392  HGAFKLLSMKETKPPELVLITESDNPIHDSTFTSTSLEYESLLKTGNPDFEIGQPKDELD 571
              A  LL+ +E K P +VLI+ESD  +  + FTS + EYESLL TGN  FEI +PK E D
Sbjct: 62   SKALDLLTKRERKSPIMVLISESDG-LSPTGFTSNTYEYESLLATGNKGFEIRRPKSEWD 120

Query: 572  PISLNYTSGSTSSPKGVVYNHRGAYINSLSTVLLHGMGAMPVYLWTVPMFHCNGWCLTWG 751
            PI++NYTSG+TS PKGVV++HRGAY+NSL+TVLLHG GAMPVYLWTVPMFH NGWCLTWG
Sbjct: 121  PITVNYTSGTTSRPKGVVFSHRGAYLNSLATVLLHGTGAMPVYLWTVPMFHSNGWCLTWG 180

Query: 752  VAAQGGTNVCLRKVTPKNIYENIMLHKVNHLGGAPTVLNMIVNATPGDRKTLPWKVEIMT 931
            +AAQGGTN+C+RKVTP  I+++I  H V H+GGAPTVLNMIVN+   DR+TLP KVEIMT
Sbjct: 181  MAAQGGTNICIRKVTPNAIFDSIGQHNVTHMGGAPTVLNMIVNSPVSDRRTLPHKVEIMT 240

Query: 932  GGAPPPPQILFKMEELGFNVSHQYGLTETYGPGTICMWKPEWEFLPPEERAELKSRQGLQ 1111
            GGAPPPPQI+FKMEELGF VSH YGLTETYGPGT C WKPEW+ LPP+ERA++K+RQG+ 
Sbjct: 241  GGAPPPPQIIFKMEELGFGVSHLYGLTETYGPGTYCAWKPEWDSLPPDERAKVKARQGIH 300

Query: 1112 HLGVE-VDIKNPITLKSVPPDGKTMGEVMFRGNTVMSGYLKDLKATQEAFDGGWFRSGDL 1288
            HLG+E VD+++P+T +SVP DGKT+GEV+FRGNT+MSGYLKDLKAT+EAF GGWFRSGDL
Sbjct: 301  HLGLEDVDVRDPMTQESVPADGKTIGEVVFRGNTIMSGYLKDLKATEEAFQGGWFRSGDL 360

Query: 1289 AVKHPDGYIKVKDRSKDIIISGGENISTIEVETVLYSHPAVLEAAVVGQPDHHWGETPFA 1468
            AVKHPDGYI+VKDR KDIIISGGENIST+EVETVLYSHPA+ EAAVV +PD HWG+TP A
Sbjct: 361  AVKHPDGYIEVKDRLKDIIISGGENISTVEVETVLYSHPAIFEAAVVARPDDHWGQTPCA 420

Query: 1469 FVKLKEGCSVEAKEIIKFCRDHLP 1540
            FVKLKEG  V  ++IIKFCRD LP
Sbjct: 421  FVKLKEGFVVSEQDIIKFCRDRLP 444


>ref|XP_002270022.1| PREDICTED: putative acyl-CoA synthetase YngI-like [Vitis vinifera]
          Length = 566

 Score =  681 bits (1756), Expect = 0.0
 Identities = 326/455 (71%), Positives = 383/455 (84%), Gaps = 8/455 (1%)
 Frame = +2

Query: 200  LSFSQGSYVG---PNVPAMYELHFGVPMAGAVLCTLNIRYNSEMVSRLLRHSEAKIIFVD 370
            L  S+G  V    PN+PAMYELHFGVPMAGAVLCTLNIR++S MVS LL+HSEAK+IFVD
Sbjct: 68   LGISRGDVVAALAPNIPAMYELHFGVPMAGAVLCTLNIRHDSAMVSTLLKHSEAKMIFVD 127

Query: 371  YQLLDIAHGAFKLLSMKETKPPELVLITESDN---PIHDSTFT-STSLEYESLLKTGNPD 538
            YQLLD A GA ++LS   TK P LVLI E D     I +S  T +  LEYE+L+  G  D
Sbjct: 128  YQLLDTAQGALEILSKTRTKLPRLVLIPECDKLQPTISNSGPTVAGDLEYETLIAMGKTD 187

Query: 539  FEIGQPKDELDPISLNYTSGSTSSPKGVVYNHRGAYINSLSTVLLHGMGAMPVYLWTVPM 718
            F+I  P DE DPI+LNYTSG+TS PKGV+Y+HRGA++NSL+ VLL+ MG+MPVYLWTVPM
Sbjct: 188  FDIRWPNDEWDPIALNYTSGTTSRPKGVIYSHRGAHLNSLAAVLLNEMGSMPVYLWTVPM 247

