BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00014123
         (424 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004144696.1| PREDICTED: pentatricopeptide repeat-containi...   108   5e-22
ref|XP_004163262.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   106   2e-21
ref|XP_002302563.1| predicted protein [Populus trichocarpa] gi|2...   106   2e-21
ref|XP_003560887.1| PREDICTED: pentatricopeptide repeat-containi...   103   1e-20
emb|CBI37820.3| unnamed protein product [Vitis vinifera]              103   1e-20

>ref|XP_004144696.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 840

 Score =  108 bits (270), Expect = 5e-22
 Identities = 48/99 (48%), Positives = 71/99 (71%)
 Frame = -1

Query: 424 RVHNNVDLAQMAAKELMRLEPDSSAPYVLLYNMHVDAGRWDDAVEIRKMMERNGIRKQPG 245
           RVH N++L + A K L++LEP +S PYVLL NM   AGRW+DA  IR+ M+  GI K+PG
Sbjct: 583 RVHGNLELGERAGKNLIKLEPSNSLPYVLLSNMFSVAGRWEDAAHIRRAMKTMGINKEPG 642

Query: 244 HSWIYLNNNVNVFVASDRSHPLASEIHALTESFDQIVKD 128
           +SWI + + V+ F++ DRSHPLA+EI++  +    ++K+
Sbjct: 643 YSWIEMKSQVHTFISEDRSHPLAAEIYSKIDEMMILIKE 681


>ref|XP_004163262.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g33170-like [Cucumis sativus]
          Length = 840

 Score =  106 bits (265), Expect = 2e-21
 Identities = 47/99 (47%), Positives = 71/99 (71%)
 Frame = -1

Query: 424 RVHNNVDLAQMAAKELMRLEPDSSAPYVLLYNMHVDAGRWDDAVEIRKMMERNGIRKQPG 245
           RVH N++L + A K L++LEP +S PYVLL NM   AGRW+DA  IR+ M+  GI ++PG
Sbjct: 583 RVHGNLELGERAGKNLIKLEPSNSLPYVLLSNMFSVAGRWEDAAHIRRAMKTMGIXQEPG 642

Query: 244 HSWIYLNNNVNVFVASDRSHPLASEIHALTESFDQIVKD 128
           +SWI + + V+ F++ DRSHPLA+EI++  +    ++K+
Sbjct: 643 YSWIEMKSQVHTFISEDRSHPLAAEIYSKIDEMMILIKE 681


>ref|XP_002302563.1| predicted protein [Populus trichocarpa] gi|222844289|gb|EEE81836.1|
           predicted protein [Populus trichocarpa]
          Length = 514

 Score =  106 bits (264), Expect = 2e-21
 Identities = 46/99 (46%), Positives = 70/99 (70%)
 Frame = -1

Query: 424 RVHNNVDLAQMAAKELMRLEPDSSAPYVLLYNMHVDAGRWDDAVEIRKMMERNGIRKQPG 245
           RVH  ++L +MAAK L  LEP +S PYV+L NM+  AG+W+DA  IR++M   GI K+PG
Sbjct: 322 RVHKELELGEMAAKNLFELEPMNSMPYVMLSNMYSAAGKWEDAARIRRLMRSRGICKEPG 381

Query: 244 HSWIYLNNNVNVFVASDRSHPLASEIHALTESFDQIVKD 128
           +SWI  N+ V+ F++ DR+HPL +EI++  +    ++K+
Sbjct: 382 YSWIETNSKVSTFMSEDRNHPLRNEIYSKIDEIIMLIKE 420


>ref|XP_003560887.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
           mitochondrial-like [Brachypodium distachyon]
          Length = 676

 Score =  103 bits (258), Expect = 1e-20
 Identities = 46/92 (50%), Positives = 66/92 (71%)
 Frame = -1

Query: 403 LAQMAAKELMRLEPDSSAPYVLLYNMHVDAGRWDDAVEIRKMMERNGIRKQPGHSWIYLN 224
           LA MAAK L +++P+SSAPYVL++N+H   GRW  A  +R+ ME+ GI K PG+SWI L+
Sbjct: 583 LAHMAAKALSKIDPESSAPYVLIHNLHAHEGRWGSASVVREEMEQQGIHKHPGYSWIDLH 642

Query: 223 NNVNVFVASDRSHPLASEIHALTESFDQIVKD 128
           + V+VF++ D SHPL  EI ++ + FD   +D
Sbjct: 643 DKVHVFISGDTSHPLTQEIFSVLKCFDMSSRD 674


>emb|CBI37820.3| unnamed protein product [Vitis vinifera]
          Length = 504

 Score =  103 bits (258), Expect = 1e-20
 Identities = 45/64 (70%), Positives = 58/64 (90%)
 Frame = -1

Query: 424 RVHNNVDLAQMAAKELMRLEPDSSAPYVLLYNMHVDAGRWDDAVEIRKMMERNGIRKQPG 245
           RVHNNV+LA++AA+ LM+LEP+SSAPYVLL+NM+ D G+WD+A E+R MMERN IRKQPG
Sbjct: 435 RVHNNVELARVAAEALMKLEPESSAPYVLLHNMYADVGQWDNATEMRMMMERNNIRKQPG 494

Query: 244 HSWI 233
           +SW+
Sbjct: 495 YSWV 498