BLASTX nr result

ID: Coptis23_contig00014133 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014133
         (946 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284934.1| PREDICTED: coiled-coil domain-containing pro...   212   9e-53
ref|XP_002309591.1| predicted protein [Populus trichocarpa] gi|2...   195   1e-47
ref|XP_002869263.1| hypothetical protein ARALYDRAFT_491462 [Arab...   191   2e-46
ref|NP_001031771.1| paramyosin-related protein [Arabidopsis thal...   190   5e-46
ref|NP_567897.1| paramyosin-related protein [Arabidopsis thalian...   190   5e-46

>ref|XP_002284934.1| PREDICTED: coiled-coil domain-containing protein 93 [Vitis
           vinifera] gi|296081986|emb|CBI20991.3| unnamed protein
           product [Vitis vinifera]
          Length = 304

 Score =  212 bits (540), Expect = 9e-53
 Identities = 121/199 (60%), Positives = 148/199 (74%), Gaps = 8/199 (4%)
 Frame = -2

Query: 732 LQAHIVQLEKNMSTYKEQKTSSHH--------LEKLNTAKIELAVKLREVLSLKRRLDEV 577
           L+A +V LE+ +++    ++ S+         LE+LN AK ELA +LR +L LKR+LD+V
Sbjct: 105 LKAEVVDLEEKVASGNGSESISNGFDKFLHNCLEELNAAKRELAGRLRAILLLKRQLDDV 164

Query: 576 PCQSELIQYEQRFSELDVQIQEKFRQTRKCYATYNXXXXXXXXXXXETSLLNSITSQFHE 397
           P Q+ELIQYE+RFSEL V IQEK +QTRK YATYN           ETSLLNSI SQF +
Sbjct: 165 PSQTELIQYERRFSELYVHIQEKLQQTRKFYATYNALVEIKELMLKETSLLNSINSQFQD 224

Query: 396 AITSPAGRIKLIDSMEGIVKGTQQKLEKVQLGLQNEQTLCEALKEKYNRSIAEQRRYSSL 217
           AITS AGR+KLI+SMEGIVKG QQKLEKVQLGLQ EQ +C+ALKE+++ +IAEQRR  SL
Sbjct: 225 AITSTAGRLKLINSMEGIVKGAQQKLEKVQLGLQAEQKVCDALKERHSAAIAEQRRCYSL 284

Query: 216 LKALQEERAKYERLRRQTS 160
           LKA QEE  K ERL+RQTS
Sbjct: 285 LKAFQEECTKNERLQRQTS 303


>ref|XP_002309591.1| predicted protein [Populus trichocarpa] gi|222855567|gb|EEE93114.1|
           predicted protein [Populus trichocarpa]
          Length = 296

 Score =  195 bits (496), Expect = 1e-47
 Identities = 114/199 (57%), Positives = 140/199 (70%), Gaps = 8/199 (4%)
 Frame = -2

Query: 732 LQAHIVQLEKNMSTYKEQK--------TSSHHLEKLNTAKIELAVKLREVLSLKRRLDEV 577
           L+A +  LE+ ++   + +          S  LEKLN AK ELA +LR V+S+KR+L EV
Sbjct: 97  LEAEVCNLEEKIAAGMDSEGLCKDLDCLLSESLEKLNAAKKELAARLRAVMSVKRKLGEV 156

Query: 576 PCQSELIQYEQRFSELDVQIQEKFRQTRKCYATYNXXXXXXXXXXXETSLLNSITSQFHE 397
           P QSELIQYE+ FS+++  IQEK RQTRK YATYN           ETSLLNSI+SQF +
Sbjct: 157 PTQSELIQYERGFSDVNDHIQEKHRQTRKYYATYNTLLEIKELMLKETSLLNSISSQFQD 216

Query: 396 AITSPAGRIKLIDSMEGIVKGTQQKLEKVQLGLQNEQTLCEALKEKYNRSIAEQRRYSSL 217
           AIT+  G  KLI SMEGIVKG+QQKL+KV+LGLQ EQ + +ALK++Y  +IAEQRR  SL
Sbjct: 217 AITTTNGCTKLIASMEGIVKGSQQKLQKVELGLQEEQKVSDALKKRYAAAIAEQRRCYSL 276

Query: 216 LKALQEERAKYERLRRQTS 160
           LKA QEE AK ERLR QTS
Sbjct: 277 LKAFQEECAKNERLRGQTS 295


>ref|XP_002869263.1| hypothetical protein ARALYDRAFT_491462 [Arabidopsis lyrata subsp.
           lyrata] gi|297315099|gb|EFH45522.1| hypothetical protein
           ARALYDRAFT_491462 [Arabidopsis lyrata subsp. lyrata]
          Length = 310

 Score =  191 bits (485), Expect = 2e-46
 Identities = 102/167 (61%), Positives = 126/167 (75%)
 Frame = -2

