BLASTX nr result

ID: Coptis23_contig00014127 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014127
         (1137 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514883.1| conserved hypothetical protein [Ricinus comm...   179   1e-42
ref|XP_002303774.1| predicted protein [Populus trichocarpa] gi|2...   177   3e-42
ref|XP_002299324.1| predicted protein [Populus trichocarpa] gi|2...   177   6e-42
ref|XP_002273734.1| PREDICTED: uncharacterized protein LOC100254...   174   3e-41
ref|XP_002284072.1| PREDICTED: uncharacterized protein LOC100254...   163   7e-38

>ref|XP_002514883.1| conserved hypothetical protein [Ricinus communis]
           gi|223545934|gb|EEF47437.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 269

 Score =  179 bits (453), Expect = 1e-42
 Identities = 115/243 (47%), Positives = 155/243 (63%), Gaps = 19/243 (7%)
 Frame = -1

Query: 978 SVIKFLPPTILTLASILSLEDKEVLAYLISRSMKTT-NPF----SFME--EKKNCKRPNT 820
           SV+K LP TILTLAS+LSL+D+EVLAY+I+RS+KTT NP     S ++  +KK+ K  + 
Sbjct: 38  SVLKLLPATILTLASVLSLQDREVLAYMITRSLKTTTNPTPKQASLLQGSKKKSTKNKSP 97

Query: 819 STVKKHKSPIFECGCFECYTSYWFRWDSSVNRELIHQVIEAFEDHLTNTERSPSKRTRGK 640
           +T   HKSP F+C CF+CYTSYWFRWDSS NRELIHQVIEAFE+HL+N E    K +RGK
Sbjct: 98  NT---HKSPSFDCDCFDCYTSYWFRWDSSPNRELIHQVIEAFEEHLSNGELF-KKTSRGK 153

Query: 639 KRDKKFQQPKIVVKSVVDEI-VPQVSELETFV--------VTTAPENEVFFPVLESDGCE 487
           +RDK  +  ++  KSV+D +  P++ E E  V           +P ++V  PV+      
Sbjct: 154 RRDKTGR--RVGDKSVIDVLGRPEMQEPEATVNESSLVGGAVVSPNDDV-SPVV----ML 206

Query: 486 EKLPEPEIVAGNXXXXXXXXXXXXXVLGGG---NNHKGLVRKVMLDVIGLFNSRMLSVWS 316
           E+  + E V G+             V+      NNHKGL RKV+ DV+GLFNSR+ ++W+
Sbjct: 207 ERAADGEEVKGSEESPAEAETEEMAVVARSPPPNNHKGLARKVLPDVLGLFNSRLWNLWN 266

Query: 315 TNV 307
            NV
Sbjct: 267 PNV 269


>ref|XP_002303774.1| predicted protein [Populus trichocarpa] gi|222841206|gb|EEE78753.1|
           predicted protein [Populus trichocarpa]
          Length = 270

 Score =  177 bits (450), Expect = 3e-42
 Identities = 112/237 (47%), Positives = 147/237 (62%), Gaps = 13/237 (5%)
 Frame = -1

Query: 978 SVIKFLPPTILTLASILSLEDKEVLAYLISRSMKTT---NPFSFMEE--KKNCKRP---N 823
           SV+K LP  IL LAS+LSLED+EVLAY+I+RS+KTT   NP SF+++  KK+ K+P   N
Sbjct: 41  SVLKLLPAAILALASVLSLEDREVLAYMITRSLKTTITNNPSSFLQDSKKKSSKKPQNNN 100

Query: 822 TSTVKKHKSPIFECGCFECYTSYWFRWDSSVNRELIHQVIEAFEDHLTNTERSPSKRTRG 643
            S    H++PIF+C CF+CY SYWFRWDSS NRELIHQVIE+FE+HLT+ E S  K  RG
Sbjct: 101 NSQTSNHRAPIFDCDCFDCYRSYWFRWDSSPNRELIHQVIESFEEHLTSGEMS-RKSNRG 159

Query: 642 KKRDKKFQQPKIVVKSVVD-----EIVPQVSELETFVVTTAPENEVFFPVLESDGCEEKL 478
           K+RDK     +   K V+D     EI+P    LET   T+A E+     + E +  EE +
Sbjct: 160 KRRDKTGH--RAGEKPVLDVPGQPEILP---VLET-SNTSAHESPPTGSITEREEMEEAV 213

Query: 477 PEPEIVAGNXXXXXXXXXXXXXVLGGGNNHKGLVRKVMLDVIGLFNSRMLSVWSTNV 307
              + V+                +   + HKGL RKV+ DV+GL NSR+ S+ S NV
Sbjct: 214 KLYDEVSEEVVAAETEVEAAAHGVAVCSRHKGLARKVLPDVLGLLNSRLWSLLSPNV 270


>ref|XP_002299324.1| predicted protein [Populus trichocarpa] gi|222846582|gb|EEE84129.1|
            predicted protein [Populus trichocarpa]
          Length = 277

 Score =  177 bits (448), Expect = 6e-42
 Identities = 116/277 (41%), Positives = 156/277 (56%), Gaps = 28/277 (10%)
 Frame = -1

Query: 1053 KSKGRVYXXXXXXXXXXXXXXP-NLDSVIKFLPPTILTLASILSLEDKEVLAYLISRSMK 877
            K+KG+VY                ++ SV+K LP  IL LAS+LSLED+EVLAY+I+RS+K
Sbjct: 4    KNKGKVYPSPSSSSSSVGDNGDRDVLSVLKLLPAAILALASVLSLEDREVLAYMITRSLK 63