Query: 719  FHCNGWCLTWGVAAQGGTNVCLRKVTPKNIYENIMLHKVNHLGGAPTVLNMIVNATPGDR 898
            FHCNGWCLTWGVAAQGGTNVCLR VT K I+++I  H+V H+GGAPTVLNMI+NA  GD+
Sbjct: 248  FHCNGWCLTWGVAAQGGTNVCLRNVTAKGIFDSISQHRVTHMGGAPTVLNMIINAPVGDQ 307

Query: 899  KTLPWKVEIMTGGAPPPPQILFKMEELGFNVSHQYGLTETYGPGTICMWKPEWEFLPPEE 1078
            + LP KV +MTGGAPPPPQ+LF M+ELGF V H YGLTETYGPGT+C WKPEW+ LPP++
Sbjct: 308  RPLPGKVAVMTGGAPPPPQVLFNMKELGFGVFHSYGLTETYGPGTVCTWKPEWDLLPPDK 367

Query: 1079 RAELKSRQGLQHLGV-EVDIKNPITLKSVPPDGKTMGEVMFRGNTVMSGYLKDLKATQEA 1255
            +A++ +RQGL HLG+ EVDIK+P+T+KSVPPD KT+GEVMFRGNTVM+GYLKD+KAT+E+
Sbjct: 368  QAKINARQGLHHLGMEEVDIKDPVTMKSVPPDAKTIGEVMFRGNTVMNGYLKDIKATEES 427

Query: 1256 FDGGWFRSGDLAVKHPDGYIKVKDRSKDIIISGGENISTIEVETVLYSHPAVLEAAVVGQ 1435
            F GGWFRSGDL VKHPDGYI++KDRSKDIIISGGENISTIEVE VL+SHPA+LEAAVVG+
Sbjct: 428  FKGGWFRSGDLGVKHPDGYIELKDRSKDIIISGGENISTIEVEAVLFSHPAILEAAVVGR 487

Query: 1436 PDHHWGETPFAFVKLKEGCSVEAKEIIKFCRDHLP 1540
            PD HWGETP AFVKLKEGC+  A EIIKFCR+ LP
Sbjct: 488  PDDHWGETPCAFVKLKEGCNANANEIIKFCRNKLP 522


>ref|XP_002510668.1| AMP dependent ligase, putative [Ricinus communis]
            gi|223551369|gb|EEF52855.1| AMP dependent ligase,
            putative [Ricinus communis]
          Length = 551

 Score =  677 bits (1747), Expect = 0.0
 Identities = 319/440 (72%), Positives = 377/440 (85%), Gaps = 1/440 (0%)
 Frame = +2

Query: 224  VGPNVPAMYELHFGVPMAGAVLCTLNIRYNSEMVSRLLRHSEAKIIFVDYQLLDIAHGAF 403
            + PN+PA+YELHFGVPMAGAVLCTLN+R++S MVS LLRHSEAK+IFVD+Q L IA GA 
Sbjct: 70   LAPNIPALYELHFGVPMAGAVLCTLNVRHDSAMVSVLLRHSEAKVIFVDHQFLQIAQGAL 129

Query: 404  KLLSMKETKPPELVLITESDNPIHDSTFTSTSLEYESLLKTGNPDFEIGQPKDELDPISL 583
            ++LS   TK P  VL+ E   P   S+  S  LE+ESLL  G  DFE+ +P DE DPISL
Sbjct: 130  EILSKLGTKLPMFVLVQECGQPTPISS--SGHLEFESLLAMGKLDFEVRRPNDECDPISL 187

Query: 584  NYTSGSTSSPKGVVYNHRGAYINSLSTVLLHGMGAMPVYLWTVPMFHCNGWCLTWGVAAQ 763
            NYTSG+TSSPKGV+Y+HRGAY+NSL+ VLL+ M +MP+YLW VPMFHCNGWCLTWGVAAQ
Sbjct: 188  NYTSGTTSSPKGVIYSHRGAYLNSLAAVLLNDMVSMPIYLWCVPMFHCNGWCLTWGVAAQ 247

Query: 764  GGTNVCLRKVTPKNIYENIMLHKVNHLGGAPTVLNMIVNATPGDRKTLPWKVEIMTGGAP 943
            GGT+VCLR V+PK I+ENI  +KV H+GGAPTVLNMI+NA   D+K LP KV +MTG AP
Sbjct: 248  GGTHVCLRSVSPKGIFENIARYKVTHMGGAPTVLNMIINAPASDQKPLPGKVAVMTGAAP 307

Query: 944  PPPQILFKMEELGFNVSHQYGLTETYGPGTICMWKPEWEFLPPEERAELKSRQGLQHLGV 1123
            PPP++LF MEELGFNV+H YGLTETYGPGT+C WKPEW  LP + +A++K+RQGLQHLG+
Sbjct: 308  PPPRVLFAMEELGFNVTHSYGLTETYGPGTVCTWKPEWTSLPRDVQAKIKARQGLQHLGI 367