Query: 660 LEKLNTAKIELAVKLREVLSLKRRLDEVPCQSELIQYEQRFSELDVQIQEKFRQTRKCYA 481
           L+ L +AK ELA  LRE++SLKR++D+VPCQSEL+QYE+RFSEL+V IQEK +QTRK YA
Sbjct: 132 LDNLTSAKKELAAALREIVSLKRQIDDVPCQSELLQYERRFSELNVCIQEKLQQTRKLYA 191

Query: 480 TYNXXXXXXXXXXXETSLLNSITSQFHEAITSPAGRIKLIDSMEGIVKGTQQKLEKVQLG 301
           TYN           ETSLLNSI SQF + I +PAGR+KLIDSMEG++KG QQK+ KVQLG
Sbjct: 192 TYNTLLEIKDLMVKETSLLNSIGSQFEDVIGTPAGRVKLIDSMEGVMKGIQQKIGKVQLG 251

Query: 300 LQNEQTLCEALKEKYNRSIAEQRRYSSLLKALQEERAKYERLRRQTS 160
           LQ EQ L +A KEKY  + AEQR+  ++L+A QEE  K E+LR   S
Sbjct: 252 LQEEQRLRDASKEKYVAAAAEQRKCYTVLRAFQEECTKNEKLRSHIS 298


>ref|NP_001031771.1| paramyosin-related protein [Arabidopsis thaliana]
           gi|227202856|dbj|BAH56901.1| AT4G32560 [Arabidopsis
           thaliana] gi|332660680|gb|AEE86080.1| paramyosin-related
           protein [Arabidopsis thaliana]
          Length = 304

 Score =  190 bits (482), Expect = 5e-46
 Identities = 101/167 (60%), Positives = 125/167 (74%)
 Frame = -2

Query: 660 LEKLNTAKIELAVKLREVLSLKRRLDEVPCQSELIQYEQRFSELDVQIQEKFRQTRKCYA 481
           L+ L +AK EL   LRE++SLKR++D+VPCQSEL+QYE+RFSEL+V IQEK +QTRK YA
Sbjct: 132 LDNLTSAKKELGATLREIVSLKRQIDDVPCQSELLQYERRFSELNVCIQEKLQQTRKLYA 191

Query: 480 TYNXXXXXXXXXXXETSLLNSITSQFHEAITSPAGRIKLIDSMEGIVKGTQQKLEKVQLG 301
           TYN           ETSLLNSI SQF + I +PAGR+KLIDSMEG++KG QQK+ K+QLG
Sbjct: 192 TYNALLEIKDLMLKETSLLNSIGSQFQDVIGTPAGRVKLIDSMEGVMKGIQQKIGKIQLG 251

Query: 300 LQNEQTLCEALKEKYNRSIAEQRRYSSLLKALQEERAKYERLRRQTS 160
           LQ EQ L +A KEKY  + AEQR+  ++L+A QEE  K ERLR   S
Sbjct: 252 LQEEQRLRDASKEKYIAAAAEQRKCYTVLRAYQEECTKNERLRSHIS 298


>ref|NP_567897.1| paramyosin-related protein [Arabidopsis thaliana]
           gi|42573131|ref|NP_974662.1| paramyosin-related protein
           [Arabidopsis thaliana] gi|14334642|gb|AAK59499.1|
           unknown protein [Arabidopsis thaliana]
           gi|17104609|gb|AAL34193.1| unknown protein [Arabidopsis
           thaliana] gi|332660678|gb|AEE86078.1| paramyosin-related
           protein [Arabidopsis thaliana]
           gi|332660679|gb|AEE86079.1| paramyosin-related protein
           [Arabidopsis thaliana]
          Length = 306

 Score =  190 bits (482), Expect = 5e-46
 Identities = 101/167 (60%), Positives = 125/167 (74%)
 Frame = -2

Query: 660 LEKLNTAKIELAVKLREVLSLKRRLDEVPCQSELIQYEQRFSELDVQIQEKFRQTRKCYA 481
           L+ L +AK EL   LRE++SLKR++D+VPCQSEL+QYE+RFSEL+V IQEK +QTRK YA
Sbjct: 134 LDNLTSAKKELGATLREIVSLKRQIDDVPCQSELLQYERRFSELNVCIQEKLQQTRKLYA 193

Query: 480 TYNXXXXXXXXXXXETSLLNSITSQFHEAITSPAGRIKLIDSMEGIVKGTQQKLEKVQLG 301
           TYN           ETSLLNSI SQF + I +PAGR+KLIDSMEG++KG QQK+ K+QLG
Sbjct: 194 TYNALLEIKDLMLKETSLLNSIGSQFQDVIGTPAGRVKLIDSMEGVMKGIQQKIGKIQLG 253

Query: 300 LQNEQTLCEALKEKYNRSIAEQRRYSSLLKALQEERAKYERLRRQTS 160
           LQ EQ L +A KEKY  + AEQR+  ++L+A QEE  K ERLR   S
Sbjct: 254 LQEEQRLRDASKEKYIAAAAEQRKCYTVLRAYQEECTKNERLRSHIS 300


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