Query: 876  TT---NPFSFMEE--KKNCKRP---NTSTVKKHKSPIFECGCFECYTSYWFRWDSSVNRE 721
            TT   NP   +++  KK+ K+P   N S    H +PIF+C CF+CY SYWFRWDSS NRE
Sbjct: 64   TTTTNNPSPSLQDSKKKSSKKPQNNNNSQRSNHIAPIFDCDCFDCYISYWFRWDSSPNRE 123

Query: 720  LIHQVIEAFEDHLTNTERSPSKRTRGKKRDKKFQQPKIVVKSVVD-----EIVPQVSELE 556
            LIHQVIEAFE+HLT+ E S  K TRGK+RDK  +  ++  KSV+D     E++P +    
Sbjct: 124  LIHQVIEAFEEHLTSDEMS-RKHTRGKRRDKAGR--RVGEKSVLDVPGQPEMIPVLETSN 180

Query: 555  TFVVTTAPENEVFFPVLESDGCEEKLPEPEIVAGN--------------XXXXXXXXXXX 418
            T    ++    V   V  + GC +    PE VA                           
Sbjct: 181  TTSHESSSSCSVADVVNVNVGCPDNGLSPEKVAEREEMEECVKLYDEVPEEVVVAETAAA 240

Query: 417  XXVLGGGNNHKGLVRKVMLDVIGLFNSRMLSVWSTNV 307
               +   ++HKGL RKV+ DV+GL NSR+ ++WS NV
Sbjct: 241  AHGVAVCSHHKGLARKVLPDVLGLLNSRLWNLWSPNV 277


>ref|XP_002273734.1| PREDICTED: uncharacterized protein LOC100254092 [Vitis vinifera]
          Length = 267

 Score =  174 bits (442), Expect = 3e-41
 Identities = 105/239 (43%), Positives = 136/239 (56%), Gaps = 15/239 (6%)
 Frame = -1

Query: 978 SVIKFLPPTILTLASILSLEDKEVLAYLISRSMKTT---NPFSFMEE--KKNCKRPNTST 814
           SV+K LP  IL LAS+LS ED+EVLAY+I+RS+KTT   NP SF ++  KK+ K+P  + 
Sbjct: 32  SVLKLLPAAILVLASVLSAEDREVLAYMITRSIKTTTTTNPCSFSQDSKKKSKKQPPAAA 91

Query: 813 V--------KKHKSPIFECGCFECYTSYWFRWDSSVNRELIHQVIEAFEDHLTNTERSPS 658
                      HK P+F+CGCFECYT YWFRWDSS NRELIHQ IEAFEDHL++ E+   
Sbjct: 92  GGGGGGGGGSAHKPPVFDCGCFECYTCYWFRWDSSPNRELIHQAIEAFEDHLSSGEKPKR 151

Query: 657 KRTRGKKRDKKFQQPKIVVKSVVDEIVPQVSELETFVVTTAPENEVFFPVLESDGCEEKL 478
              RGKK+++  ++       +  ++   V+E E   V    +  V       DGCEE  
Sbjct: 152 IGGRGKKKERVGRRIADKPDDISCQLEMPVAEEEAPEVPNTDDASVAPAPTARDGCEEAK 211

Query: 477 PEPE--IVAGNXXXXXXXXXXXXXVLGGGNNHKGLVRKVMLDVIGLFNSRMLSVWSTNV 307
            E     V G                   +NHKGL RKV+ DV+GL NSR+  +WS NV
Sbjct: 212 AEDNNGDVPGEESAAETSEIVRDT---AASNHKGLARKVLPDVLGLLNSRLWGLWSPNV 267


>ref|XP_002284072.1| PREDICTED: uncharacterized protein LOC100254413 [Vitis vinifera]
          Length = 230

 Score =  163 bits (413), Expect = 7e-38
 Identities = 100/225 (44%), Positives = 126/225 (56%), Gaps = 1/225 (0%)
 Frame = -1

Query: 978 SVIKFLPPTILTLASILSLEDKEVLAYLISRSMKTTNPFSFMEE-KKNCKRPNTSTVKKH 802
           SV K LP TIL LAS LS++D+EVLAY+I+RS+ T NP S +E  KK CK P+       
Sbjct: 25  SVFKLLPATILALASALSVDDREVLAYMITRSITTANPSSIIERHKKKCKTPHNV----Q 80

Query: 801 KSPIFECGCFECYTSYWFRWDSSVNRELIHQVIEAFEDHLTNTERSPSKRTRGKKRDKKF 622
           K P+FECGCF+CY S+WFRWDSS +RELIH  IEAFED LT TE    K  RG+KRDK  
Sbjct: 81  KLPLFECGCFDCYISFWFRWDSSPDRELIHHAIEAFEDQLTTTEFF-KKNGRGRKRDK-- 137

Query: 621 QQPKIVVKSVVDEIVPQVSELETFVVTTAPENEVFFPVLESDGCEEKLPEPEIVAGNXXX 442
               +V +   +       E  T        N +   VLE D   E   E ++       
Sbjct: 138 ----LVGRRDAERSADLTEENRT------EPNRLNDVVLEPDA--EDPGENDLDCDGAEL 185

Query: 441 XXXXXXXXXXVLGGGNNHKGLVRKVMLDVIGLFNSRMLSVWSTNV 307
                          ++HKGL RKV+ DV+GL NSR+ S+WS N+
Sbjct: 186 NGGLEMEVVSASAPASHHKGLARKVLPDVVGLLNSRLWSLWSPNI 230


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