Query: 1124 -EVDIKNPITLKSVPPDGKTMGEVMFRGNTVMSGYLKDLKATQEAFDGGWFRSGDLAVKH 1300
             EVDIK+P+T+KSVPPD KT+GEVMFRGNTVM+GYLK+L+AT+EAF GGWFRSGDL VKH
Sbjct: 368  EEVDIKDPVTMKSVPPDAKTIGEVMFRGNTVMNGYLKNLRATEEAFKGGWFRSGDLGVKH 427

Query: 1301 PDGYIKVKDRSKDIIISGGENISTIEVETVLYSHPAVLEAAVVGQPDHHWGETPFAFVKL 1480
            PDGYI++KDRSKDIIISGGENISTIEVE+VL+SHPAVLEAAVVG PD HWGETP AFVKL
Sbjct: 428  PDGYIELKDRSKDIIISGGENISTIEVESVLFSHPAVLEAAVVGSPDDHWGETPCAFVKL 487

Query: 1481 KEGCSVEAKEIIKFCRDHLP 1540
            K+GC+  A+E+IK+CRDHLP
Sbjct: 488  KDGCNASAQELIKYCRDHLP 507


>ref|XP_002307787.1| predicted protein [Populus trichocarpa] gi|222857236|gb|EEE94783.1|
            predicted protein [Populus trichocarpa]
          Length = 552

 Score =  671 bits (1730), Expect = 0.0
 Identities = 321/454 (70%), Positives = 381/454 (83%), Gaps = 4/454 (0%)
 Frame = +2

Query: 191  LQWLSFSQGSYVG---PNVPAMYELHFGVPMAGAVLCTLNIRYNSEMVSRLLRHSEAKII 361
            L  L  S G  V    PN+PAMYELHFGVPMAGAVLCTLN+R++S MVS LL+HSEAK+I
Sbjct: 56   LAHLGISPGDVVAALAPNIPAMYELHFGVPMAGAVLCTLNVRHDSSMVSVLLKHSEAKLI 115

Query: 362  FVDYQLLDIAHGAFKLLSMKETKPPELVLITESDNPIHDSTFTSTSLEYESLLKTGNPDF 541
            FVDYQ L IA GA ++LS ++TK P LVLI E   P   S+     LEYESLL+ G  DF
Sbjct: 116  FVDYQCLPIAQGALEILSERKTKLPLLVLIPECGQPAAISS--PRILEYESLLEKGKLDF 173

Query: 542  EIGQPKDELDPISLNYTSGSTSSPKGVVYNHRGAYINSLSTVLLHGMGAMPVYLWTVPMF 721
            E+ +P+DE DPISLNYTSG+TSSPKGV+Y+HRGAY+NSL+  LL+ M AMPVYLW VPMF
Sbjct: 174  EVRRPRDEWDPISLNYTSGTTSSPKGVIYSHRGAYLNSLAAALLNDMSAMPVYLWCVPMF 233

Query: 722  HCNGWCLTWGVAAQGGTNVCLRKVTPKNIYENIMLHKVNHLGGAPTVLNMIVNATPGDRK 901
            HCNGWCLTW VAAQGGTNVC R VT ++I+ENI  HKV H+ GAPTVLNMI+NA+  +++
Sbjct: 234  HCNGWCLTWAVAAQGGTNVCQRYVTARDIFENIAQHKVTHMSGAPTVLNMIINASASEKR 293

Query: 902  TLPWKVEIMTGGAPPPPQILFKMEELGFNVSHQYGLTETYGPGTICMWKPEWEFLPPEER 1081
             LP KV +MTGGAPPP  +LFKMEELGF+V+H YGLTETYGPGT+C WKPEW  L PE +
Sbjct: 294  PLPGKVAVMTGGAPPPSHVLFKMEELGFHVTHSYGLTETYGPGTVCAWKPEWASLTPEAQ 353

Query: 1082 AELKSRQGLQHLGV-EVDIKNPITLKSVPPDGKTMGEVMFRGNTVMSGYLKDLKATQEAF 1258
            A++KSRQG+QHLG+ E+DIK+P+T+KSVP D KTMGEVMFRGNTVM+GYLK+L+AT++AF
Sbjct: 354  AKIKSRQGVQHLGLEELDIKDPVTMKSVPADAKTMGEVMFRGNTVMNGYLKNLEATKDAF 413

Query: 1259 DGGWFRSGDLAVKHPDGYIKVKDRSKDIIISGGENISTIEVETVLYSHPAVLEAAVVGQP 1438
             GGWFRSGDL VKHPDGYI++KDRSKDIIISGGENIS+IEVE+ L+SHPAVLEAA+VG+P
Sbjct: 414  SGGWFRSGDLGVKHPDGYIELKDRSKDIIISGGENISSIEVESALFSHPAVLEAAIVGRP 473

Query: 1439 DHHWGETPFAFVKLKEGCSVEAKEIIKFCRDHLP 1540
            D +WGETP AFVKLKEGC+  A+E+IKFCRDHLP
Sbjct: 474  DDYWGETPCAFVKLKEGCNANAEELIKFCRDHLP 507


Top